Wall clock time and date at job start Sun Mar 7 2021 00:50:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45203 * 1 3 3 C 1.34229 * 116.99579 * 2 1 4 4 O 1.20824 * 120.00177 * 0.02562 * 3 2 1 5 5 C 1.50703 * 119.99682 * 179.97438 * 3 2 1 6 6 H 1.09001 * 109.46980 * 299.99944 * 5 3 2 7 7 C 1.53006 * 109.47126 * 59.99713 * 5 3 2 8 8 C 1.52997 * 109.47127 * 179.97438 * 7 5 3 9 9 C 1.53000 * 109.47060 * 300.00449 * 8 7 5 10 10 H 1.09004 * 109.46724 * 180.02562 * 9 8 7 11 11 N 1.46500 * 109.47023 * 299.99760 * 9 8 7 12 12 C 1.34780 * 119.99887 * 205.00438 * 11 9 8 13 13 O 1.21569 * 120.00070 * 359.97438 * 12 11 9 14 14 C 1.47693 * 119.99839 * 180.02562 * 12 11 9 15 15 C 1.39804 * 120.15715 * 179.71907 * 14 12 11 16 16 F 1.35108 * 120.08136 * 0.02562 * 15 14 12 17 17 C 1.38311 * 119.83574 * 179.78663 * 15 14 12 18 18 C 1.38186 * 120.14266 * 0.47267 * 17 15 14 19 19 C 1.50704 * 119.84297 * 179.76228 * 18 17 15 20 20 O 1.42896 * 109.47293 * 255.02141 * 19 18 17 21 21 Si 1.86298 * 109.46944 * 15.02175 * 19 18 17 22 22 C 1.38658 * 120.31590 * 359.77893 * 18 17 15 23 23 F 1.35099 * 119.91727 * 179.97438 * 22 18 17 24 24 C 1.38068 * 120.16396 * 359.97438 * 22 18 17 25 25 C 1.52996 * 109.47328 * 60.00126 * 9 8 7 26 26 C 1.52997 * 109.47084 * 179.97438 * 5 3 2 27 27 H 1.09001 * 109.46940 * 180.02562 * 1 2 3 28 28 H 1.09003 * 109.47120 * 299.99507 * 1 2 3 29 29 H 1.09000 * 109.47246 * 60.00167 * 1 2 3 30 30 H 1.08998 * 109.46505 * 59.99690 * 7 5 3 31 31 H 1.08996 * 109.46884 * 300.00571 * 7 5 3 32 32 H 1.09002 * 109.47153 * 180.02562 * 8 7 5 33 33 H 1.09001 * 109.46832 * 60.00321 * 8 7 5 34 34 H 0.96999 * 120.00261 * 25.00074 * 11 9 8 35 35 H 1.07997 * 119.92854 * 180.22906 * 17 15 14 36 36 H 1.09000 * 109.47193 * 135.01832 * 19 18 17 37 37 H 0.96699 * 113.99774 * 59.99227 * 20 19 18 38 38 H 1.48502 * 109.99876 * 180.02562 * 21 19 18 39 39 H 1.48502 * 109.99698 * 301.31789 * 21 19 18 40 40 H 1.08004 * 120.07353 * 180.02562 * 24 22 18 41 41 H 1.08992 * 109.47554 * 59.99639 * 25 9 8 42 42 H 1.09004 * 109.47108 * 179.97438 * 25 9 8 43 43 H 1.09002 * 109.47045 * 60.00033 * 26 5 3 44 44 H 1.09001 * 109.47375 * 299.99958 * 26 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4032 2.2093 0.0005 5 6 3.5663 1.2749 0.0006 6 1 3.9556 0.7810 0.8908 7 6 4.1139 0.5810 -1.2483 8 6 5.6417 0.6617 -1.2480 9 6 6.0750 2.1291 -1.2485 10 1 7.1635 2.1865 -1.2487 11 7 5.5512 2.7925 -2.4450 12 6 6.1715 3.8834 -2.9368 13 8 7.1654 4.3170 -2.3872 14 6 5.6431 4.5526 -4.1427 15 6 6.2805 5.6877 -4.6523 16 9 7.3830 6.1762 -4.0429 17 6 5.7825 6.3065 -5.7845 18 6 4.6522 5.8109 -6.4060 19 6 4.1123 6.4936 -7.6362 20 8 2.9398 7.2351 -7.2937 21 14 5.4017 7.6515 -8.3201 22 6 4.0121 4.6885 -5.9028 23 9 2.9073 4.2110 -6.5164 24 6 4.5011 4.0576 -4.7762 25 6 5.5275 2.8229 0.0004 26 6 4.0001 2.7421 -0.0002 27 1 -0.3633 -1.0277 0.0005 28 1 -0.3633 0.5138 0.8900 29 1 -0.3634 0.5138 -0.8900 30 1 3.7244 1.0749 -2.1385 31 1 3.8047 -0.4642 -1.2482 32 1 6.0318 0.1677 -2.1380 33 1 6.0314 0.1680 -0.3578 34 1 4.7579 2.4468 -2.8833 35 1 6.2759 7.1813 -6.1816 36 1 3.8619 5.7444 -8.3873 37 1 3.0887 7.9212 -6.6287 38 1 4.8813 8.3316 -9.5333 39 1 5.7749 8.6586 -7.2946 40 1 4.0016 3.1833 -4.3858 41 1 5.9171 2.3293 0.8906 42 1 5.8365 3.8682 0.0003 43 1 3.6099 3.2368 0.8893 44 1 3.6107 3.2357 -0.8907 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14474850_12360598.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:50:52 Heat of formation + Delta-G solvation = -210.096719 kcal Electronic energy + Delta-G solvation = -32601.684878 eV Core-core repulsion = 27735.883494 eV Total energy + Delta-G solvation = -4865.801384 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 356.131 amu Computer time = 1.14 seconds Orbital eigenvalues (eV) -50.13336 -50.11974 -42.01504 -41.37412 -40.21307 -39.00944 -37.78987 -37.54791 -35.11953 -33.49370 -31.90974 -31.41009 -31.29472 -28.66269 -27.77259 -25.04407 -24.43405 -23.97865 -23.69014 -22.22506 -21.77913 -20.27323 -19.86016 -18.92230 -18.69813 -18.53405 -18.02751 -17.82428 -17.48777 -17.38071 -17.07370 -16.62610 -16.56776 -16.33890 -16.25558 -15.96483 -15.70896 -15.53418 -15.24835 -15.04793 -14.95009 -14.59196 -14.36309 -14.17351 -13.89149 -13.85140 -13.58964 -13.30964 -13.26164 -13.18616 -13.01517 -12.95365 -12.42939 -12.27155 -12.03643 -11.93965 -11.86370 -11.64133 -11.39993 -11.24933 -11.19370 -10.80100 -10.62596 -10.18873 -9.84768 -4.97064 -0.83401 -0.34124 1.09853 1.14524 1.38069 1.53420 1.70210 1.88155 1.90873 2.22912 2.76259 2.82287 3.08475 3.21516 3.41246 3.45099 3.50065 3.62682 3.66427 3.75683 3.90684 4.05665 4.12150 4.15864 4.26528 4.27719 4.29754 4.33926 4.35918 4.39253 4.41498 4.52226 4.60737 4.66455 4.68832 4.70146 4.78853 4.95467 5.05378 5.10509 5.13169 5.22208 5.28288 5.34678 5.35630 5.45683 6.29637 6.36301 6.65684 6.98855 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.359 6.359 3 C 0.461 3.539 4 O -0.543 6.543 5 C -0.075 4.075 6 H 0.134 0.866 7 C -0.110 4.110 8 C -0.116 4.116 9 C 0.141 3.859 10 H 0.086 0.914 11 N -0.703 5.703 12 C 0.558 3.442 13 O -0.556 6.556 14 C -0.148 4.148 15 C 0.141 3.859 16 F -0.123 7.123 17 C -0.129 4.129 18 C -0.091 4.091 19 C -0.089 4.089 20 O -0.541 6.541 21 Si 0.776 3.224 22 C 0.103 3.897 23 F -0.128 7.128 24 C -0.081 4.081 25 C -0.125 4.125 26 C -0.099 4.099 27 H 0.129 0.871 28 H 0.057 0.943 29 H 0.060 0.940 30 H 0.066 0.934 31 H 0.098 0.902 32 H 0.091 0.909 33 H 0.106 0.894 34 H 0.409 0.591 35 H 0.173 0.827 36 H 0.133 0.867 37 H 0.390 0.610 38 H -0.294 1.294 39 H -0.270 1.270 40 H 0.173 0.827 41 H 0.097 0.903 42 H 0.052 0.948 43 H 0.060 0.940 44 H 0.058 0.942 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.574 -6.581 -1.228 6.719 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.275 6.275 3 C 0.306 3.694 4 O -0.433 6.433 5 C -0.094 4.094 6 H 0.152 0.848 7 C -0.147 4.147 8 C -0.153 4.153 9 C 0.037 3.963 10 H 0.104 0.896 11 N -0.356 5.356 12 C 0.345 3.655 13 O -0.435 6.435 14 C -0.152 4.152 15 C 0.120 3.880 16 F -0.101 7.101 17 C -0.148 4.148 18 C -0.092 4.092 19 C -0.197 4.197 20 O -0.349 6.349 21 Si 0.680 3.320 22 C 0.084 3.916 23 F -0.107 7.107 24 C -0.100 4.100 25 C -0.163 4.163 26 C -0.137 4.137 27 H 0.147 0.853 28 H 0.076 0.924 29 H 0.079 0.921 30 H 0.085 0.915 31 H 0.116 0.884 32 H 0.110 0.890 33 H 0.124 0.876 34 H 0.248 0.752 35 H 0.190 0.810 36 H 0.150 0.850 37 H 0.239 0.761 38 H -0.221 1.221 39 H -0.197 1.197 40 H 0.191 0.809 41 H 0.116 0.884 42 H 0.071 0.929 43 H 0.079 0.921 44 H 0.077 0.923 Dipole moment (debyes) X Y Z Total from point charges 0.966 -5.615 -1.437 5.876 hybrid contribution -1.676 0.816 0.740 2.006 sum -0.711 -4.799 -0.697 4.901 Atomic orbital electron populations 1.23504 0.75278 1.05564 1.02254 1.86507 1.24483 1.32980 1.83531 1.24417 0.93068 0.80979 0.70971 1.90686 1.68213 1.37623 1.46747 1.21238 0.84968 0.99116 1.04044 0.84797 1.21574 0.96108 1.02192 0.94870 1.21835 0.94552 0.93187 1.05772 1.21167 0.99249 0.92779 0.83100 0.89605 1.45981 1.31317 1.28501 1.29849 1.18015 0.83202 0.80996 0.83297 1.90865 1.26598 1.65037 1.61049 1.19888 0.98579 0.97911 0.98838 1.17775 0.84712 0.92980 0.92504 1.91608 1.49917 1.86526 1.82047 1.21117 0.96823 1.02266 0.94559 1.20449 0.94945 0.95185 0.98653 1.25351 0.96277 1.01944 0.96116 1.86654 1.32266 1.52112 1.63859 0.93821 0.81554 0.79199 0.77466 1.17362 0.85825 0.94827 0.93634 1.91568 1.49937 1.87309 1.81853 1.21299 0.94361 1.00773 0.93574 1.21887 0.94299 1.01252 0.98902 1.21333 0.95896 0.93763 1.02697 0.85266 0.92412 0.92140 0.91531 0.88362 0.89016 0.87609 0.75235 0.81047 0.84975 0.76057 1.22098 1.19671 0.80922 0.88428 0.92919 0.92078 0.92313 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.07 10.56 113.37 1.20 1.13 16 2 O -0.36 -0.07 10.47 -51.41 -0.54 -0.60 16 3 C 0.46 0.87 7.26 71.24 0.52 1.39 16 4 O -0.54 -5.10 15.73 21.97 0.35 -4.76 16 5 C -0.07 0.36 2.63 -11.54 -0.03 0.33 16 6 H 0.13 -1.14 8.14 -2.39 -0.02 -1.16 16 7 C -0.11 0.99 4.96 30.60 0.15 1.14 16 8 C -0.12 1.17 5.61 30.59 0.17 1.35 16 9 C 0.14 -0.59 2.78 44.99 0.13 -0.46 16 10 H 0.09 -0.07 7.58 -2.39 -0.02 -0.09 16 11 N -0.70 2.00 4.18 -445.55 -1.86 0.14 16 12 C 0.56 2.30 7.73 86.74 0.67 2.98 16 13 O -0.56 -6.93 15.00 -3.93 -0.06 -6.99 16 14 C -0.15 -0.22 5.88 -20.06 -0.12 -0.34 16 15 C 0.14 0.44 7.28 22.67 0.17 0.60 16 16 F -0.12 -1.07 15.55 44.97 0.70 -0.37 16 17 C -0.13 0.23 8.62 22.27 0.19 0.43 16 18 C -0.09 0.19 5.27 -19.78 -0.10 0.08 16 19 C -0.09 0.24 2.44 71.24 0.17 0.41 16 20 O -0.54 -0.47 12.88 -148.98 -1.92 -2.39 16 21 Si 0.78 -3.60 30.24 68.60 2.07 -1.53 16 22 C 0.10 -0.09 7.23 22.33 0.16 0.08 16 23 F -0.13 -0.26 16.73 44.97 0.75 0.50 16 24 C -0.08 0.23 9.51 22.57 0.21 0.45 16 25 C -0.13 0.33 5.60 30.58 0.17 0.50 16 26 C -0.10 0.15 4.33 30.58 0.13 0.28 16 27 H 0.13 -1.04 8.14 -2.39 -0.02 -1.06 16 28 H 0.06 -0.06 8.13 -2.39 -0.02 -0.08 16 29 H 0.06 -0.10 8.13 -2.39 -0.02 -0.12 16 30 H 0.07 -0.62 6.50 -2.39 -0.02 -0.63 16 31 H 0.10 -1.01 8.11 -2.39 -0.02 -1.03 16 32 H 0.09 -1.04 8.14 -2.39 -0.02 -1.06 16 33 H 0.11 -1.33 8.14 -2.39 -0.02 -1.35 16 34 H 0.41 -3.08 4.90 -92.71 -0.45 -3.54 16 35 H 0.17 -0.88 4.83 -2.91 -0.01 -0.89 16 36 H 0.13 -0.50 7.89 -2.39 -0.02 -0.52 16 37 H 0.39 -2.08 8.70 -74.06 -0.64 -2.72 16 38 H -0.29 -0.88 7.11 99.48 0.71 -0.17 16 39 H -0.27 0.52 6.68 99.48 0.66 1.18 16 40 H 0.17 -1.50 6.41 -2.91 -0.02 -1.51 16 41 H 0.10 -0.59 8.14 -2.39 -0.02 -0.61 16 42 H 0.05 0.16 8.14 -2.38 -0.02 0.14 16 43 H 0.06 0.10 8.10 -2.39 -0.02 0.08 16 44 H 0.06 0.06 7.56 -2.39 -0.02 0.05 16 Total: 0.00 -24.04 367.96 3.26 -20.78 By element: Atomic # 1 Polarization: -15.09 SS G_CDS: -0.02 Total: -15.12 kcal Atomic # 6 Polarization: 6.55 SS G_CDS: 3.79 Total: 10.34 kcal Atomic # 7 Polarization: 2.00 SS G_CDS: -1.86 Total: 0.14 kcal Atomic # 8 Polarization: -12.57 SS G_CDS: -2.17 Total: -14.74 kcal Atomic # 9 Polarization: -1.33 SS G_CDS: 1.45 Total: 0.12 kcal Atomic # 14 Polarization: -3.60 SS G_CDS: 2.07 Total: -1.53 kcal Total: -24.04 3.26 -20.78 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14474850_12360598.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -189.313 kcal (2) G-P(sol) polarization free energy of solvation -24.043 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -213.357 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.260 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.783 kcal (6) G-S(sol) free energy of system = (1) + (5) -210.097 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.14 seconds