Wall clock time and date at job start Sun Mar 7 2021 00:49:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45206 * 1 3 3 C 1.34223 * 117.00090 * 2 1 4 4 O 1.20830 * 120.00076 * 0.02562 * 3 2 1 5 5 C 1.50702 * 120.00188 * 179.72499 * 3 2 1 6 6 H 1.09005 * 109.46872 * 300.27915 * 5 3 2 7 7 C 1.53003 * 109.46617 * 60.27672 * 5 3 2 8 8 C 1.53004 * 109.46871 * 180.02562 * 7 5 3 9 9 C 1.53004 * 109.47147 * 299.99939 * 8 7 5 10 10 H 1.08996 * 109.47207 * 179.97438 * 9 8 7 11 11 N 1.46495 * 109.46836 * 300.00253 * 9 8 7 12 12 C 1.34780 * 119.99895 * 274.99549 * 11 9 8 13 13 O 1.21689 * 120.00088 * 354.41458 * 12 11 9 14 14 C 1.46676 * 120.00001 * 174.41352 * 12 11 9 15 15 C 1.37872 * 126.23485 * 4.71493 * 14 12 11 16 16 C 1.39829 * 107.08708 * 180.02562 * 15 14 12 17 17 C 1.50707 * 126.06599 * 180.02562 * 16 15 14 18 18 O 1.42900 * 109.47073 * 299.99524 * 17 16 15 19 19 Si 1.86306 * 109.46770 * 179.97438 * 17 16 15 20 20 C 1.35455 * 107.86666 * 0.02562 * 16 15 14 21 21 N 1.35529 * 108.86762 * 359.73013 * 20 16 15 22 22 C 1.46501 * 125.68030 * 180.30438 * 21 20 16 23 23 C 1.53004 * 109.46862 * 60.00057 * 9 8 7 24 24 C 1.52996 * 109.47335 * 180.27742 * 5 3 2 25 25 H 1.08996 * 109.47348 * 180.02562 * 1 2 3 26 26 H 1.09003 * 109.46754 * 300.00293 * 1 2 3 27 27 H 1.08997 * 109.46943 * 59.99403 * 1 2 3 28 28 H 1.08999 * 109.47398 * 299.99931 * 7 5 3 29 29 H 1.08991 * 109.47397 * 60.00523 * 7 5 3 30 30 H 1.09001 * 109.47235 * 180.02562 * 8 7 5 31 31 H 1.09005 * 109.47036 * 59.99987 * 8 7 5 32 32 H 0.97003 * 120.00485 * 95.00481 * 11 9 8 33 33 H 1.08000 * 126.45377 * 0.03409 * 15 14 12 34 34 H 1.09000 * 109.47257 * 60.00118 * 17 16 15 35 35 H 0.96702 * 113.99399 * 180.02562 * 18 17 16 36 36 H 1.48500 * 110.00013 * 298.67991 * 19 17 16 37 37 H 1.48497 * 110.00248 * 59.99977 * 19 17 16 38 38 H 1.07998 * 125.56389 * 179.97438 * 20 16 15 39 39 H 1.09003 * 109.47100 * 270.85012 * 22 21 20 40 40 H 1.09002 * 109.46733 * 30.84239 * 22 21 20 41 41 H 1.08993 * 109.47636 * 150.84282 * 22 21 20 42 42 H 1.08999 * 109.47074 * 180.02562 * 23 9 8 43 43 H 1.08997 * 109.46983 * 59.99921 * 23 9 8 44 44 H 1.08999 * 109.47054 * 299.99553 * 24 5 3 45 45 H 1.09001 * 109.47050 * 60.00087 * 24 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4034 2.2093 0.0005 5 6 3.5664 1.2748 0.0063 6 1 3.9525 0.7783 0.8965 7 6 4.1184 0.5845 -1.2427 8 6 5.6463 0.6641 -1.2360 9 6 6.0807 2.1311 -1.2301 10 1 7.1691 2.1878 -1.2249 11 7 5.5620 2.7987 -2.4266 12 6 6.2481 2.7345 -3.5849 13 8 7.3459 2.2101 -3.6136 14 6 5.6717 3.2968 -4.8108 15 6 4.4874 3.9959 -4.9083 16 6 4.3243 4.3422 -6.2532 17 6 3.1700 5.1160 -6.8364 18 8 1.9522 4.4078 -6.5966 19 14 3.4211 5.3168 -8.6715 20 6 5.3878 3.8589 -6.9388 21 7 6.2167 3.2264 -6.0729 22 6 7.4811 2.5741 -6.4223 23 6 5.5286 2.8214 0.0188 24 6 4.0002 2.7420 0.0119 25 1 -0.3634 -1.0276 0.0005 26 1 -0.3633 0.5139 0.8900 27 1 -0.3633 0.5139 -0.8899 28 1 3.8093 -0.4607 -1.2467 29 1 3.7323 1.0810 -2.1328 30 1 6.0396 0.1727 -2.1260 31 1 6.0321 0.1673 -0.3458 32 1 4.7249 3.2870 -2.3852 33 1 3.8129 4.2318 -4.0985 34 1 3.1174 6.0986 -6.3676 35 1 1.1656 4.8486 -6.9460 36 1 4.6680 6.0798 -8.9330 37 1 3.4949 3.9844 -9.3230 38 1 5.5508 3.9640 -8.0012 39 1 7.2920 1.5341 -6.6885 40 1 7.9338 3.0894 -7.2694 41 1 8.1582 2.6133 -5.5691 42 1 5.8376 3.8666 0.0228 43 1 5.9144 2.3246 0.9090 44 1 3.6141 3.2384 -0.8784 45 1 3.6069 3.2337 0.9016 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14474850_10803934.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:49:45 Heat of formation + Delta-G solvation = -104.363866 kcal Electronic energy + Delta-G solvation = -28438.310547 eV Core-core repulsion = 24423.264646 eV Total energy + Delta-G solvation = -4015.045902 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 323.161 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -42.56519 -41.78541 -40.63391 -38.83541 -37.61944 -37.37341 -35.06757 -33.91247 -32.10776 -31.93336 -30.35274 -28.63363 -28.31420 -25.72151 -25.03427 -23.91250 -23.78725 -21.77779 -21.25717 -20.53003 -20.14355 -18.73719 -18.54685 -18.23823 -17.77379 -17.44301 -17.17687 -16.75162 -16.60331 -16.06688 -15.78078 -15.29158 -15.17626 -15.04472 -14.92251 -14.78471 -14.34794 -14.20465 -14.06951 -13.90297 -13.76709 -13.63494 -13.37863 -13.27239 -13.19931 -13.09816 -12.94911 -12.41466 -12.33181 -12.06893 -11.90387 -11.77806 -11.66764 -11.46671 -11.14443 -10.96511 -10.25435 -10.11687 -9.64084 -9.23735 -4.98841 0.45343 1.22683 1.31930 1.48106 1.59177 1.70396 1.73045 2.01387 2.31785 2.40480 3.41628 3.49097 3.54994 3.60110 3.72647 3.83139 3.89135 3.90743 3.95305 4.09153 4.11294 4.19160 4.22813 4.26471 4.26678 4.30418 4.31282 4.38150 4.51587 4.60588 4.61541 4.64238 4.68071 4.78814 4.88537 4.93232 4.96903 5.04658 5.15094 5.16431 5.20164 5.42570 5.47114 5.66764 5.91147 6.10211 6.47094 6.74301 6.76854 7.19047 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.358 6.358 3 C 0.463 3.537 4 O -0.505 6.505 5 C -0.080 4.080 6 H 0.113 0.887 7 C -0.111 4.111 8 C -0.129 4.129 9 C 0.145 3.855 10 H 0.097 0.903 11 N -0.713 5.713 12 C 0.594 3.406 13 O -0.547 6.547 14 C -0.053 4.053 15 C -0.109 4.109 16 C -0.161 4.161 17 C -0.034 4.034 18 O -0.547 6.547 19 Si 0.682 3.318 20 C 0.019 3.981 21 N -0.403 5.403 22 C 0.062 3.938 23 C -0.127 4.127 24 C -0.107 4.107 25 H 0.102 0.898 26 H 0.063 0.937 27 H 0.064 0.936 28 H 0.080 0.920 29 H 0.069 0.931 30 H 0.075 0.925 31 H 0.080 0.920 32 H 0.403 0.597 33 H 0.146 0.854 34 H 0.071 0.929 35 H 0.379 0.621 36 H -0.257 1.257 37 H -0.253 1.253 38 H 0.164 0.836 39 H 0.079 0.921 40 H 0.084 0.916 41 H 0.109 0.891 42 H 0.080 0.920 43 H 0.086 0.914 44 H 0.071 0.929 45 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.830 0.987 -0.330 2.105 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.275 6.275 3 C 0.306 3.694 4 O -0.392 6.392 5 C -0.099 4.099 6 H 0.131 0.869 7 C -0.149 4.149 8 C -0.168 4.168 9 C 0.041 3.959 10 H 0.115 0.885 11 N -0.365 5.365 12 C 0.383 3.617 13 O -0.426 6.426 14 C -0.166 4.166 15 C -0.135 4.135 16 C -0.168 4.168 17 C -0.145 4.145 18 O -0.353 6.353 19 Si 0.584 3.416 20 C -0.118 4.118 21 N -0.075 5.075 22 C -0.079 4.079 23 C -0.165 4.165 24 C -0.145 4.145 25 H 0.121 0.879 26 H 0.082 0.918 27 H 0.083 0.917 28 H 0.098 0.902 29 H 0.088 0.912 30 H 0.093 0.907 31 H 0.099 0.901 32 H 0.239 0.761 33 H 0.164 0.836 34 H 0.088 0.912 35 H 0.226 0.774 36 H -0.182 1.182 37 H -0.178 1.178 38 H 0.181 0.819 39 H 0.097 0.903 40 H 0.102 0.898 41 H 0.128 0.872 42 H 0.098 0.902 43 H 0.105 0.895 44 H 0.090 0.910 45 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges 0.026 0.101 -0.806 0.813 hybrid contribution -0.521 0.174 0.385 0.671 sum -0.495 0.275 -0.420 0.705 Atomic orbital electron populations 1.23313 0.75980 1.03952 1.02710 1.86505 1.23694 1.33390 1.83876 1.23815 0.92044 0.81421 0.72158 1.90689 1.67200 1.36343 1.44942 1.21153 0.86948 0.99427 1.02332 0.86944 1.21514 0.96019 1.01416 0.95913 1.21950 0.94967 0.96220 1.03615 1.21035 0.99908 0.91577 0.83423 0.88534 1.45776 1.26459 1.55128 1.09185 1.16907 0.84151 0.78355 0.82315 1.90783 1.19860 1.46024 1.85931 1.20050 0.98207 1.12301 0.86087 1.21163 0.95257 1.00302 0.96806 1.18698 0.96621 1.07548 0.93902 1.23943 0.84640 0.95511 1.10451 1.86506 1.15586 1.50468 1.82734 0.95301 0.86870 0.82864 0.76587 1.21644 0.93178 1.01505 0.95459 1.43746 1.17783 1.40081 1.05871 1.22391 0.83389 0.98086 1.04020 1.21874 0.94970 1.02099 0.97514 1.21478 0.95495 0.93480 1.04018 0.87913 0.91778 0.91724 0.90178 0.91203 0.90661 0.90095 0.76064 0.83605 0.91159 0.77365 1.18170 1.17784 0.81879 0.90285 0.89759 0.87244 0.90169 0.89513 0.91042 0.90130 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.56 101.05 1.07 1.06 16 2 O -0.36 -0.57 10.48 -39.24 -0.41 -0.98 16 3 C 0.46 0.86 7.25 36.01 0.26 1.12 16 4 O -0.50 -2.31 15.73 -18.75 -0.30 -2.60 16 5 C -0.08 0.08 2.63 -91.77 -0.24 -0.16 16 6 H 0.11 -0.29 8.14 -51.93 -0.42 -0.71 16 7 C -0.11 0.10 4.98 -26.73 -0.13 -0.03 16 8 C -0.13 0.14 5.60 -26.73 -0.15 -0.01 16 9 C 0.14 -0.12 2.83 -67.93 -0.19 -0.31 16 10 H 0.10 0.04 7.50 -51.93 -0.39 -0.35 16 11 N -0.71 -0.19 4.22 -55.12 -0.23 -0.43 16 12 C 0.59 1.88 7.74 -12.85 -0.10 1.78 16 13 O -0.55 -3.01 14.26 5.20 0.07 -2.94 16 14 C -0.05 -0.18 6.89 -81.98 -0.56 -0.75 16 15 C -0.11 -0.30 10.29 -39.12 -0.40 -0.70 16 16 C -0.16 -0.47 5.47 -105.02 -0.57 -1.05 16 17 C -0.03 -0.02 3.01 36.01 0.11 0.09 16 18 O -0.55 -0.45 12.86 -35.23 -0.45 -0.91 16 19 Si 0.68 -0.63 30.59 -169.99 -5.20 -5.83 16 20 C 0.02 0.05 9.94 -16.91 -0.17 -0.12 16 21 N -0.40 -1.24 3.16 -120.24 -0.38 -1.62 16 22 C 0.06 0.05 10.65 59.85 0.64 0.69 16 23 C -0.13 0.32 5.61 -26.70 -0.15 0.17 16 24 C -0.11 0.16 4.32 -26.71 -0.12 0.04 16 25 H 0.10 -0.26 8.14 -51.93 -0.42 -0.69 16 26 H 0.06 -0.02 8.13 -51.93 -0.42 -0.44 16 27 H 0.06 0.00 8.13 -51.93 -0.42 -0.43 16 28 H 0.08 -0.06 8.12 -51.93 -0.42 -0.49 16 29 H 0.07 0.02 7.60 -51.93 -0.39 -0.38 16 30 H 0.07 0.06 8.14 -51.93 -0.42 -0.36 16 31 H 0.08 -0.19 8.14 -51.93 -0.42 -0.62 16 32 H 0.40 -0.36 5.77 -40.82 -0.24 -0.60 16 33 H 0.15 0.14 7.45 -52.49 -0.39 -0.25 16 34 H 0.07 -0.07 7.96 -51.93 -0.41 -0.48 16 35 H 0.38 -1.60 8.74 45.56 0.40 -1.20 16 36 H -0.26 -0.34 7.11 56.52 0.40 0.06 16 37 H -0.25 -0.57 7.11 56.52 0.40 -0.17 16 38 H 0.16 0.18 6.19 -52.49 -0.32 -0.14 16 39 H 0.08 0.02 8.14 -51.93 -0.42 -0.40 16 40 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 41 H 0.11 0.22 6.19 -51.93 -0.32 -0.10 16 42 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 43 H 0.09 -0.32 8.14 -51.93 -0.42 -0.74 16 44 H 0.07 -0.06 6.46 -51.93 -0.34 -0.40 16 45 H 0.08 -0.08 8.10 -51.93 -0.42 -0.50 16 LS Contribution 364.76 15.07 5.50 5.50 Total: 0.00 -9.72 364.76 -8.79 -18.51 By element: Atomic # 1 Polarization: -3.86 SS G_CDS: -6.67 Total: -10.54 kcal Atomic # 6 Polarization: 2.55 SS G_CDS: -0.72 Total: 1.83 kcal Atomic # 7 Polarization: -1.43 SS G_CDS: -0.61 Total: -2.05 kcal Atomic # 8 Polarization: -6.34 SS G_CDS: -1.08 Total: -7.42 kcal Atomic # 14 Polarization: -0.63 SS G_CDS: -5.20 Total: -5.83 kcal Total LS contribution 5.50 Total: 5.50 kcal Total: -9.72 -8.79 -18.51 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14474850_10803934.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -85.852 kcal (2) G-P(sol) polarization free energy of solvation -9.720 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -95.573 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.791 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.512 kcal (6) G-S(sol) free energy of system = (1) + (5) -104.364 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds