Wall clock time and date at job start Sun Mar 7 2021 04:22:40
AMSOL-version 7.1
by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers,
I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget,
B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar
Copyright 2004 by Regents of the University of Minnesota.
All rights reserved.
Notice: recipients of this code are asked to comply
with the user agreement in Section 1 of the documentation file.
*******************************************************************************
* 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION
* - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT)
* GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK
* TLIMIT= - A TIME OF 15. SECONDS REQUESTED
* CHARGE - CHARGE ON SYSTEM= 0
* AM1 - THE AM1 HAMILTONIAN TO BE USED
* DEV - DEVELOPER OPTIONS ARE ALLOWED
* SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED
* - CHARGE MODEL 2 WILL BE USED (CM2A)
* - THE SOLVENT IS USER-SPECIFIED
* DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06
* IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345
* ALPHA - THE SOLVENT ALPHA IS 0.00
* BETA - THE SOLVENT BETA IS 0.00
* GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS
* 38.93 CAL MOL^-1 ANGSTROM^-2
* FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00
* FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00
*******************************************************************************
Atom NO. Chemical Bond length Bond angle Dihedral angle
number (k) symbol (angstroms) (degrees) (degrees)
(I) NA:I NB:NA:I NC:NB:NA:I NA NB NC
1 1 C
2 2 C 1.53003 * 1
3 3 C 1.52994 * 109.47486 * 2 1
4 4 C 1.53000 * 109.46793 * 239.99949 * 2 1 3
5 5 O 1.45200 * 109.46618 * 120.00414 * 2 1 3
6 6 C 1.34635 * 117.00409 * 59.99513 * 5 2 1
7 7 O 1.21509 * 120.00107 * 0.02562 * 6 5 2
8 8 N 1.34777 * 119.99875 * 179.97438 * 6 5 2
9 9 C 1.46499 * 119.99965 * 180.02562 * 8 6 5
10 10 H 1.09005 * 112.84778 * 336.19523 * 9 8 6
11 11 C 1.53784 * 113.69299 * 107.46156 * 9 8 6
12 12 C 1.53781 * 87.07940 * 139.99459 * 11 9 8
13 13 H 1.09000 * 113.69569 * 89.12968 * 12 11 9
14 14 C 1.50706 * 113.61233 * 220.02279 * 12 11 9
15 15 O 1.21279 * 120.00072 * 97.49490 * 14 12 11
16 16 N 1.34777 * 119.99762 * 277.49285 * 14 12 11
17 17 N 1.40095 * 119.99994 * 180.02562 * 16 14 12
18 18 C 1.34777 * 119.99998 * 180.02562 * 17 16 14
19 19 O 1.21690 * 120.00218 * 359.97438 * 18 17 16
20 20 C 1.46676 * 119.99971 * 180.02562 * 18 17 16
21 21 C 1.37874 * 126.23379 * 180.02562 * 20 18 17
22 22 C 1.39834 * 107.08707 * 179.97438 * 21 20 18
23 23 C 1.35453 * 107.86645 * 359.97438 * 22 21 20
24 24 C 1.50695 * 125.56569 * 180.02562 * 23 22 21
25 25 O 1.42902 * 109.47342 * 119.97304 * 24 23 22
26 26 Si 1.86294 * 109.47157 * 359.96736 * 24 23 22
27 27 N 1.35540 * 108.86731 * 359.72568 * 23 22 21
28 28 C 1.53776 * 113.61504 * 204.99830 * 9 8 6
29 29 H 1.09002 * 109.47362 * 300.00398 * 1 2 3
30 30 H 1.09004 * 109.46784 * 59.99901 * 1 2 3
31 31 H 1.08993 * 109.47546 * 180.02562 * 1 2 3
32 32 H 1.08997 * 109.47520 * 180.02562 * 3 2 1
33 33 H 1.09004 * 109.47190 * 299.99850 * 3 2 1
34 34 H 1.09003 * 109.47062 * 60.00018 * 3 2 1
35 35 H 1.09007 * 109.47118 * 300.00396 * 4 2 1
36 36 H 1.08991 * 109.47321 * 60.00204 * 4 2 1
37 37 H 1.08998 * 109.47158 * 180.02562 * 4 2 1
38 38 H 0.97001 * 120.00079 * 359.97438 * 8 6 5
39 39 H 1.08996 * 113.60998 * 25.44578 * 11 9 8
40 40 H 1.08997 * 113.61611 * 254.53905 * 11 9 8
41 41 H 0.96999 * 120.00047 * 0.02562 * 16 14 12
42 42 H 0.96999 * 119.99959 * 359.97438 * 17 16 14
43 43 H 1.08000 * 126.45465 * 0.02562 * 21 20 18
44 44 H 1.07999 * 126.06961 * 180.02562 * 22 21 20
45 45 H 1.09000 * 109.46752 * 239.96757 * 24 23 22
46 46 H 0.96706 * 113.99627 * 299.99848 * 25 24 23
47 47 H 1.48505 * 110.00217 * 180.02562 * 26 24 23
48 48 H 1.48499 * 110.00461 * 301.32262 * 26 24 23
49 49 H 0.97001 * 125.67521 * 180.30050 * 27 23 22
50 50 H 1.09011 * 113.61528 * 105.38125 * 28 9 8
51 51 H 1.08999 * 113.61794 * 334.48181 * 28 9 8
Note: An asterisk (*) indicates this parameter was or will be optimized.
Cartesian coordinates (angstroms)
NO. Atom X Y Z
1 6 0.0000 0.0000 0.0000
2 6 1.5300 0.0000 0.0000
3 6 2.0401 1.4424 0.0000
4 6 2.0399 -0.7213 -1.2493
5 8 2.0139 -0.6846 1.1855
6 6 1.6520 -1.9724 1.3383
7 8 0.9514 -2.5097 0.5036
8 7 2.0678 -2.6658 2.4167
9 6 1.6745 -4.0672 2.5827
10 1 0.7601 -4.3168 2.0444
11 6 2.8214 -5.0634 2.3435
12 6 2.2727 -5.8611 3.5382
13 1 1.5218 -6.6016 3.2627
14 6 3.3469 -6.4222 4.4339
15 8 3.6615 -5.8328 5.4461
16 7 3.9580 -7.5790 4.1101
17 7 4.9562 -8.1010 4.9430
18 6 5.5677 -9.2575 4.6189
19 8 5.2523 -9.8487 3.6031
20 6 6.6124 -9.8043 5.4912
21 6 7.3184 -10.9704 5.2850
22 6 8.2080 -11.1069 6.3553
23 6 8.0342 -10.0451 7.1781
24 6 8.7921 -9.7931 8.4560
25 8 9.4915 -8.5508 8.3580
26 14 10.0124 -11.1725 8.7364
27 7 7.0719 -9.2427 6.6610
28 6 1.6758 -4.5381 4.0465
29 1 -0.3634 0.5139 0.8899
30 1 -0.3633 0.5139 -0.8900
31 1 -0.3634 -1.0276 0.0005
32 1 3.1301 1.4424 -0.0005
33 1 1.6768 1.9563 -0.8900
34 1 1.6768 1.9563 0.8900
35 1 1.6765 -1.7490 -1.2493
36 1 1.6767 -0.2075 -2.1392
37 1 3.1299 -0.7217 -1.2491
38 1 2.6280 -2.2371 3.0825
39 1 3.8106 -4.6403 2.5182
40 1 2.7484 -5.5936 1.3939
41 1 3.7066 -8.0502 3.3004
42 1 5.2079 -7.6296 5.7526
43 1 7.2062 -11.6499 4.4531
44 1 8.9097 -11.9150 6.4998
45 1 8.0927 -9.7514 9.2910
46 1 10.1323 -8.5163 7.6346
47 1 10.7660 -10.9362 9.9941
48 1 9.3006 -12.4738 8.8083
49 1 6.7575 -8.4124 7.0516
50 1 0.6778 -4.6443 4.4720
51 1 2.3518 -3.9716 4.6869
There are 71 doubly filled levels
RHF calculation, no. of doubly occupied orbitals= 71
No. of singly occupied orbitals= 1
REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN:
H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987).
REFERENCE FOR CHARGE MODEL 2:
J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885.
REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL:
J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and
D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63
P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted.
CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R
& SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93
& DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV
s_22_14472184_6580494.mol2 51
1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED
SCF FIELD WAS ACHIEVED
Wall clock time and date at job start Sun Mar 7 2021 04:22:40
Heat of formation + Delta-G solvation = -74.521712 kcal
Electronic energy + Delta-G solvation = -34249.520277 eV
Core-core repulsion = 29346.933036 eV
Total energy + Delta-G solvation = -4902.587241 eV
No. of doubly occupied orbitals = 71
and no. of open levels = 1
Molecular weight
(most abundant/longest-lived isotopes) = 381.182 amu
Computer time = 1.28 seconds
Orbital eigenvalues (eV)
-42.69032 -42.04722 -41.49433 -40.41413 -39.22274 -37.85985 -37.70313 -36.52440
-35.29205 -34.16746 -33.16986 -32.08247 -31.21276 -28.32672 -28.28747 -27.76201
-26.99797 -26.65895 -24.10641 -23.43141 -22.52384 -21.79565 -21.51759 -21.20086
-20.69926 -19.96084 -19.10742 -18.96793 -18.70864 -17.97103 -17.37835 -17.09236
-16.98522 -16.77862 -16.62383 -16.31528 -16.11996 -15.74394 -15.45226 -15.40530
-15.27078 -15.23718 -14.93133 -14.62579 -14.50046 -14.35018 -14.09459 -13.91979
-13.80212 -13.73350 -13.42819 -13.11565 -12.87183 -12.82695 -12.72237 -12.55485
-12.49033 -12.36695 -12.32115 -12.21085 -12.12278 -11.92967 -11.64127 -11.30151
-11.18990 -10.97125 -10.83563 -10.22056 -10.20000 -9.74692 -9.32672 -5.10515
0.15501 0.51613 1.04843 1.16119 1.23225 1.44805 1.58507 1.77632
1.85104 2.03206 2.17490 2.70756 3.06263 3.09718 3.18622 3.21837
3.40498 3.45022 3.49403 3.64984 3.77739 3.83413 3.84092 3.97337
4.12835 4.15470 4.24036 4.28284 4.40932 4.48502 4.56298 4.60925
4.63279 4.67754 4.73543 4.78415 4.85119 4.87087 4.93195 4.94244
4.95873 5.09067 5.27315 5.31319 5.35935 5.36445 5.45922 5.57275
5.59468 5.72206 6.10008 6.26447 6.31429 6.39145 6.60682 7.08132
7.40476
Net atomic charges, atomic populations, and dipole contributions
calculated with CM2
Atom NO. Type Charge No. of electrons
1 C -0.184 4.184
2 C 0.137 3.863
3 C -0.142 4.142
4 C -0.184 4.184
5 O -0.365 6.365
6 C 0.651 3.349
7 O -0.566 6.566
8 N -0.701 5.701
9 C 0.143 3.857
10 H 0.127 0.873
11 C -0.139 4.139
12 C -0.125 4.125
13 H 0.129 0.871
14 C 0.528 3.472
15 O -0.536 6.536
16 N -0.517 5.517
17 N -0.528 5.528
18 C 0.594 3.406
19 O -0.522 6.522
20 C -0.050 4.050
21 C -0.085 4.085
22 C -0.200 4.200
23 C 0.031 3.969
24 C -0.058 4.058
25 O -0.543 6.543
26 Si 0.723 3.277
27 N -0.524 5.524
28 C -0.120 4.120
29 H 0.060 0.940
30 H 0.072 0.928
31 H 0.087 0.913
32 H 0.067 0.933
33 H 0.082 0.918
34 H 0.067 0.933
35 H 0.087 0.913
36 H 0.072 0.928
37 H 0.060 0.940
38 H 0.408 0.592
39 H 0.094 0.906
40 H 0.090 0.910
41 H 0.436 0.564
42 H 0.426 0.574
43 H 0.156 0.844
44 H 0.154 0.846
45 H 0.117 0.883
46 H 0.384 0.616
47 H -0.253 1.253
48 H -0.252 1.252
49 H 0.418 0.582
50 H 0.090 0.910
51 H 0.105 0.895
For the charges calculated by CM2:
Dipole moment (debyes) X Y Z Total
from point charges 2.547 0.509 0.082 2.598
Note: The Mulliken population analysis charges presented below were not
used in the solvation calculation but are provided for completeness.
The chosen solvation model uses CM2 partial charges for calculating
solvation energies.
Net atomic charges, atomic populations, and dipole contributions
using Mulliken population analysis
Atom NO. Type Charge No. of electrons
1 C -0.241 4.241
2 C 0.100 3.900
3 C -0.199 4.199
4 C -0.241 4.241
5 O -0.279 6.279
6 C 0.405 3.595
7 O -0.455 6.455
8 N -0.360 5.360
9 C 0.039 3.961
10 H 0.145 0.855
11 C -0.178 4.178
12 C -0.149 4.149
13 H 0.147 0.853
14 C 0.315 3.685
15 O -0.411 6.411
16 N -0.266 5.266
17 N -0.276 5.276
18 C 0.382 3.618
19 O -0.397 6.397
20 C -0.165 4.165
21 C -0.112 4.112
22 C -0.225 4.225
23 C -0.088 4.088
24 C -0.168 4.168
25 O -0.348 6.348
26 Si 0.623 3.377
27 N -0.121 5.121
28 C -0.159 4.159
29 H 0.079 0.921
30 H 0.091 0.909
31 H 0.106 0.894
32 H 0.086 0.914
33 H 0.101 0.899
34 H 0.086 0.914
35 H 0.106 0.894
36 H 0.091 0.909
37 H 0.079 0.921
38 H 0.244 0.756
39 H 0.112 0.888
40 H 0.109 0.891
41 H 0.279 0.721
42 H 0.267 0.733
43 H 0.174 0.826
44 H 0.172 0.828
45 H 0.134 0.866
46 H 0.232 0.768
47 H -0.178 1.178
48 H -0.176 1.176
49 H 0.256 0.744
50 H 0.108 0.892
51 H 0.124 0.876
Dipole moment (debyes) X Y Z Total
from point charges 1.964 -0.012 0.666 2.073
hybrid contribution -0.574 0.860 0.533 1.164
sum 1.389 0.848 1.199 2.021
Atomic orbital electron populations
1.22524 0.93815 1.05048 1.02739 1.22124 0.94461 0.91565 0.81842
1.21881 1.02341 0.92363 1.03352 1.22521 1.01605 1.03448 0.96542
1.86313 1.71434 1.23432 1.46752 1.18155 0.78561 0.80593 0.82196
1.90915 1.40989 1.70529 1.43028 1.44702 1.55380 1.11985 1.23883
1.22465 0.98821 0.77768 0.97081 0.85494 1.23547 1.00027 0.96743
0.97501 1.22506 0.97030 0.98246 0.97079 0.85324 1.20755 0.82389
0.78666 0.86713 1.90746 1.64780 1.59115 1.26467 1.44989 1.33397
1.23992 1.24178 1.44723 1.34505 1.23996 1.24375 1.17084 0.80444
0.78933 0.85292 1.90901 1.64225 1.59214 1.25317 1.19974 1.04681
0.99864 0.91956 1.21336 0.95197 0.95150 0.99523 1.20743 1.04947
1.00318 0.96451 1.21237 0.95012 0.93916 0.98632 1.25029 1.00033
0.97383 0.94356 1.86517 1.57440 1.34267 1.56586 0.94018 0.82796
0.75140 0.85777 1.41994 1.30140 1.20992 1.18967 1.23332 1.02987
0.93474 0.96114 0.92108 0.90916 0.89420 0.91398 0.89918 0.91380
0.89411 0.90918 0.92132 0.75619 0.88756 0.89122 0.72149 0.73251
0.82598 0.82817 0.86579 0.76821 1.17762 1.17612 0.74365 0.89186
0.87637
Number of geometries 1
Number of calculations of the screened coulomb radii 1
The total number of SCF iterations 13.
Note: The number of geometries may not
correspond to the number of cycles due to rejected geometry changes.
In the following table subtotal= G_P + SS G_CDS.
Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M
number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value
1 C -0.18 -0.21 8.37 37.16 0.31 0.10 16
2 C 0.14 0.16 1.13 -90.62 -0.10 0.06 16
3 C -0.14 0.10 8.85 37.15 0.33 0.43 16
4 C -0.18 -0.22 8.37 37.16 0.31 0.10 16
5 O -0.36 -0.83 9.94 -40.31 -0.40 -1.23 16
6 C 0.65 1.55 8.06 54.06 0.44 1.98 16
7 O -0.57 -2.51 11.48 -19.28 -0.22 -2.73 16
8 N -0.70 0.36 5.36 -57.93 -0.31 0.05 16
9 C 0.14 -0.27 4.24 -67.12 -0.28 -0.55 16
10 H 0.13 -0.16 7.46 -51.93 -0.39 -0.54 16
11 C -0.14 0.37 7.43 -25.92 -0.19 0.18 16
12 C -0.13 0.37 4.15 -90.96 -0.38 0.00 16
13 H 0.13 -0.65 8.14 -51.93 -0.42 -1.08 16
14 C 0.53 -0.14 7.47 -10.98 -0.08 -0.22 16
15 O -0.54 -1.52 15.74 5.56 0.09 -1.43 16
16 N -0.52 0.24 6.26 31.22 0.20 0.44 16
17 N -0.53 -0.09 6.26 30.26 0.19 0.10 16
18 C 0.59 1.01 7.90 -12.85 -0.10 0.91 16
19 O -0.52 -2.35 16.72 5.20 0.09 -2.27 16
20 C -0.05 -0.03 7.06 -81.98 -0.58 -0.61 16
21 C -0.09 -0.04 10.65 -39.12 -0.42 -0.45 16
22 C -0.20 0.22 9.32 -39.98 -0.37 -0.16 16
23 C 0.03 -0.04 6.47 -81.95 -0.53 -0.57 16
24 C -0.06 0.12 3.08 36.00 0.11 0.23 16
25 O -0.54 0.94 12.88 -35.23 -0.45 0.48 16
26 Si 0.72 -2.04 30.54 -169.99 -5.19 -7.23 16
27 N -0.52 0.67 5.99 -5.70 -0.03 0.63 16
28 C -0.12 0.31 7.16 -25.92 -0.19 0.12 16
29 H 0.06 0.06 8.14 -51.93 -0.42 -0.37 16
30 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16
31 H 0.09 0.27 5.88 -51.93 -0.31 -0.03 16
32 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16
33 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16
34 H 0.07 -0.05 8.14 -51.93 -0.42 -0.48 16
35 H 0.09 0.28 5.88 -51.92 -0.31 -0.03 16
36 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16
37 H 0.06 0.06 8.14 -51.93 -0.42 -0.36 16
38 H 0.41 -0.83 8.84 -40.82 -0.36 -1.19 16
39 H 0.09 -0.19 8.09 -51.93 -0.42 -0.61 16
40 H 0.09 -0.28 8.14 -51.93 -0.42 -0.70 16
41 H 0.44 -0.66 8.00 -182.60 -1.46 -2.12 16
42 H 0.43 -0.38 7.13 -182.60 -1.30 -1.68 16
43 H 0.16 -0.02 8.06 -52.49 -0.42 -0.44 16
44 H 0.15 -0.48 6.17 -52.49 -0.32 -0.81 16
45 H 0.12 -0.22 7.96 -51.93 -0.41 -0.64 16
46 H 0.38 -2.03 8.70 45.56 0.40 -1.63 16
47 H -0.25 -0.11 7.11 56.52 0.40 0.29 16
48 H -0.25 0.09 7.11 56.52 0.40 0.49 16
49 H 0.42 -1.23 8.19 -40.82 -0.33 -1.57 16
50 H 0.09 -0.28 8.14 -51.92 -0.42 -0.71 16
51 H 0.11 -0.16 7.41 -51.93 -0.38 -0.55 16
LS Contribution 424.29 15.07 6.39 6.39
Total: 0.00 -11.08 424.29 -10.84 -21.92
By element:
Atomic # 1 Polarization: -7.22 SS G_CDS: -9.45 Total: -16.67 kcal
Atomic # 6 Polarization: 3.27 SS G_CDS: -1.73 Total: 1.55 kcal
Atomic # 7 Polarization: 1.17 SS G_CDS: 0.04 Total: 1.21 kcal
Atomic # 8 Polarization: -6.28 SS G_CDS: -0.90 Total: -7.18 kcal
Atomic # 14 Polarization: -2.04 SS G_CDS: -5.19 Total: -7.23 kcal
Total LS contribution 6.39 Total: 6.39 kcal
Total: -11.08 -10.84 -21.92 kcal
The number of atoms in the molecule is 51
The average number of expansion shells was 16.00
The maximum number of expansion shells was 16
The minimum number of expansion shells was 16
**** NOTA BENE ****
This is the net solvation energy for this exact molecular structure
(nuclear and electronic)! The standard-state solvation energy should be
obtained as the difference between the heat of formation plus delta-G solvation
for the relaxed solvated system and that for the relaxed gas-phase system.
s_22_14472184_6580494.mol2 51
1SCF run
This is a breakdown of the solvation energy calculated
without geometric relaxation in solution:
(1) E-EN(sol) electronic-nuclear energy of solute -52.604 kcal
(2) G-P(sol) polarization free energy of solvation -11.082 kcal
(3) G-ENP(sol) elect.-nuc.-pol. free energy of system -63.686 kcal
(4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.835 kcal
(5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.918 kcal
(6) G-S(sol) free energy of system = (1) + (5) -74.522 kcal
1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED
Total computer time = 1.28 seconds