Wall clock time and date at job start Sun Mar 7 2021 00:51:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45206 * 1 3 3 C 1.34230 * 117.00016 * 2 1 4 4 O 1.20824 * 119.99770 * 0.02562 * 3 2 1 5 5 C 1.50695 * 120.00012 * 179.97438 * 3 2 1 6 6 H 1.09001 * 109.47127 * 300.00150 * 5 3 2 7 7 C 1.53001 * 109.47179 * 60.00052 * 5 3 2 8 8 C 1.53001 * 109.47117 * 180.02562 * 7 5 3 9 9 C 1.53000 * 109.46733 * 299.99986 * 8 7 5 10 10 H 1.09003 * 109.46690 * 180.02562 * 9 8 7 11 11 N 1.46497 * 109.47377 * 299.99672 * 9 8 7 12 12 C 1.34779 * 120.00644 * 275.00789 * 11 9 8 13 13 O 1.21627 * 119.99320 * 359.97438 * 12 11 9 14 14 C 1.47283 * 120.00397 * 179.97438 * 12 11 9 15 15 C 1.40368 * 120.04842 * 180.02562 * 14 12 11 16 16 O 1.35669 * 120.13577 * 359.97438 * 15 14 12 17 17 C 1.38318 * 119.72397 * 179.72198 * 15 14 12 18 18 C 1.39569 * 119.81704 * 0.51195 * 17 15 14 19 19 C 1.47564 * 119.95450 * 179.76774 * 18 17 15 20 20 C 1.36115 * 125.93924 * 179.72201 * 19 18 17 21 21 C 1.40797 * 106.72767 * 179.97438 * 20 19 18 22 22 C 1.34828 * 107.05339 * 0.02562 * 21 20 19 23 23 C 1.50704 * 125.65400 * 180.02562 * 22 21 20 24 24 O 1.42892 * 109.47116 * 64.96950 * 23 22 21 25 25 Si 1.86300 * 109.47132 * 184.97326 * 23 22 21 26 26 O 1.34228 * 108.69468 * 359.97438 * 22 21 20 27 27 C 1.39960 * 120.08376 * 359.48420 * 18 17 15 28 28 C 1.36388 * 120.28404 * 0.26037 * 27 18 17 29 29 C 1.52996 * 109.47270 * 60.00475 * 9 8 7 30 30 C 1.52997 * 109.47236 * 180.02562 * 5 3 2 31 31 H 1.09000 * 109.47295 * 179.97438 * 1 2 3 32 32 H 1.09002 * 109.47182 * 300.00036 * 1 2 3 33 33 H 1.09003 * 109.47036 * 59.99972 * 1 2 3 34 34 H 1.09003 * 109.46727 * 299.99994 * 7 5 3 35 35 H 1.09001 * 109.47011 * 60.00027 * 7 5 3 36 36 H 1.09004 * 109.47013 * 180.02562 * 8 7 5 37 37 H 1.09001 * 109.47331 * 60.00011 * 8 7 5 38 38 H 0.97000 * 119.99869 * 95.00215 * 11 9 8 39 39 H 0.96702 * 113.99962 * 89.99913 * 16 15 14 40 40 H 1.08008 * 120.09193 * 180.27019 * 17 15 14 41 41 H 1.07994 * 126.63208 * 359.73556 * 20 19 18 42 42 H 1.08003 * 126.47259 * 179.97438 * 21 20 19 43 43 H 1.09003 * 109.46619 * 304.97236 * 23 22 21 44 44 H 0.96699 * 114.00113 * 60.00451 * 24 23 22 45 45 H 1.48502 * 110.00020 * 58.68071 * 25 23 22 46 46 H 1.48497 * 109.99559 * 179.97438 * 25 23 22 47 47 H 1.08005 * 119.86072 * 180.23268 * 27 18 17 48 48 H 1.07996 * 119.91265 * 180.02562 * 28 27 18 49 49 H 1.08995 * 109.47694 * 59.99466 * 29 9 8 50 50 H 1.09005 * 109.46914 * 180.02562 * 29 9 8 51 51 H 1.09004 * 109.47171 * 59.99957 * 30 5 3 52 52 H 1.09001 * 109.47031 * 300.00020 * 30 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0615 1.1960 0.0000 4 8 1.4034 2.2093 0.0005 5 6 3.5663 1.2749 0.0006 6 1 3.9557 0.7809 0.8908 7 6 4.1139 0.5810 -1.2483 8 6 5.6418 0.6606 -1.2474 9 6 6.0761 2.1277 -1.2472 10 1 7.1646 2.1843 -1.2470 11 7 5.5533 2.7919 -2.4437 12 6 6.2351 2.7244 -3.6043 13 8 7.2848 2.1124 -3.6581 14 6 5.7092 3.3918 -4.8073 15 6 6.4183 3.3216 -6.0167 16 8 7.5895 2.6399 -6.0810 17 6 5.9153 3.9460 -7.1438 18 6 4.7126 4.6500 -7.0687 19 6 4.1758 5.3216 -8.2681 20 6 3.0174 6.0333 -8.3341 21 6 2.8989 6.4925 -9.6598 22 6 3.9781 6.0436 -10.3317 23 6 4.2731 6.2944 -11.7882 24 8 4.4928 7.6909 -11.9960 25 14 5.7969 5.3451 -12.2856 26 8 4.7470 5.3371 -9.4881 27 6 4.0120 4.7149 -5.8588 28 6 4.5018 4.0962 -4.7464 29 6 5.5286 2.8214 0.0017 30 6 4.0002 2.7420 0.0011 31 1 -0.3634 -1.0277 -0.0005 32 1 -0.3634 0.5138 0.8900 33 1 -0.3633 0.5139 -0.8900 34 1 3.8048 -0.4642 -1.2482 35 1 3.7245 1.0750 -2.1385 36 1 6.0319 0.1667 -2.1374 37 1 6.0309 0.1664 -0.3571 38 1 4.7163 3.2803 -2.4007 39 1 7.4893 1.7070 -6.3149 40 1 6.4538 3.8922 -8.0785 41 1 2.3217 6.2082 -7.5268 42 1 2.0948 7.0906 -10.0625 43 1 3.4271 5.9658 -12.3919 44 1 5.2324 8.0525 -11.4888 45 1 5.5928 3.8941 -12.0444 46 1 6.0980 5.5836 -13.7200 47 1 3.0796 5.2575 -5.8057 48 1 3.9560 4.1498 -3.8160 49 1 5.9176 2.3272 0.8920 50 1 5.8376 3.8667 0.0016 51 1 3.6101 3.2360 0.8911 52 1 3.6108 3.2364 -0.8889 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14474850_12807986.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:51:14 Heat of formation + Delta-G solvation = -146.940794 kcal Electronic energy + Delta-G solvation = -37847.506257 eV Core-core repulsion = 32745.771046 eV Total energy + Delta-G solvation = -5101.735211 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 402.165 amu Computer time = 1.63 seconds Orbital eigenvalues (eV) -43.76164 -42.00241 -41.48767 -40.22912 -38.75738 -38.08401 -37.82288 -37.50149 -34.98671 -34.24850 -33.48537 -31.88146 -31.57222 -31.17679 -30.26604 -28.59452 -27.05518 -25.07217 -24.38972 -24.05181 -23.70961 -22.63859 -22.17372 -21.73731 -21.39399 -20.19963 -19.75293 -18.94129 -18.61740 -18.52972 -17.81061 -17.68251 -17.55887 -17.46603 -17.04447 -16.60555 -16.47113 -16.21923 -16.10265 -15.80918 -15.66599 -15.25106 -15.04837 -14.83845 -14.73142 -14.41011 -14.29479 -14.25980 -14.01080 -13.89931 -13.87211 -13.70275 -13.60870 -13.47128 -13.25929 -13.14127 -12.92267 -12.83586 -12.71877 -12.26374 -12.19047 -12.05994 -11.87514 -11.84507 -11.61192 -11.39299 -11.16692 -11.14066 -10.88903 -10.74376 -10.59183 -10.08030 -9.96229 -9.02994 -5.05029 -0.80255 0.13076 0.63116 1.11833 1.12696 1.38503 1.44713 1.73000 1.73457 1.86099 1.93779 2.10661 2.63714 3.01063 3.27938 3.40862 3.48570 3.58268 3.59503 3.69105 3.70268 3.86063 3.96315 3.97916 4.00084 4.06744 4.16220 4.19984 4.27043 4.28981 4.30200 4.34730 4.39681 4.42525 4.44397 4.61209 4.64278 4.68609 4.70028 4.77601 4.81208 4.86616 4.98412 5.05131 5.07620 5.09116 5.11388 5.15007 5.20045 5.27046 5.30822 5.38377 5.40266 5.50392 5.54524 5.94772 6.47776 6.58614 6.67201 6.70342 7.18837 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.365 6.365 3 C 0.462 3.538 4 O -0.536 6.536 5 C -0.075 4.075 6 H 0.131 0.869 7 C -0.102 4.102 8 C -0.123 4.123 9 C 0.142 3.858 10 H 0.079 0.921 11 N -0.709 5.709 12 C 0.557 3.443 13 O -0.558 6.558 14 C -0.179 4.179 15 C 0.163 3.837 16 O -0.493 6.493 17 C -0.151 4.151 18 C 0.025 3.975 19 C 0.007 3.993 20 C -0.174 4.174 21 C -0.184 4.184 22 C -0.052 4.052 23 C -0.025 4.025 24 O -0.540 6.540 25 Si 0.769 3.231 26 O -0.173 6.173 27 C -0.111 4.111 28 C -0.055 4.055 29 C -0.117 4.117 30 C -0.103 4.103 31 H 0.126 0.874 32 H 0.061 0.939 33 H 0.061 0.939 34 H 0.080 0.920 35 H 0.061 0.939 36 H 0.057 0.943 37 H 0.095 0.905 38 H 0.407 0.593 39 H 0.408 0.592 40 H 0.142 0.858 41 H 0.179 0.821 42 H 0.165 0.835 43 H 0.139 0.861 44 H 0.399 0.601 45 H -0.294 1.294 46 H -0.277 1.277 47 H 0.165 0.835 48 H 0.163 0.837 49 H 0.101 0.899 50 H 0.083 0.917 51 H 0.077 0.923 52 H 0.068 0.932 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.258 -0.093 3.482 4.769 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.281 6.281 3 C 0.307 3.693 4 O -0.426 6.426 5 C -0.094 4.094 6 H 0.149 0.851 7 C -0.140 4.140 8 C -0.162 4.162 9 C 0.038 3.962 10 H 0.097 0.903 11 N -0.363 5.363 12 C 0.345 3.655 13 O -0.438 6.438 14 C -0.182 4.182 15 C 0.116 3.884 16 O -0.306 6.306 17 C -0.169 4.169 18 C 0.025 3.975 19 C -0.043 4.043 20 C -0.193 4.193 21 C -0.203 4.203 22 C -0.102 4.102 23 C -0.135 4.135 24 O -0.349 6.349 25 Si 0.673 3.327 26 O -0.071 6.071 27 C -0.129 4.129 28 C -0.074 4.074 29 C -0.155 4.155 30 C -0.141 4.141 31 H 0.144 0.856 32 H 0.080 0.920 33 H 0.079 0.921 34 H 0.098 0.902 35 H 0.080 0.920 36 H 0.075 0.925 37 H 0.113 0.887 38 H 0.246 0.754 39 H 0.268 0.732 40 H 0.160 0.840 41 H 0.197 0.803 42 H 0.183 0.817 43 H 0.156 0.844 44 H 0.250 0.750 45 H -0.221 1.221 46 H -0.203 1.203 47 H 0.183 0.817 48 H 0.180 0.820 49 H 0.120 0.880 50 H 0.102 0.898 51 H 0.096 0.904 52 H 0.086 0.914 Dipole moment (debyes) X Y Z Total from point charges -2.382 -0.551 2.634 3.594 hybrid contribution -1.528 -0.218 -0.271 1.567 sum -3.910 -0.769 2.363 4.633 Atomic orbital electron populations 1.23500 0.75200 1.05458 1.02417 1.86516 1.24615 1.33389 1.83575 1.24358 0.92985 0.80970 0.71032 1.90667 1.68067 1.37238 1.46608 1.21238 0.85055 1.00018 1.03119 0.85082 1.21427 0.95822 1.01283 0.95463 1.21877 0.94797 0.95999 1.03493 1.21067 0.99026 0.92102 0.84034 0.90310 1.46004 1.26324 1.54861 1.09107 1.18153 0.83738 0.79921 0.83659 1.90818 1.23784 1.43840 1.85336 1.20578 0.97954 1.05329 0.94373 1.18454 0.84843 0.93986 0.91074 1.84729 1.25832 1.27684 1.92309 1.21608 0.96161 1.00205 0.98934 1.17909 0.93958 0.95506 0.90163 1.20553 0.95315 1.04489 0.83922 1.22227 0.97778 1.00467 0.98836 1.21828 1.00163 1.04407 0.93952 1.23240 0.93215 0.99449 0.94316 1.24436 1.11589 0.89539 0.87967 1.86529 1.57554 1.20627 1.70154 0.93324 0.82316 0.76746 0.80275 1.83918 1.45843 1.58801 1.18488 1.21011 1.01347 1.00560 0.89987 1.21090 0.92879 0.93576 0.99832 1.21824 0.94181 1.02298 0.97172 1.21452 0.95891 0.93003 1.03727 0.85629 0.92034 0.92061 0.90165 0.92004 0.92455 0.88683 0.75412 0.73166 0.84007 0.80340 0.81728 0.84433 0.74996 1.22122 1.20339 0.81744 0.82010 0.88049 0.89808 0.90402 0.91379 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.07 10.56 113.37 1.20 1.13 16 2 O -0.36 -0.34 10.47 -51.41 -0.54 -0.87 16 3 C 0.46 0.59 7.26 71.23 0.52 1.10 16 4 O -0.54 -3.69 15.73 21.97 0.35 -3.34 16 5 C -0.08 0.37 2.63 -11.54 -0.03 0.34 16 6 H 0.13 -1.09 8.14 -2.39 -0.02 -1.10 16 7 C -0.10 0.47 4.98 30.59 0.15 0.63 16 8 C -0.12 0.48 5.60 30.59 0.17 0.65 16 9 C 0.14 -0.46 2.78 44.99 0.13 -0.33 16 10 H 0.08 0.07 7.57 -2.39 -0.02 0.05 16 11 N -0.71 1.53 4.18 -445.94 -1.86 -0.34 16 12 C 0.56 2.55 7.72 86.62 0.67 3.22 16 13 O -0.56 -6.83 14.80 16.88 0.25 -6.58 16 14 C -0.18 -0.44 5.89 -19.97 -0.12 -0.55 16 15 C 0.16 0.78 6.71 22.81 0.15 0.94 16 16 O -0.49 -3.37 11.56 -68.87 -0.80 -4.17 16 17 C -0.15 -0.45 9.65 22.61 0.22 -0.24 16 18 C 0.03 0.02 5.87 -20.08 -0.12 -0.09 16 19 C 0.01 0.01 7.02 24.24 0.17 0.18 16 20 C -0.17 0.11 10.26 22.40 0.23 0.34 16 21 C -0.18 -0.10 10.78 22.11 0.24 0.14 16 22 C -0.05 -0.07 6.21 24.90 0.15 0.09 16 23 C -0.02 0.03 2.98 71.24 0.21 0.24 16 24 O -0.54 0.75 12.88 -148.98 -1.92 -1.17 16 25 Si 0.77 -0.62 32.11 68.60 2.20 1.59 16 26 O -0.17 -0.55 8.79 -5.92 -0.05 -0.60 16 27 C -0.11 0.40 9.48 22.26 0.21 0.61 16 28 C -0.06 0.20 9.47 22.25 0.21 0.41 16 29 C -0.12 0.89 5.61 30.61 0.17 1.06 16 30 C -0.10 0.61 4.33 30.61 0.13 0.75 16 31 H 0.13 -0.95 8.14 -2.39 -0.02 -0.97 16 32 H 0.06 -0.12 8.13 -2.39 -0.02 -0.14 16 33 H 0.06 -0.12 8.13 -2.39 -0.02 -0.14 16 34 H 0.08 -0.34 8.11 -2.39 -0.02 -0.36 16 35 H 0.06 -0.20 7.61 -2.39 -0.02 -0.22 16 36 H 0.06 0.05 8.14 -2.38 -0.02 0.03 16 37 H 0.09 -0.64 8.14 -2.39 -0.02 -0.66 16 38 H 0.41 -2.64 4.87 -92.71 -0.45 -3.09 16 39 H 0.41 -0.06 9.06 -74.06 -0.67 -0.73 16 40 H 0.14 0.33 7.90 -2.91 -0.02 0.31 16 41 H 0.18 -1.12 7.24 -2.91 -0.02 -1.15 16 42 H 0.17 -0.33 8.06 -2.91 -0.02 -0.36 16 43 H 0.14 -0.31 7.96 -2.39 -0.02 -0.33 16 44 H 0.40 -3.51 8.70 -74.06 -0.64 -4.15 16 45 H -0.29 -1.78 7.11 99.48 0.71 -1.08 16 46 H -0.28 -1.20 7.11 99.48 0.71 -0.49 16 47 H 0.17 -1.52 6.96 -2.91 -0.02 -1.54 16 48 H 0.16 -1.60 6.38 -2.91 -0.02 -1.62 16 49 H 0.10 -1.02 8.14 -2.39 -0.02 -1.04 16 50 H 0.08 -0.64 8.14 -2.38 -0.02 -0.66 16 51 H 0.08 -0.36 8.10 -2.38 -0.02 -0.38 16 52 H 0.07 -0.38 6.47 -2.39 -0.02 -0.40 16 Total: 0.00 -26.66 430.60 1.57 -25.09 By element: Atomic # 1 Polarization: -19.49 SS G_CDS: -0.72 Total: -20.21 kcal Atomic # 6 Polarization: 5.95 SS G_CDS: 4.67 Total: 10.62 kcal Atomic # 7 Polarization: 1.53 SS G_CDS: -1.86 Total: -0.34 kcal Atomic # 8 Polarization: -14.03 SS G_CDS: -2.71 Total: -16.74 kcal Atomic # 14 Polarization: -0.62 SS G_CDS: 2.20 Total: 1.59 kcal Total: -26.66 1.57 -25.09 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14474850_12807986.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -121.853 kcal (2) G-P(sol) polarization free energy of solvation -26.660 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -148.513 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.572 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.088 kcal (6) G-S(sol) free energy of system = (1) + (5) -146.941 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.63 seconds