Wall clock time and date at job start Sun Mar 7 2021 01:29:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42891 * 1 3 3 C 1.35963 * 117.00381 * 2 1 4 4 C 1.39451 * 120.12556 * 179.72517 * 3 2 1 5 5 O 1.34773 * 133.24186 * 0.29021 * 4 3 2 6 6 C 1.34934 * 110.84410 * 180.02562 * 5 4 3 7 7 C 1.46990 * 125.14392 * 179.97438 * 6 5 4 8 8 O 1.21652 * 120.00304 * 180.02562 * 7 6 5 9 9 N 1.34781 * 119.99750 * 0.02562 * 7 6 5 10 10 C 1.46498 * 119.99606 * 179.97438 * 9 7 6 11 11 H 1.09000 * 112.85018 * 23.80978 * 10 9 7 12 12 C 1.53781 * 113.61063 * 155.00196 * 10 9 7 13 13 C 1.53784 * 87.08341 * 139.98182 * 12 10 9 14 14 H 1.09004 * 113.61562 * 89.11312 * 13 12 10 15 15 C 1.52994 * 113.61846 * 219.93536 * 13 12 10 16 16 N 1.46496 * 109.47365 * 184.99627 * 15 13 12 17 17 C 1.36882 * 126.39989 * 269.71400 * 16 15 13 18 18 C 1.34671 * 106.81672 * 179.83836 * 17 16 15 19 19 N 1.34131 * 108.02147 * 0.42586 * 18 17 16 20 20 C 1.30501 * 109.25314 * 359.72799 * 19 18 17 21 21 C 1.53782 * 113.61488 * 252.49569 * 10 9 7 22 22 C 1.35814 * 109.71369 * 359.97438 * 6 5 4 23 23 C 1.40612 * 119.13701 * 180.27712 * 4 3 2 24 24 C 1.39773 * 120.12169 * 0.02562 * 23 4 3 25 25 C 1.50697 * 120.09438 * 179.97438 * 24 23 4 26 26 O 1.42899 * 109.47171 * 75.02190 * 25 24 23 27 27 Si 1.86301 * 109.47215 * 195.02195 * 25 24 23 28 28 C 1.36631 * 119.81239 * 359.97438 * 24 23 4 29 29 C 1.38265 * 120.12061 * 359.97438 * 3 2 1 30 30 H 1.09003 * 109.47439 * 180.02562 * 1 2 3 31 31 H 1.09005 * 109.47413 * 300.00687 * 1 2 3 32 32 H 1.08998 * 109.46782 * 60.00126 * 1 2 3 33 33 H 0.96997 * 120.00007 * 0.02562 * 9 7 6 34 34 H 1.08999 * 113.61702 * 254.52594 * 12 10 9 35 35 H 1.08998 * 113.61516 * 25.43305 * 12 10 9 36 36 H 1.09004 * 109.47269 * 305.00308 * 15 13 12 37 37 H 1.09012 * 109.47074 * 64.99783 * 15 13 12 38 38 H 1.07996 * 126.59302 * 359.97438 * 17 16 15 39 39 H 1.08006 * 125.98929 * 180.11545 * 18 17 16 40 40 H 1.07999 * 125.64294 * 179.97438 * 20 19 18 41 41 H 1.08998 * 113.61565 * 334.57330 * 21 10 9 42 42 H 1.09001 * 113.60967 * 105.47857 * 21 10 9 43 43 H 1.08006 * 126.95056 * 179.97438 * 22 6 5 44 44 H 1.09002 * 109.46952 * 315.02362 * 25 24 23 45 45 H 0.96703 * 114.00123 * 59.99949 * 26 25 24 46 46 H 1.48500 * 109.99846 * 58.67927 * 27 25 24 47 47 H 1.48504 * 110.00057 * 179.97438 * 27 25 24 48 48 H 1.08002 * 119.75698 * 179.97438 * 28 24 23 49 49 H 1.07995 * 119.65574 * 359.72474 * 29 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0463 1.2114 0.0000 4 6 3.4387 1.2874 0.0058 5 8 4.4141 0.3573 0.0070 6 6 5.6318 0.9386 0.0141 7 6 6.9132 0.2185 0.0179 8 8 7.9596 0.8389 0.0248 9 7 6.9287 -1.1292 0.0136 10 6 8.2059 -1.8469 0.0168 11 1 9.0233 -1.2545 0.4277 12 6 8.1146 -3.2639 0.6074 13 6 9.0682 -3.7079 -0.5144 14 1 10.1224 -3.6247 -0.2499 15 6 8.7129 -5.0679 -1.1184 16 7 9.7405 -5.4552 -2.0880 17 6 9.7420 -5.1714 -3.4271 18 6 10.8667 -5.7080 -3.9378 19 7 11.5290 -6.3113 -2.9396 20 6 10.8604 -6.1640 -1.8286 21 6 8.5410 -2.5139 -1.3277 22 6 5.4944 2.2898 0.0173 23 6 4.0554 2.5510 0.0116 24 6 3.2766 3.7116 0.0121 25 6 3.9381 5.0656 0.0189 26 8 4.4653 5.3447 -1.2796 27 14 2.6848 6.3669 0.4732 28 6 1.9137 3.6151 0.0064 29 6 1.2957 2.3726 -0.0005 30 1 -0.3634 -1.0277 0.0005 31 1 -0.3634 0.5140 0.8899 32 1 -0.3633 0.5138 -0.8900 33 1 6.0944 -1.6239 0.0077 34 1 8.5447 -3.3496 1.6053 35 1 7.1201 -3.7040 0.5347 36 1 8.6607 -5.8149 -0.3263 37 1 7.7470 -5.0018 -1.6196 38 1 8.9876 -4.6209 -3.9693 39 1 11.1780 -5.6648 -4.9711 40 1 11.1539 -6.5460 -0.8621 41 1 7.6631 -2.7490 -1.9294 42 1 9.3153 -1.9941 -1.8919 43 1 6.2874 3.0230 0.0233 44 1 4.7479 5.0706 0.7486 45 1 3.7991 5.3562 -1.9805 46 1 2.1058 6.0703 1.8082 47 1 3.3250 7.7069 0.4841 48 1 1.3127 4.5125 0.0072 49 1 0.2175 2.3120 -0.0055 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14468608_6672420.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:29:39 Heat of formation + Delta-G solvation = 30.497576 kcal Electronic energy + Delta-G solvation = -34244.853778 eV Core-core repulsion = 29529.099294 eV Total energy + Delta-G solvation = -4715.754484 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 384.156 amu Computer time = 1.40 seconds Orbital eigenvalues (eV) -43.80101 -42.94799 -41.35603 -40.61412 -39.58962 -39.08656 -37.02082 -35.58609 -34.12302 -33.69693 -31.94148 -31.07130 -30.41463 -28.98577 -28.40198 -26.80355 -26.36746 -25.63190 -24.02336 -23.59123 -22.27060 -22.08141 -21.82670 -21.69590 -20.89411 -19.70053 -19.03791 -18.60383 -18.42489 -17.86753 -17.75068 -17.44366 -16.96932 -16.62671 -16.47518 -16.23695 -16.15056 -15.89687 -15.76062 -15.58151 -15.18585 -14.86008 -14.75260 -14.56863 -14.50760 -14.30884 -14.19971 -14.15152 -13.62099 -13.59301 -13.50562 -13.41266 -13.29386 -12.97025 -12.44112 -12.40853 -12.29864 -12.10504 -12.04392 -11.92725 -11.64346 -11.48430 -11.05912 -10.92440 -10.51428 -10.46311 -10.33463 -9.85899 -9.44598 -9.02908 -5.01623 -0.72299 0.07737 0.56067 1.11192 1.16212 1.28832 1.66786 1.80463 1.84005 1.95516 1.99321 2.12306 2.23431 2.37649 3.13317 3.31729 3.39899 3.41294 3.60772 3.64026 3.66664 3.69366 3.77928 3.84760 3.89770 3.94704 4.01179 4.12647 4.15605 4.18927 4.32980 4.38284 4.39858 4.43418 4.43732 4.58635 4.64567 4.66533 4.73090 4.77537 4.79063 4.79612 4.84224 4.87229 4.97746 5.02197 5.02585 5.19382 5.29052 5.35024 5.41737 5.55256 5.82725 6.15098 6.26393 6.32532 6.76111 6.77172 7.16545 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.013 3.987 2 O -0.333 6.333 3 C 0.137 3.863 4 C 0.021 3.979 5 O -0.178 6.178 6 C -0.033 4.033 7 C 0.602 3.398 8 O -0.549 6.549 9 N -0.690 5.690 10 C 0.110 3.890 11 H 0.100 0.900 12 C -0.117 4.117 13 C -0.114 4.114 14 H 0.094 0.906 15 C 0.114 3.886 16 N -0.453 5.453 17 C -0.046 4.046 18 C -0.067 4.067 19 N -0.546 5.546 20 C 0.174 3.826 21 C -0.144 4.144 22 C -0.118 4.118 23 C -0.099 4.099 24 C -0.109 4.109 25 C -0.081 4.081 26 O -0.555 6.555 27 Si 0.796 3.204 28 C -0.078 4.078 29 C -0.165 4.165 30 H 0.115 0.885 31 H 0.074 0.926 32 H 0.077 0.923 33 H 0.419 0.581 34 H 0.091 0.909 35 H 0.115 0.885 36 H 0.121 0.879 37 H 0.111 0.889 38 H 0.195 0.805 39 H 0.170 0.830 40 H 0.229 0.771 41 H 0.101 0.899 42 H 0.057 0.943 43 H 0.167 0.833 44 H 0.096 0.904 45 H 0.396 0.604 46 H -0.279 1.279 47 H -0.302 1.302 48 H 0.176 0.824 49 H 0.184 0.816 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -13.514 -0.615 1.466 13.608 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 O -0.247 6.247 3 C 0.091 3.909 4 C -0.027 4.027 5 O -0.081 6.081 6 C -0.083 4.083 7 C 0.388 3.612 8 O -0.428 6.428 9 N -0.340 5.340 10 C 0.006 3.994 11 H 0.118 0.882 12 C -0.155 4.155 13 C -0.134 4.134 14 H 0.112 0.888 15 C -0.007 4.007 16 N -0.135 5.135 17 C -0.180 4.180 18 C -0.214 4.214 19 N -0.265 5.265 20 C -0.109 4.109 21 C -0.183 4.183 22 C -0.138 4.138 23 C -0.100 4.100 24 C -0.110 4.110 25 C -0.189 4.189 26 O -0.363 6.363 27 Si 0.701 3.299 28 C -0.096 4.096 29 C -0.183 4.183 30 H 0.134 0.866 31 H 0.093 0.907 32 H 0.096 0.904 33 H 0.257 0.743 34 H 0.110 0.890 35 H 0.134 0.866 36 H 0.139 0.861 37 H 0.129 0.871 38 H 0.212 0.788 39 H 0.188 0.812 40 H 0.245 0.755 41 H 0.119 0.881 42 H 0.076 0.924 43 H 0.184 0.816 44 H 0.114 0.886 45 H 0.246 0.754 46 H -0.206 1.206 47 H -0.230 1.230 48 H 0.193 0.807 49 H 0.201 0.799 Dipole moment (debyes) X Y Z Total from point charges -11.776 -0.456 2.386 12.023 hybrid contribution -0.025 0.100 0.114 0.154 sum -11.800 -0.356 2.500 12.068 Atomic orbital electron populations 1.23498 0.75241 1.06053 1.03241 1.86139 1.24359 1.25737 1.88427 1.17983 0.85979 0.86972 0.99938 1.19214 0.88309 0.86982 1.08211 1.83998 1.12580 1.34951 1.76523 1.21928 0.84133 0.92639 1.09593 1.16734 0.84869 0.83126 0.76512 1.90897 1.31566 1.68408 1.51962 1.45837 1.11085 1.04599 1.72481 1.22723 0.85662 0.92585 0.98447 0.88174 1.23321 1.01370 0.91953 0.98890 1.22644 1.00559 0.93130 0.97048 0.88813 1.22175 0.90026 0.96748 0.91733 1.45739 1.19326 1.40211 1.08187 1.23063 1.02892 1.07540 0.84502 1.22614 0.95248 1.03818 0.99707 1.70244 1.32070 1.24004 1.00196 1.25529 0.85841 0.99211 1.00271 1.23578 1.01672 0.96467 0.96590 1.22848 0.95510 0.94561 1.00914 1.19590 0.92239 0.93051 1.05168 1.19681 0.93823 0.93889 1.03573 1.25365 1.05806 0.98682 0.89087 1.86506 1.39699 1.93275 1.16861 0.93850 0.80274 0.73091 0.82711 1.20800 0.92381 0.98689 0.97688 1.21440 1.02011 0.89514 1.05356 0.86647 0.90724 0.90419 0.74290 0.89022 0.86640 0.86129 0.87093 0.78797 0.81241 0.75504 0.88066 0.92449 0.81574 0.88629 0.75420 1.20597 1.22988 0.80739 0.79871 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.12 9.81 113.37 1.11 0.99 16 2 O -0.33 -0.19 10.50 -93.14 -0.98 -1.17 16 3 C 0.14 0.20 6.70 22.57 0.15 0.35 16 4 C 0.02 0.13 7.35 23.14 0.17 0.30 16 5 O -0.18 -1.24 10.28 -13.44 -0.14 -1.38 16 6 C -0.03 -0.25 7.07 24.00 0.17 -0.08 16 7 C 0.60 4.54 7.80 86.54 0.67 5.21 16 8 O -0.55 -7.98 16.42 -4.20 -0.07 -8.04 16 9 N -0.69 0.16 5.35 -443.71 -2.37 -2.21 16 10 C 0.11 -0.27 4.24 45.52 0.19 -0.08 16 11 H 0.10 0.23 7.46 -2.39 -0.02 0.22 16 12 C -0.12 1.11 7.39 31.12 0.23 1.34 16 13 C -0.11 0.89 3.96 -10.27 -0.04 0.85 16 14 H 0.09 -0.46 8.14 -2.38 -0.02 -0.48 16 15 C 0.11 -1.06 5.99 86.38 0.52 -0.54 16 16 N -0.45 0.64 2.75 -529.07 -1.46 -0.82 16 17 C -0.05 -0.06 11.58 83.09 0.96 0.90 16 18 C -0.07 -0.49 11.87 83.52 0.99 0.51 16 19 N -0.55 -5.82 11.25 -200.30 -2.25 -8.08 16 20 C 0.17 0.50 12.56 180.26 2.26 2.77 16 21 C -0.14 0.60 7.43 31.12 0.23 0.84 16 22 C -0.12 -0.99 10.68 23.79 0.25 -0.74 16 23 C -0.10 -0.60 6.16 -20.25 -0.12 -0.72 16 24 C -0.11 -0.07 5.26 -19.87 -0.10 -0.18 16 25 C -0.08 -0.01 2.70 71.24 0.19 0.18 16 26 O -0.56 -0.70 12.88 -148.98 -1.92 -2.62 16 27 Si 0.80 -3.32 29.93 68.60 2.05 -1.26 16 28 C -0.08 0.41 8.62 22.02 0.19 0.60 16 29 C -0.16 0.84 9.03 22.40 0.20 1.04 16 30 H 0.12 -1.28 8.14 -2.39 -0.02 -1.30 16 31 H 0.07 -0.86 7.66 -2.38 -0.02 -0.88 16 32 H 0.08 -0.94 7.65 -2.39 -0.02 -0.95 16 33 H 0.42 -1.94 8.44 -92.71 -0.78 -2.72 16 34 H 0.09 -0.89 8.14 -2.39 -0.02 -0.91 16 35 H 0.12 -1.54 8.08 -2.39 -0.02 -1.56 16 36 H 0.12 -1.57 8.14 -2.39 -0.02 -1.59 16 37 H 0.11 -1.32 7.85 -2.38 -0.02 -1.34 16 38 H 0.20 -0.87 8.06 -2.91 -0.02 -0.89 16 39 H 0.17 0.78 8.06 -2.91 -0.02 0.76 16 40 H 0.23 -0.98 8.06 -2.91 -0.02 -1.00 16 41 H 0.10 -0.66 7.90 -2.39 -0.02 -0.67 16 42 H 0.06 0.03 8.14 -2.39 -0.02 0.01 16 43 H 0.17 1.44 8.06 -2.91 -0.02 1.41 16 44 H 0.10 0.29 7.96 -2.39 -0.02 0.27 16 45 H 0.40 -3.09 8.70 -74.06 -0.64 -3.73 16 46 H -0.28 -0.01 7.11 99.48 0.71 0.70 16 47 H -0.30 -1.25 7.11 99.48 0.71 -0.55 16 48 H 0.18 -2.21 5.08 -2.91 -0.01 -2.23 16 49 H 0.18 -2.30 6.26 -2.91 -0.02 -2.32 16 Total: 0.00 -32.55 415.78 0.73 -31.82 By element: Atomic # 1 Polarization: -19.39 SS G_CDS: -0.37 Total: -19.76 kcal Atomic # 6 Polarization: 5.29 SS G_CDS: 8.24 Total: 13.52 kcal Atomic # 7 Polarization: -5.02 SS G_CDS: -6.08 Total: -11.11 kcal Atomic # 8 Polarization: -10.11 SS G_CDS: -3.10 Total: -13.21 kcal Atomic # 14 Polarization: -3.32 SS G_CDS: 2.05 Total: -1.26 kcal Total: -32.55 0.73 -31.82 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14468608_6672420.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 62.315 kcal (2) G-P(sol) polarization free energy of solvation -32.552 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 29.763 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.735 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.818 kcal (6) G-S(sol) free energy of system = (1) + (5) 30.498 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.41 seconds