Wall clock time and date at job start Sun Mar 7 2021 04:17:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52994 * 1 3 3 C 1.52998 * 109.47257 * 2 1 4 4 C 1.53006 * 109.46937 * 240.00324 * 2 1 3 5 5 O 1.45196 * 109.47572 * 120.00294 * 2 1 3 6 6 C 1.34644 * 116.99750 * 59.99709 * 5 2 1 7 7 O 1.21503 * 119.99901 * 359.72883 * 6 5 2 8 8 N 1.34777 * 119.99831 * 179.97438 * 6 5 2 9 9 C 1.46496 * 119.99875 * 179.97438 * 8 6 5 10 10 H 1.08999 * 112.85295 * 336.20319 * 9 8 6 11 11 C 1.53782 * 113.61172 * 107.50721 * 9 8 6 12 12 C 1.53778 * 87.08331 * 139.98114 * 11 9 8 13 13 H 1.08999 * 113.61632 * 89.11422 * 12 11 9 14 14 C 1.50704 * 113.61711 * 220.02038 * 12 11 9 15 15 O 1.21283 * 120.00279 * 97.49222 * 14 12 11 16 16 N 1.34772 * 120.00055 * 277.49693 * 14 12 11 17 17 N 1.40101 * 120.00239 * 179.97438 * 16 14 12 18 18 C 1.34778 * 119.99771 * 179.97438 * 17 16 14 19 19 O 1.21564 * 120.00522 * 0.02562 * 18 17 16 20 20 C 1.47698 * 119.99643 * 179.97438 * 18 17 16 21 21 C 1.39806 * 120.15478 * 179.72093 * 20 18 17 22 22 F 1.35095 * 120.08138 * 0.02827 * 21 20 18 23 23 C 1.38311 * 119.83160 * 179.79173 * 21 20 18 24 24 C 1.38188 * 120.14223 * 0.46756 * 23 21 20 25 25 C 1.50710 * 119.83790 * 179.76382 * 24 23 21 26 26 O 1.42899 * 109.46669 * 255.02278 * 25 24 23 27 27 Si 1.86299 * 109.47247 * 15.02621 * 25 24 23 28 28 C 1.38649 * 120.31896 * 359.79160 * 24 23 21 29 29 F 1.35102 * 119.91728 * 179.97438 * 28 24 23 30 30 C 1.38070 * 120.16328 * 359.97060 * 28 24 23 31 31 C 1.53785 * 113.61222 * 204.99888 * 9 8 6 32 32 H 1.09007 * 109.47040 * 299.99803 * 1 2 3 33 33 H 1.08994 * 109.47761 * 59.99432 * 1 2 3 34 34 H 1.09005 * 109.47416 * 180.02562 * 1 2 3 35 35 H 1.08998 * 109.47592 * 180.02562 * 3 2 1 36 36 H 1.09003 * 109.46949 * 300.00360 * 3 2 1 37 37 H 1.08999 * 109.47084 * 60.00407 * 3 2 1 38 38 H 1.08996 * 109.47190 * 300.00101 * 4 2 1 39 39 H 1.09003 * 109.47272 * 59.99639 * 4 2 1 40 40 H 1.08996 * 109.47211 * 180.02562 * 4 2 1 41 41 H 0.97004 * 119.99528 * 0.02562 * 8 6 5 42 42 H 1.08994 * 113.61718 * 254.52855 * 11 9 8 43 43 H 1.09006 * 113.61473 * 25.43093 * 11 9 8 44 44 H 0.97006 * 119.99630 * 359.97438 * 16 14 12 45 45 H 0.96997 * 119.99733 * 0.02562 * 17 16 14 46 46 H 1.08000 * 119.92662 * 180.23702 * 23 21 20 47 47 H 1.08998 * 109.46814 * 135.02763 * 25 24 23 48 48 H 0.96697 * 113.99721 * 60.00834 * 26 25 24 49 49 H 1.48494 * 109.99994 * 180.02562 * 27 25 24 50 50 H 1.48501 * 109.99719 * 301.31818 * 27 25 24 51 51 H 1.08005 * 120.07109 * 180.02562 * 30 28 24 52 52 H 1.08994 * 113.61782 * 334.57296 * 31 9 8 53 53 H 1.09007 * 113.60724 * 105.39059 * 31 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0399 -0.7212 -1.2493 5 8 2.0140 -0.6845 1.1855 6 6 1.6522 -1.9724 1.3382 7 8 0.9471 -2.5081 0.5062 8 7 2.0681 -2.6659 2.4164 9 6 1.6740 -4.0670 2.5829 10 1 0.7592 -4.3161 2.0452 11 6 2.8218 -5.0622 2.3439 12 6 2.2738 -5.8602 3.5388 13 1 1.5235 -6.6008 3.2621 14 6 3.3484 -6.4203 4.4346 15 8 3.6626 -5.8305 5.4467 16 7 3.9605 -7.5766 4.1110 17 7 4.9600 -8.0970 4.9435 18 6 5.5716 -9.2537 4.6201 19 8 5.2565 -9.8451 3.6058 20 6 6.6257 -9.8020 5.4974 21 6 7.2582 -11.0045 5.1681 22 9 6.9075 -11.6688 4.0453 23 6 8.2474 -11.5098 5.9923 24 6 8.6038 -10.8337 7.1436 25 6 9.6789 -11.3932 8.0394 26 8 9.0792 -11.9612 9.2055 27 14 10.6267 -12.7102 7.1242 28 6 7.9767 -9.6434 7.4788 29 9 8.3311 -8.9894 8.6066 30 6 6.9909 -9.1248 6.6629 31 6 1.6758 -4.5376 4.0469 32 1 -0.3633 0.5138 0.8901 33 1 -0.3634 0.5139 -0.8899 34 1 -0.3634 -1.0277 0.0005 35 1 3.1300 1.4425 -0.0005 36 1 1.6766 1.9563 -0.8900 37 1 1.6767 1.9563 0.8900 38 1 1.6766 -1.7488 -1.2494 39 1 1.6765 -0.2074 -2.1393 40 1 3.1299 -0.7216 -1.2492 41 1 2.6278 -2.2369 3.0826 42 1 2.7492 -5.5927 1.3945 43 1 3.8107 -4.6384 2.5185 44 1 3.7090 -8.0485 3.3016 45 1 5.2111 -7.6253 5.7530 46 1 8.7398 -12.4366 5.7374 47 1 10.3592 -10.5939 8.3334 48 1 8.4604 -12.6804 9.0189 49 1 11.6895 -13.2704 7.9970 50 1 9.7047 -13.7905 6.6902 51 1 6.5037 -8.1973 6.9252 52 1 2.3514 -3.9704 4.6871 53 1 0.6779 -4.6431 4.4728 There are 79 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 79 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14472184_12360598.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 04:17:58 Heat of formation + Delta-G solvation = -174.691936 kcal Electronic energy + Delta-G solvation = -40828.086584 eV Core-core repulsion = 34919.447455 eV Total energy + Delta-G solvation = -5908.639129 eV No. of doubly occupied orbitals = 79 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 428.168 amu Computer time = 1.90 seconds Orbital eigenvalues (eV) -50.16343 -50.13914 -42.13438 -41.76816 -41.10658 -40.08406 -39.25446 -37.84384 -37.76930 -36.62523 -35.37393 -34.23100 -33.93431 -32.09812 -31.45285 -28.36569 -28.30870 -28.13512 -27.09559 -26.78488 -24.50325 -24.31995 -23.65140 -22.67008 -22.09887 -21.39282 -20.67333 -19.82335 -19.36640 -19.13604 -18.97401 -18.43217 -18.22304 -17.89148 -17.50484 -17.40138 -17.19044 -16.93751 -16.83553 -16.60097 -16.39125 -16.27744 -16.23909 -15.93497 -15.79356 -15.68699 -15.47497 -15.36775 -15.27934 -14.94172 -14.79053 -14.38585 -14.16240 -13.88260 -13.82669 -13.54269 -13.37371 -13.25252 -13.11630 -13.07971 -12.92410 -12.87038 -12.66304 -12.57613 -12.47546 -12.46031 -12.34192 -12.19974 -11.92585 -11.80168 -11.64898 -11.39536 -11.16802 -11.10303 -10.80627 -10.66976 -10.19051 -9.93843 -9.63389 -4.95207 -0.92755 -0.36937 0.49172 1.06109 1.15330 1.18256 1.42236 1.54412 1.72898 1.92589 2.11260 2.50894 2.70852 2.83970 3.02853 3.14523 3.19321 3.22732 3.33770 3.37863 3.44046 3.66228 3.69108 3.74031 3.76334 3.79868 3.94302 4.00036 4.08968 4.25389 4.34294 4.42425 4.45957 4.56581 4.60870 4.61368 4.63817 4.67008 4.68205 4.73964 4.76443 4.84547 4.86594 4.87373 4.96994 5.00780 5.15117 5.27195 5.29044 5.29620 5.32021 5.43508 5.47865 5.58253 6.21446 6.37660 6.39035 6.55725 7.05894 7.32316 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.180 4.180 2 C 0.127 3.873 3 C -0.139 4.139 4 C -0.180 4.180 5 O -0.371 6.371 6 C 0.644 3.356 7 O -0.591 6.591 8 N -0.692 5.692 9 C 0.139 3.861 10 H 0.122 0.878 11 C -0.133 4.133 12 C -0.115 4.115 13 H 0.156 0.844 14 C 0.531 3.469 15 O -0.564 6.564 16 N -0.515 5.515 17 N -0.513 5.513 18 C 0.564 3.436 19 O -0.547 6.547 20 C -0.140 4.140 21 C 0.152 3.848 22 F -0.119 7.119 23 C -0.127 4.127 24 C -0.084 4.084 25 C -0.090 4.090 26 O -0.540 6.540 27 Si 0.775 3.225 28 C 0.106 3.894 29 F -0.128 7.128 30 C -0.080 4.080 31 C -0.115 4.115 32 H 0.061 0.939 33 H 0.086 0.914 34 H 0.066 0.934 35 H 0.068 0.932 36 H 0.098 0.902 37 H 0.069 0.931 38 H 0.065 0.935 39 H 0.086 0.914 40 H 0.061 0.939 41 H 0.416 0.584 42 H 0.097 0.903 43 H 0.089 0.911 44 H 0.441 0.559 45 H 0.438 0.562 46 H 0.177 0.823 47 H 0.132 0.868 48 H 0.391 0.609 49 H -0.295 1.295 50 H -0.266 1.266 51 H 0.172 0.828 52 H 0.097 0.903 53 H 0.099 0.901 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.631 1.463 -0.756 2.318 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.091 3.909 3 C -0.196 4.196 4 C -0.237 4.237 5 O -0.286 6.286 6 C 0.398 3.602 7 O -0.481 6.481 8 N -0.350 5.350 9 C 0.035 3.965 10 H 0.140 0.860 11 C -0.172 4.172 12 C -0.138 4.138 13 H 0.173 0.827 14 C 0.319 3.681 15 O -0.441 6.441 16 N -0.264 5.264 17 N -0.261 5.261 18 C 0.352 3.648 19 O -0.424 6.424 20 C -0.146 4.146 21 C 0.131 3.869 22 F -0.097 7.097 23 C -0.145 4.145 24 C -0.086 4.086 25 C -0.198 4.198 26 O -0.348 6.348 27 Si 0.678 3.322 28 C 0.086 3.914 29 F -0.106 7.106 30 C -0.099 4.099 31 C -0.154 4.154 32 H 0.080 0.920 33 H 0.105 0.895 34 H 0.085 0.915 35 H 0.087 0.913 36 H 0.117 0.883 37 H 0.088 0.912 38 H 0.084 0.916 39 H 0.105 0.895 40 H 0.080 0.920 41 H 0.253 0.747 42 H 0.116 0.884 43 H 0.107 0.893 44 H 0.285 0.715 45 H 0.283 0.717 46 H 0.194 0.806 47 H 0.150 0.850 48 H 0.240 0.760 49 H -0.223 1.223 50 H -0.192 1.192 51 H 0.190 0.810 52 H 0.116 0.884 53 H 0.117 0.883 Dipole moment (debyes) X Y Z Total from point charges 1.848 0.925 -0.950 2.275 hybrid contribution -0.708 -0.264 1.023 1.272 sum 1.140 0.661 0.074 1.320 Atomic orbital electron populations 1.22479 0.93965 1.03832 1.03471 1.22340 0.94499 0.92507 0.81534 1.21897 1.02420 0.91054 1.04215 1.22471 1.01585 1.02340 0.97299 1.86320 1.71581 1.23444 1.47267 1.18395 0.78557 0.80670 0.82571 1.90899 1.41929 1.71037 1.44276 1.44768 1.54831 1.12372 1.23071 1.22559 0.99018 0.77174 0.97735 0.85999 1.23498 0.99371 0.96411 0.97965 1.22575 0.96603 0.98511 0.96074 0.82674 1.21182 0.82284 0.78134 0.86469 1.90744 1.65701 1.59813 1.27848 1.45154 1.32915 1.24074 1.24300 1.44675 1.33641 1.23248 1.24580 1.18020 0.81601 0.79693 0.85511 1.90900 1.65071 1.59660 1.26775 1.19381 1.00512 0.96954 0.97703 1.17639 0.95054 0.90028 0.84145 1.91623 1.90560 1.79060 1.48462 1.21134 0.97340 1.02506 0.93499 1.20492 0.98398 0.93834 0.95889 1.25368 0.96841 1.07042 0.90549 1.86666 1.63157 1.54711 1.30313 0.93838 0.78182 0.76769 0.83385 1.17325 0.97089 0.92239 0.84758 1.91581 1.90720 1.80018 1.48269 1.21309 0.95975 1.00905 0.91739 1.23290 1.03350 0.93408 0.95316 0.92011 0.89522 0.91536 0.91263 0.88335 0.91242 0.91575 0.89517 0.92033 0.74749 0.88448 0.89265 0.71526 0.71732 0.80638 0.85005 0.75957 1.22292 1.19243 0.81039 0.88439 0.88250 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -0.47 8.37 71.98 0.60 0.14 16 2 C 0.13 0.31 1.13 -10.79 -0.01 0.30 16 3 C -0.14 0.30 8.85 71.98 0.64 0.94 16 4 C -0.18 -0.46 8.37 71.98 0.60 0.14 16 5 O -0.37 -1.83 9.94 -55.54 -0.55 -2.38 16 6 C 0.64 3.43 8.06 129.79 1.05 4.48 16 7 O -0.59 -5.85 11.48 19.83 0.23 -5.62 16 8 N -0.69 0.65 5.36 -567.61 -3.04 -2.39 16 9 C 0.14 -0.58 4.24 45.52 0.19 -0.38 16 10 H 0.12 -0.32 7.46 -2.39 -0.02 -0.34 16 11 C -0.13 0.83 7.43 31.12 0.23 1.06 16 12 C -0.11 0.85 4.15 -11.01 -0.05 0.80 16 13 H 0.16 -1.94 8.14 -2.39 -0.02 -1.96 16 14 C 0.53 -0.98 7.47 87.66 0.65 -0.32 16 15 O -0.56 -2.57 15.74 -3.04 -0.05 -2.62 16 16 N -0.52 1.14 6.26 -173.53 -1.09 0.05 16 17 N -0.51 0.52 6.21 -175.71 -1.09 -0.57 16 18 C 0.56 1.29 7.89 86.74 0.68 1.98 16 19 O -0.55 -4.83 15.17 -3.92 -0.06 -4.89 16 20 C -0.14 0.12 5.88 -20.06 -0.12 0.00 16 21 C 0.15 0.00 7.28 22.67 0.17 0.17 16 22 F -0.12 -0.62 15.55 44.97 0.70 0.08 16 23 C -0.13 0.58 8.62 22.28 0.19 0.77 16 24 C -0.08 0.35 5.27 -19.77 -0.10 0.25 16 25 C -0.09 0.39 2.44 71.24 0.17 0.57 16 26 O -0.54 0.46 12.88 -148.98 -1.92 -1.45 16 27 Si 0.78 -4.85 30.24 68.60 2.07 -2.78 16 28 C 0.11 -0.26 7.23 22.33 0.16 -0.10 16 29 F -0.13 -0.12 16.73 44.97 0.75 0.63 16 30 C -0.08 0.35 9.51 22.57 0.21 0.56 16 31 C -0.12 0.70 7.16 31.12 0.22 0.92 16 32 H 0.06 0.13 8.14 -2.38 -0.02 0.11 16 33 H 0.09 -0.06 8.14 -2.39 -0.02 -0.08 16 34 H 0.07 0.49 5.87 -2.38 -0.01 0.48 16 35 H 0.07 -0.16 8.14 -2.39 -0.02 -0.18 16 36 H 0.10 -0.54 8.14 -2.39 -0.02 -0.55 16 37 H 0.07 -0.16 8.14 -2.39 -0.02 -0.18 16 38 H 0.07 0.49 5.89 -2.39 -0.01 0.47 16 39 H 0.09 -0.07 8.14 -2.39 -0.02 -0.08 16 40 H 0.06 0.13 8.14 -2.39 -0.02 0.11 16 41 H 0.42 -1.70 8.84 -92.71 -0.82 -2.52 16 42 H 0.10 -0.70 8.14 -2.39 -0.02 -0.72 16 43 H 0.09 -0.42 8.09 -2.38 -0.02 -0.44 16 44 H 0.44 -1.86 8.00 -213.31 -1.71 -3.57 16 45 H 0.44 -1.59 6.03 -213.32 -1.29 -2.87 16 46 H 0.18 -1.40 4.83 -2.91 -0.01 -1.42 16 47 H 0.13 -0.68 7.89 -2.39 -0.02 -0.70 16 48 H 0.39 -2.90 8.70 -74.06 -0.64 -3.54 16 49 H -0.30 -0.54 7.11 99.48 0.71 0.16 16 50 H -0.27 1.08 6.68 99.48 0.66 1.75 16 51 H 0.17 -1.52 6.41 -2.91 -0.02 -1.54 16 52 H 0.10 -0.37 7.41 -2.39 -0.02 -0.38 16 53 H 0.10 -0.76 8.14 -2.38 -0.02 -0.77 16 Total: 0.00 -26.48 445.53 -1.96 -28.44 By element: Atomic # 1 Polarization: -15.36 SS G_CDS: -3.41 Total: -18.78 kcal Atomic # 6 Polarization: 6.77 SS G_CDS: 5.50 Total: 12.28 kcal Atomic # 7 Polarization: 2.31 SS G_CDS: -5.22 Total: -2.91 kcal Atomic # 8 Polarization: -14.61 SS G_CDS: -2.35 Total: -16.96 kcal Atomic # 9 Polarization: -0.74 SS G_CDS: 1.45 Total: 0.71 kcal Atomic # 14 Polarization: -4.85 SS G_CDS: 2.07 Total: -2.78 kcal Total: -26.48 -1.96 -28.44 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14472184_12360598.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -146.256 kcal (2) G-P(sol) polarization free energy of solvation -26.479 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -172.735 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.957 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.436 kcal (6) G-S(sol) free energy of system = (1) + (5) -174.692 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.91 seconds