Wall clock time and date at job start Sun Mar 7 2021 00:51:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45203 * 1 3 3 C 1.34223 * 117.00242 * 2 1 4 4 O 1.20823 * 119.99959 * 359.97438 * 3 2 1 5 5 C 1.50702 * 119.99880 * 180.02562 * 3 2 1 6 6 H 1.08997 * 109.46932 * 299.99343 * 5 3 2 7 7 C 1.52999 * 109.47566 * 59.99833 * 5 3 2 8 8 C 1.53000 * 109.47035 * 180.02562 * 7 5 3 9 9 C 1.52999 * 109.46971 * 299.99503 * 8 7 5 10 10 H 1.09003 * 109.47327 * 180.02562 * 9 8 7 11 11 N 1.46505 * 109.47129 * 300.00374 * 9 8 7 12 12 C 1.34778 * 119.99974 * 274.99802 * 11 9 8 13 13 O 1.21290 * 119.99759 * 0.02562 * 12 11 9 14 14 C 1.50697 * 119.99984 * 180.02562 * 12 11 9 15 15 C 1.50706 * 109.46822 * 180.02562 * 14 12 11 16 16 C 1.38273 * 119.93364 * 90.00163 * 15 14 12 17 17 C 1.38123 * 120.06270 * 180.02562 * 16 15 14 18 18 C 1.38825 * 119.93706 * 359.97438 * 17 16 15 19 19 N 1.40199 * 120.06819 * 179.97438 * 18 17 16 20 20 C 1.36566 * 125.66827 * 310.15449 * 19 18 17 21 21 C 1.34855 * 108.20020 * 180.29869 * 20 19 18 22 22 C 1.40937 * 107.46688 * 359.73745 * 21 20 19 23 23 C 1.34851 * 107.47041 * 0.02562 * 22 21 20 24 24 C 1.50696 * 125.90145 * 179.97438 * 23 22 21 25 25 O 1.42903 * 109.47131 * 150.02340 * 24 23 22 26 26 Si 1.86305 * 109.47185 * 30.02881 * 24 23 22 27 27 C 1.38832 * 119.86729 * 0.25509 * 18 17 16 28 28 C 1.38122 * 119.93024 * 359.49119 * 27 18 17 29 29 C 1.52998 * 109.47112 * 60.00109 * 9 8 7 30 30 C 1.52998 * 109.47171 * 300.00190 * 29 9 8 31 31 H 1.08998 * 109.47126 * 60.00080 * 1 2 3 32 32 H 1.09002 * 109.46719 * 180.02562 * 1 2 3 33 33 H 1.09005 * 109.46862 * 300.00008 * 1 2 3 34 34 H 1.08998 * 109.46355 * 299.99718 * 7 5 3 35 35 H 1.08997 * 109.47395 * 59.99793 * 7 5 3 36 36 H 1.09004 * 109.46938 * 180.02562 * 8 7 5 37 37 H 1.08997 * 109.47385 * 59.99557 * 8 7 5 38 38 H 0.96994 * 120.00305 * 95.00280 * 11 9 8 39 39 H 1.08991 * 109.47100 * 60.00558 * 14 12 11 40 40 H 1.09004 * 109.46901 * 299.99523 * 14 12 11 41 41 H 1.07995 * 119.97405 * 359.97438 * 16 15 14 42 42 H 1.08006 * 120.03144 * 180.02562 * 17 16 15 43 43 H 1.07998 * 125.90337 * 0.03519 * 20 19 18 44 44 H 1.07995 * 126.26632 * 179.73820 * 21 20 19 45 45 H 1.07994 * 126.26762 * 180.02562 * 22 21 20 46 46 H 1.08999 * 109.47358 * 270.02700 * 24 23 22 47 47 H 0.96700 * 114.00311 * 300.00591 * 25 24 23 48 48 H 1.48497 * 110.00233 * 179.97438 * 26 24 23 49 49 H 1.48492 * 109.99800 * 301.31995 * 26 24 23 50 50 H 1.07998 * 120.03339 * 179.72044 * 27 18 17 51 51 H 1.08007 * 119.96544 * 180.25120 * 28 27 18 52 52 H 1.08997 * 109.47040 * 60.00071 * 29 9 8 53 53 H 1.09007 * 109.47205 * 179.97438 * 29 9 8 54 54 H 1.09004 * 109.47106 * 180.02562 * 30 29 9 55 55 H 1.09006 * 109.46965 * 299.99682 * 30 29 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4034 2.2092 -0.0005 5 6 3.5664 1.2747 -0.0006 6 1 3.9564 0.7805 0.8892 7 6 4.1130 0.5813 -1.2501 8 6 5.6409 0.6608 -1.2503 9 6 6.0753 2.1279 -1.2499 10 1 7.1638 2.1846 -1.2505 11 7 5.5515 2.7925 -2.4459 12 6 6.2325 2.7254 -3.6070 13 8 7.2788 2.1144 -3.6619 14 6 5.6941 3.4095 -4.8370 15 6 6.6365 3.1829 -5.9910 16 6 6.4701 2.0827 -6.8119 17 6 7.3326 1.8722 -7.8700 18 6 8.3670 2.7667 -8.1092 19 7 9.2444 2.5553 -9.1821 20 6 9.8946 1.3872 -9.4608 21 6 10.6493 1.5776 -10.5620 22 6 10.4550 2.9085 -10.9832 23 6 9.5890 3.4827 -10.1236 24 6 9.0922 4.9040 -10.1872 25 8 7.7740 4.9728 -9.6399 26 14 9.0582 5.4711 -11.9615 27 6 8.5343 3.8678 -7.2804 28 6 7.6655 4.0759 -6.2271 29 6 5.5286 2.8213 -0.0005 30 6 4.0007 2.7417 -0.0003 31 1 -0.3633 0.5138 -0.8900 32 1 -0.3633 -1.0277 0.0005 33 1 -0.3633 0.5139 0.8900 34 1 3.8039 -0.4639 -1.2501 35 1 3.7230 1.0755 -2.1399 36 1 6.0303 0.1672 -2.1407 37 1 6.0306 0.1664 -0.3605 38 1 4.7146 3.2809 -2.4021 39 1 5.6022 4.4789 -4.6471 40 1 4.7147 2.9984 -5.0821 41 1 5.6656 1.3869 -6.6251 42 1 7.2020 1.0129 -8.5111 43 1 9.8208 0.4706 -8.8945 44 1 11.2861 0.8445 -11.0347 45 1 10.9152 3.3818 -11.8378 46 1 9.7582 5.5478 -9.6128 47 1 7.1267 4.4232 -10.1027 48 1 8.5694 6.8712 -12.0380 49 1 10.4172 5.3741 -12.5519 50 1 9.3408 4.5630 -7.4614 51 1 7.7927 4.9346 -5.5844 52 1 5.9183 2.3268 0.8893 53 1 5.8385 3.8664 0.0000 54 1 3.6113 3.2362 0.8897 55 1 3.6110 3.2363 -0.8901 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14474850_13287746.mol2 55 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:51:58 Heat of formation + Delta-G solvation = -68.197750 kcal Electronic energy + Delta-G solvation = -37470.934696 eV Core-core repulsion = 32633.477275 eV Total energy + Delta-G solvation = -4837.457421 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 399.192 amu Computer time = 1.71 seconds Orbital eigenvalues (eV) -42.72164 -41.92443 -41.12772 -39.94788 -38.83466 -37.70762 -37.52335 -34.85083 -34.83089 -32.23501 -32.11763 -31.87089 -31.10146 -30.95077 -28.65088 -27.67610 -26.07450 -24.88396 -23.96412 -23.72594 -23.48847 -21.94298 -21.62834 -21.39956 -20.63893 -20.16587 -19.27283 -18.64682 -18.28181 -17.79876 -17.58372 -17.41782 -17.04205 -16.93517 -16.40205 -16.16452 -15.95837 -15.81258 -15.60040 -15.38216 -15.16497 -14.95164 -14.79447 -14.63483 -14.46386 -14.42086 -14.25221 -14.17818 -13.97322 -13.88192 -13.69807 -13.33333 -13.29468 -13.24150 -13.13377 -12.96491 -12.89613 -12.56771 -12.24129 -12.19024 -12.04905 -12.01885 -12.00124 -11.85014 -11.61465 -11.39236 -11.16230 -10.96818 -10.73406 -10.30166 -10.02876 -9.94062 -9.15126 -9.06649 -4.96132 0.01134 0.38700 1.07211 1.11050 1.36821 1.63526 1.68148 1.72909 1.86506 1.95345 2.09282 2.22442 2.76703 3.36319 3.47999 3.60326 3.64038 3.66775 3.69947 3.77626 3.90825 3.94750 4.05811 4.06368 4.12682 4.17126 4.22317 4.27285 4.28929 4.34710 4.36493 4.40812 4.41665 4.44135 4.48948 4.52513 4.61352 4.65551 4.65903 4.69474 4.80478 4.84843 4.98777 5.00234 5.07077 5.10418 5.15040 5.17851 5.22244 5.24049 5.27943 5.30171 5.36995 5.38300 5.53521 5.58477 5.81331 5.91446 6.16932 6.49046 6.57296 6.59718 6.66600 7.29955 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.365 6.365 3 C 0.462 3.538 4 O -0.537 6.537 5 C -0.076 4.076 6 H 0.129 0.871 7 C -0.101 4.101 8 C -0.123 4.123 9 C 0.142 3.858 10 H 0.074 0.926 11 N -0.715 5.715 12 C 0.515 3.485 13 O -0.576 6.576 14 C -0.101 4.101 15 C -0.064 4.064 16 C -0.096 4.096 17 C -0.121 4.121 18 C 0.113 3.887 19 N -0.393 5.393 20 C -0.017 4.017 21 C -0.199 4.199 22 C -0.205 4.205 23 C -0.019 4.019 24 C -0.051 4.051 25 O -0.545 6.545 26 Si 0.802 3.198 27 C -0.096 4.096 28 C -0.100 4.100 29 C -0.116 4.116 30 C -0.102 4.102 31 H 0.061 0.939 32 H 0.126 0.874 33 H 0.060 0.940 34 H 0.079 0.921 35 H 0.065 0.935 36 H 0.056 0.944 37 H 0.089 0.911 38 H 0.411 0.589 39 H 0.127 0.873 40 H 0.131 0.869 41 H 0.145 0.855 42 H 0.137 0.863 43 H 0.176 0.824 44 H 0.154 0.846 45 H 0.148 0.852 46 H 0.104 0.896 47 H 0.388 0.612 48 H -0.290 1.290 49 H -0.282 1.282 50 H 0.111 0.889 51 H 0.134 0.866 52 H 0.096 0.904 53 H 0.082 0.918 54 H 0.074 0.926 55 H 0.070 0.930 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.486 -2.057 1.628 6.081 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.281 6.281 3 C 0.307 3.693 4 O -0.427 6.427 5 C -0.094 4.094 6 H 0.146 0.854 7 C -0.138 4.138 8 C -0.162 4.162 9 C 0.038 3.962 10 H 0.092 0.908 11 N -0.369 5.369 12 C 0.302 3.698 13 O -0.455 6.455 14 C -0.141 4.141 15 C -0.064 4.064 16 C -0.114 4.114 17 C -0.140 4.140 18 C 0.024 3.976 19 N -0.066 5.066 20 C -0.145 4.145 21 C -0.223 4.223 22 C -0.229 4.229 23 C -0.129 4.129 24 C -0.160 4.160 25 O -0.351 6.351 26 Si 0.705 3.295 27 C -0.115 4.115 28 C -0.118 4.118 29 C -0.154 4.154 30 C -0.140 4.140 31 H 0.080 0.920 32 H 0.145 0.855 33 H 0.079 0.921 34 H 0.097 0.903 35 H 0.084 0.916 36 H 0.075 0.925 37 H 0.108 0.892 38 H 0.248 0.752 39 H 0.145 0.855 40 H 0.149 0.851 41 H 0.163 0.837 42 H 0.155 0.845 43 H 0.193 0.807 44 H 0.172 0.828 45 H 0.166 0.834 46 H 0.122 0.878 47 H 0.236 0.764 48 H -0.217 1.217 49 H -0.208 1.208 50 H 0.129 0.871 51 H 0.151 0.849 52 H 0.114 0.886 53 H 0.101 0.899 54 H 0.093 0.907 55 H 0.088 0.912 Dipole moment (debyes) X Y Z Total from point charges -4.597 -1.184 1.696 5.041 hybrid contribution 0.042 0.144 0.599 0.617 sum -4.554 -1.040 2.295 5.205 Atomic orbital electron populations 1.23506 0.75164 1.05499 1.02411 1.86513 1.24646 1.33347 1.83562 1.24357 0.92982 0.80963 0.71013 1.90671 1.68095 1.37286 1.46642 1.21232 0.85044 1.00028 1.03140 0.85372 1.21413 0.95681 1.01228 0.95496 1.21862 0.94881 0.96200 1.03224 1.20976 0.98699 0.92020 0.84531 0.90789 1.46110 1.26612 1.54950 1.09214 1.20897 0.83846 0.79852 0.85164 1.90745 1.24897 1.44305 1.85539 1.20772 0.99824 1.04155 0.89319 1.19522 0.96174 0.94860 0.95893 1.21061 0.99487 0.96985 0.93889 1.21113 0.93674 0.99685 0.99545 1.17761 0.92376 0.98000 0.89499 1.41546 1.34444 1.10629 1.19963 1.22314 1.00103 0.90796 1.01298 1.21176 1.04743 0.97549 0.98835 1.20955 1.03467 0.95967 1.02560 1.21223 1.04607 0.93566 0.93484 1.25006 0.85966 0.92053 1.12991 1.86490 1.17509 1.71056 1.60059 0.93029 0.82997 0.79065 0.74364 1.20828 0.99628 0.96769 0.94292 1.20981 0.94154 0.99856 0.96818 1.21792 0.94186 1.02195 0.97245 1.21424 0.95863 0.92977 1.03689 0.92005 0.85544 0.92122 0.90258 0.91590 0.92490 0.89228 0.75164 0.85549 0.85145 0.83682 0.84501 0.80672 0.82838 0.83416 0.87844 0.76362 1.21705 1.20818 0.87139 0.84853 0.88571 0.89892 0.90746 0.91160 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.07 10.56 113.37 1.20 1.13 16 2 O -0.36 -0.32 10.47 -51.35 -0.54 -0.86 16 3 C 0.46 0.64 7.26 71.24 0.52 1.16 16 4 O -0.54 -3.90 15.73 21.97 0.35 -3.56 16 5 C -0.08 0.37 2.63 -11.54 -0.03 0.33 16 6 H 0.13 -1.00 8.14 -2.39 -0.02 -1.02 16 7 C -0.10 0.52 4.98 30.59 0.15 0.67 16 8 C -0.12 0.51 5.60 30.59 0.17 0.68 16 9 C 0.14 -0.56 2.78 44.99 0.13 -0.43 16 10 H 0.07 0.05 7.58 -2.39 -0.02 0.03 16 11 N -0.72 3.32 4.23 -442.52 -1.87 1.45 16 12 C 0.51 0.14 7.79 87.66 0.68 0.82 16 13 O -0.58 -5.73 15.70 -3.06 -0.05 -5.78 16 14 C -0.10 0.50 5.83 29.10 0.17 0.67 16 15 C -0.06 -0.06 4.37 -19.85 -0.09 -0.15 16 16 C -0.10 -0.07 9.69 22.25 0.22 0.14 16 17 C -0.12 -0.31 9.66 22.38 0.22 -0.10 16 18 C 0.11 0.62 4.89 38.08 0.19 0.81 16 19 N -0.39 -2.41 2.87 -333.41 -0.96 -3.37 16 20 C -0.02 -0.09 11.12 83.18 0.92 0.83 16 21 C -0.20 -1.02 10.86 22.15 0.24 -0.77 16 22 C -0.21 -1.10 9.43 22.15 0.21 -0.89 16 23 C -0.02 -0.10 6.02 41.04 0.25 0.15 16 24 C -0.05 -0.12 2.28 71.23 0.16 0.04 16 25 O -0.54 -1.07 9.89 -148.98 -1.47 -2.54 16 26 Si 0.80 -0.32 31.31 68.60 2.15 1.82 16 27 C -0.10 -0.60 7.68 22.38 0.17 -0.42 16 28 C -0.10 -0.35 9.69 22.25 0.22 -0.14 16 29 C -0.12 0.89 5.61 30.59 0.17 1.06 16 30 C -0.10 0.60 4.32 30.59 0.13 0.73 16 31 H 0.06 -0.13 8.13 -2.39 -0.02 -0.15 16 32 H 0.13 -0.98 8.14 -2.39 -0.02 -1.00 16 33 H 0.06 -0.11 8.13 -2.38 -0.02 -0.13 16 34 H 0.08 -0.36 8.11 -2.39 -0.02 -0.38 16 35 H 0.07 -0.30 7.61 -2.39 -0.02 -0.31 16 36 H 0.06 0.03 8.14 -2.38 -0.02 0.01 16 37 H 0.09 -0.56 8.14 -2.39 -0.02 -0.58 16 38 H 0.41 -3.65 6.87 -92.71 -0.64 -4.28 16 39 H 0.13 -1.14 8.08 -2.39 -0.02 -1.16 16 40 H 0.13 -1.30 8.08 -2.39 -0.02 -1.32 16 41 H 0.15 -0.51 8.06 -2.91 -0.02 -0.53 16 42 H 0.14 0.01 8.06 -2.91 -0.02 -0.02 16 43 H 0.18 0.30 8.06 -2.91 -0.02 0.28 16 44 H 0.15 0.24 8.06 -2.91 -0.02 0.22 16 45 H 0.15 0.48 6.67 -2.91 -0.02 0.46 16 46 H 0.10 0.38 7.96 -2.39 -0.02 0.36 16 47 H 0.39 -1.38 8.70 -74.06 -0.64 -2.03 16 48 H -0.29 -1.58 7.11 99.48 0.71 -0.87 16 49 H -0.28 -1.16 6.78 99.48 0.67 -0.48 16 50 H 0.11 0.84 7.67 -2.91 -0.02 0.82 16 51 H 0.13 0.12 8.06 -2.91 -0.02 0.09 16 52 H 0.10 -0.91 8.14 -2.39 -0.02 -0.93 16 53 H 0.08 -0.64 8.14 -2.38 -0.02 -0.66 16 54 H 0.07 -0.31 8.10 -2.39 -0.02 -0.33 16 55 H 0.07 -0.39 6.46 -2.38 -0.02 -0.41 16 Total: 0.00 -24.08 444.44 3.23 -20.84 By element: Atomic # 1 Polarization: -13.96 SS G_CDS: -0.36 Total: -14.32 kcal Atomic # 6 Polarization: 0.32 SS G_CDS: 5.99 Total: 6.32 kcal Atomic # 7 Polarization: 0.91 SS G_CDS: -2.83 Total: -1.92 kcal Atomic # 8 Polarization: -11.03 SS G_CDS: -1.71 Total: -12.74 kcal Atomic # 14 Polarization: -0.32 SS G_CDS: 2.15 Total: 1.82 kcal Total: -24.08 3.23 -20.84 kcal The number of atoms in the molecule is 55 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14474850_13287746.mol2 55 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -47.353 kcal (2) G-P(sol) polarization free energy of solvation -24.078 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -71.431 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.233 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.845 kcal (6) G-S(sol) free energy of system = (1) + (5) -68.198 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.71 seconds