Wall clock time and date at job start Sun Mar 7 2021 00:52:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45199 * 1 3 3 C 1.34235 * 117.00135 * 2 1 4 4 O 1.20825 * 119.99921 * 0.02562 * 3 2 1 5 5 C 1.50695 * 120.00089 * 179.97438 * 3 2 1 6 6 H 1.09005 * 109.46884 * 60.00647 * 5 3 2 7 7 C 1.52994 * 109.47185 * 180.02562 * 5 3 2 8 8 C 1.52999 * 109.47388 * 180.02562 * 7 5 3 9 9 C 1.53004 * 109.47019 * 300.00459 * 8 7 5 10 10 H 1.09005 * 109.46917 * 179.97438 * 9 8 7 11 11 N 1.46491 * 109.46963 * 299.99513 * 9 8 7 12 12 C 1.34782 * 120.00007 * 205.00191 * 11 9 8 13 13 O 1.21587 * 119.99827 * 0.02562 * 12 11 9 14 14 C 1.47534 * 119.99909 * 180.02562 * 12 11 9 15 15 C 1.40139 * 120.19123 * 180.02562 * 14 12 11 16 16 O 1.35651 * 120.14721 * 0.04005 * 15 14 12 17 17 C 1.38713 * 119.70097 * 180.02562 * 15 14 12 18 18 C 1.50694 * 119.95561 * 179.97438 * 17 15 14 19 19 O 1.42892 * 109.47590 * 285.02081 * 18 17 15 20 20 Si 1.86305 * 109.46822 * 165.02345 * 18 17 15 21 21 C 1.38057 * 120.08153 * 0.02562 * 17 15 14 22 22 C 1.38548 * 120.39238 * 359.97438 * 21 17 15 23 23 C 1.50703 * 119.84890 * 179.97438 * 22 21 17 24 24 C 1.37782 * 120.30119 * 0.25063 * 22 21 17 25 25 C 1.52996 * 109.47225 * 59.99892 * 9 8 7 26 26 C 1.53003 * 109.47086 * 299.99649 * 25 9 8 27 27 H 1.08997 * 109.47234 * 299.99895 * 1 2 3 28 28 H 1.09006 * 109.47241 * 59.99139 * 1 2 3 29 29 H 1.09000 * 109.47293 * 179.97438 * 1 2 3 30 30 H 1.09005 * 109.47035 * 60.00306 * 7 5 3 31 31 H 1.08998 * 109.47364 * 300.00121 * 7 5 3 32 32 H 1.08997 * 109.47512 * 179.97438 * 8 7 5 33 33 H 1.09005 * 109.46834 * 60.00119 * 8 7 5 34 34 H 0.97006 * 120.00448 * 24.99961 * 11 9 8 35 35 H 0.96694 * 114.00205 * 269.97332 * 16 15 14 36 36 H 1.09001 * 109.47069 * 45.02649 * 18 17 15 37 37 H 0.96697 * 114.00866 * 180.02562 * 19 18 17 38 38 H 1.48499 * 110.00279 * 60.00002 * 20 18 17 39 39 H 1.48503 * 110.00031 * 181.32353 * 20 18 17 40 40 H 1.07999 * 119.80269 * 179.97438 * 21 17 15 41 41 H 1.09002 * 109.47152 * 89.99833 * 23 22 21 42 42 H 1.09001 * 109.46980 * 329.99933 * 23 22 21 43 43 H 1.09004 * 109.47113 * 209.99914 * 23 22 21 44 44 H 1.07996 * 120.04823 * 179.74170 * 24 22 21 45 45 H 1.08995 * 109.47485 * 59.99875 * 25 9 8 46 46 H 1.08998 * 109.47174 * 180.02562 * 25 9 8 47 47 H 1.08995 * 109.47143 * 300.00435 * 26 25 9 48 48 H 1.08998 * 109.47138 * 180.02562 * 26 25 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4034 2.2094 0.0005 5 6 3.5663 1.2749 0.0006 6 1 3.9564 0.7807 -0.8893 7 6 4.0001 2.7420 0.0011 8 6 5.5280 2.8221 0.0011 9 6 6.0752 2.1280 1.2500 10 1 7.1637 2.1847 1.2497 11 7 5.5515 2.7916 2.4464 12 6 6.2329 2.7240 3.6073 13 8 7.2824 2.1125 3.6614 14 6 5.7052 3.3918 4.8123 15 6 6.4106 3.3245 6.0214 16 8 7.5829 2.6453 6.0893 17 6 5.9048 3.9558 7.1483 18 6 6.6583 3.8866 8.4515 19 8 6.4971 2.5885 9.0267 20 14 5.9914 5.1723 9.6233 21 6 4.7115 4.6464 7.0776 22 6 4.0111 4.7153 5.8842 23 6 2.7094 5.4720 5.8210 24 6 4.4964 4.0903 4.7562 25 6 5.6414 0.6608 1.2494 26 6 4.1134 0.5807 1.2495 27 1 -0.3633 0.5138 0.8900 28 1 -0.3634 0.5140 -0.8899 29 1 -0.3634 -1.0276 -0.0005 30 1 3.6101 3.2359 0.8911 31 1 3.6108 3.2364 -0.8889 32 1 5.8371 3.8674 0.0010 33 1 5.9177 2.3284 -0.8892 34 1 4.7143 3.2798 2.4031 35 1 7.4840 1.7126 6.3244 36 1 7.7165 4.0746 8.2697 37 1 6.9561 2.4720 9.8698 38 1 4.5493 4.9271 9.8792 39 1 6.7474 5.1359 10.9010 40 1 4.3216 5.1359 7.9578 41 1 2.9055 6.5109 5.5559 42 1 2.2181 5.4316 6.7932 43 1 2.0629 5.0208 5.0682 44 1 3.9450 4.1431 3.8291 45 1 6.0310 0.1671 0.3592 46 1 6.0308 0.1665 2.1393 47 1 3.7238 1.0745 2.1397 48 1 3.8044 -0.4645 1.2495 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14474850_13422088.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:52:20 Heat of formation + Delta-G solvation = -171.985642 kcal Electronic energy + Delta-G solvation = -32148.798988 eV Core-core repulsion = 27749.338364 eV Total energy + Delta-G solvation = -4399.460623 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.165 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -41.99834 -41.52703 -40.41987 -38.82277 -37.96997 -37.64896 -37.39681 -34.87165 -33.26566 -32.99630 -32.01300 -31.07657 -28.66288 -27.63105 -26.74817 -25.51970 -24.51881 -23.84736 -22.03248 -21.76275 -21.57118 -20.21871 -19.41372 -18.64879 -18.58531 -18.34005 -17.79632 -17.67524 -17.29613 -16.67032 -16.41568 -16.32846 -16.03299 -15.58928 -15.35207 -15.17495 -15.05796 -14.77476 -14.69097 -14.58051 -14.25796 -14.08917 -13.92331 -13.81890 -13.71421 -13.39170 -13.26945 -13.20045 -13.06140 -12.99315 -12.56865 -12.45324 -12.34065 -12.07564 -11.82299 -11.81688 -11.70048 -11.60948 -11.47614 -11.16931 -10.72991 -10.45258 -10.14634 -9.96569 -9.47589 -5.02208 -0.27598 0.09581 1.17224 1.21103 1.52243 1.68091 1.80907 1.87962 2.14307 2.60748 3.20218 3.27932 3.39400 3.48617 3.56594 3.61064 3.62838 3.77116 3.88285 3.94764 4.06780 4.07768 4.11866 4.14330 4.19953 4.21463 4.28116 4.30473 4.32983 4.43950 4.51870 4.57071 4.59440 4.62697 4.66249 4.76389 4.89945 4.93106 4.94312 4.97645 5.00644 5.04434 5.12318 5.17744 5.23765 5.36199 5.38461 5.52014 5.61718 6.38575 6.50717 6.71554 6.80274 7.29374 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.358 6.358 3 C 0.463 3.537 4 O -0.506 6.506 5 C -0.080 4.080 6 H 0.113 0.887 7 C -0.106 4.106 8 C -0.127 4.127 9 C 0.144 3.856 10 H 0.095 0.905 11 N -0.723 5.723 12 C 0.561 3.439 13 O -0.517 6.517 14 C -0.165 4.165 15 C 0.190 3.810 16 O -0.473 6.473 17 C -0.104 4.104 18 C -0.072 4.072 19 O -0.537 6.537 20 Si 0.688 3.312 21 C -0.076 4.076 22 C -0.097 4.097 23 C -0.117 4.117 24 C -0.068 4.068 25 C -0.129 4.129 26 C -0.110 4.110 27 H 0.063 0.937 28 H 0.064 0.936 29 H 0.103 0.897 30 H 0.069 0.931 31 H 0.080 0.920 32 H 0.079 0.921 33 H 0.086 0.914 34 H 0.397 0.603 35 H 0.398 0.602 36 H 0.082 0.918 37 H 0.381 0.619 38 H -0.253 1.253 39 H -0.259 1.259 40 H 0.136 0.864 41 H 0.078 0.922 42 H 0.070 0.930 43 H 0.070 0.930 44 H 0.130 0.870 45 H 0.079 0.921 46 H 0.077 0.923 47 H 0.067 0.933 48 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.403 1.419 -0.810 2.906 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.274 6.274 3 C 0.306 3.694 4 O -0.393 6.393 5 C -0.100 4.100 6 H 0.131 0.869 7 C -0.143 4.143 8 C -0.165 4.165 9 C 0.040 3.960 10 H 0.113 0.887 11 N -0.378 5.378 12 C 0.349 3.651 13 O -0.393 6.393 14 C -0.168 4.168 15 C 0.143 3.857 16 O -0.284 6.284 17 C -0.105 4.105 18 C -0.181 4.181 19 O -0.345 6.345 20 Si 0.590 3.410 21 C -0.094 4.094 22 C -0.097 4.097 23 C -0.173 4.173 24 C -0.087 4.087 25 C -0.168 4.168 26 C -0.147 4.147 27 H 0.082 0.918 28 H 0.082 0.918 29 H 0.121 0.879 30 H 0.088 0.912 31 H 0.098 0.902 32 H 0.098 0.902 33 H 0.104 0.896 34 H 0.234 0.766 35 H 0.257 0.743 36 H 0.100 0.900 37 H 0.230 0.770 38 H -0.178 1.178 39 H -0.184 1.184 40 H 0.153 0.847 41 H 0.096 0.904 42 H 0.089 0.911 43 H 0.089 0.911 44 H 0.147 0.853 45 H 0.098 0.902 46 H 0.095 0.905 47 H 0.086 0.914 48 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges -2.345 1.848 -0.698 3.066 hybrid contribution -0.512 -1.228 0.590 1.455 sum -2.857 0.620 -0.108 2.926 Atomic orbital electron populations 1.23313 0.75990 1.03986 1.02668 1.86513 1.23676 1.33380 1.83844 1.23841 0.92069 0.81404 0.72094 1.90682 1.67227 1.36361 1.45055 1.21166 0.86882 0.99455 1.02448 0.86895 1.21458 0.95625 0.93417 1.03850 1.21871 0.94860 1.02097 0.97701 1.20997 0.99815 0.91593 0.83620 0.88653 1.46063 1.26427 1.55634 1.09640 1.18004 0.84080 0.80262 0.82803 1.90827 1.21986 1.41857 1.84635 1.20356 0.96929 1.04745 0.94791 1.18185 0.84727 0.92809 0.89980 1.84667 1.24967 1.26806 1.91962 1.19542 0.95786 1.01523 0.93666 1.24701 1.03285 0.92766 0.97379 1.86538 1.76773 1.30355 1.40801 0.94905 0.80066 0.86504 0.79565 1.21110 0.92962 0.97160 0.98147 1.19767 0.97782 0.99409 0.92721 1.20838 0.93129 1.00004 1.03377 1.21120 0.93925 0.95239 0.98388 1.21941 0.94740 0.96406 1.03683 1.21507 0.96229 1.01304 0.95698 0.91801 0.91755 0.87879 0.91249 0.90173 0.90205 0.89579 0.76615 0.74319 0.89972 0.77033 1.17842 1.18361 0.84680 0.90374 0.91096 0.91098 0.85262 0.90212 0.90481 0.91429 0.90200 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.38 10.47 -39.27 -0.41 -0.79 16 3 C 0.46 0.59 7.26 36.00 0.26 0.85 16 4 O -0.51 -1.95 15.73 -18.75 -0.29 -2.25 16 5 C -0.08 0.12 2.63 -91.77 -0.24 -0.12 16 6 H 0.11 -0.32 8.14 -51.93 -0.42 -0.74 16 7 C -0.11 0.21 4.32 -26.73 -0.12 0.09 16 8 C -0.13 0.35 5.61 -26.73 -0.15 0.20 16 9 C 0.14 -0.14 2.78 -67.94 -0.19 -0.33 16 10 H 0.10 0.06 7.58 -51.93 -0.39 -0.33 16 11 N -0.72 0.19 4.18 -54.85 -0.23 -0.04 16 12 C 0.56 1.59 7.73 -12.47 -0.10 1.49 16 13 O -0.52 -3.14 14.82 -16.59 -0.25 -3.39 16 14 C -0.16 -0.36 5.89 -104.84 -0.62 -0.98 16 15 C 0.19 0.58 6.69 -38.69 -0.26 0.32 16 16 O -0.47 -1.78 10.91 -40.53 -0.44 -2.22 16 17 C -0.10 -0.18 5.30 -104.52 -0.55 -0.74 16 18 C -0.07 -0.04 2.37 36.00 0.09 0.05 16 19 O -0.54 -0.58 12.86 -35.23 -0.45 -1.03 16 20 Si 0.69 -0.64 30.19 -169.99 -5.13 -5.77 16 21 C -0.08 -0.04 8.30 -39.53 -0.33 -0.36 16 22 C -0.10 0.02 5.87 -104.67 -0.61 -0.59 16 23 C -0.12 0.27 10.00 36.01 0.36 0.63 16 24 C -0.07 0.00 9.18 -39.20 -0.36 -0.36 16 25 C -0.13 0.16 5.60 -26.73 -0.15 0.01 16 26 C -0.11 0.16 4.98 -26.73 -0.13 0.02 16 27 H 0.06 -0.04 8.13 -51.93 -0.42 -0.47 16 28 H 0.06 -0.05 8.13 -51.93 -0.42 -0.47 16 29 H 0.10 -0.31 8.14 -51.93 -0.42 -0.73 16 30 H 0.07 -0.12 6.46 -51.93 -0.34 -0.45 16 31 H 0.08 -0.11 8.10 -51.93 -0.42 -0.53 16 32 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 33 H 0.09 -0.32 8.14 -51.93 -0.42 -0.74 16 34 H 0.40 -0.76 4.90 -40.82 -0.20 -0.96 16 35 H 0.40 0.55 9.06 45.56 0.41 0.96 16 36 H 0.08 0.01 7.83 -51.93 -0.41 -0.39 16 37 H 0.38 -1.03 8.74 45.56 0.40 -0.63 16 38 H -0.25 -0.34 6.74 56.52 0.38 0.04 16 39 H -0.26 -0.28 7.11 56.52 0.40 0.12 16 40 H 0.14 -0.13 4.87 -52.49 -0.26 -0.38 16 41 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 42 H 0.07 -0.18 8.08 -51.93 -0.42 -0.60 16 43 H 0.07 -0.20 8.08 -51.93 -0.42 -0.62 16 44 H 0.13 -0.32 6.40 -52.49 -0.34 -0.65 16 45 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 46 H 0.08 0.05 8.14 -51.93 -0.42 -0.37 16 47 H 0.07 -0.05 7.60 -51.93 -0.39 -0.44 16 48 H 0.08 -0.10 8.11 -51.93 -0.42 -0.52 16 LS Contribution 387.16 15.07 5.83 5.83 Total: 0.00 -9.66 387.16 -9.62 -19.29 By element: Atomic # 1 Polarization: -4.64 SS G_CDS: -6.21 Total: -10.86 kcal Atomic # 6 Polarization: 3.26 SS G_CDS: -2.03 Total: 1.23 kcal Atomic # 7 Polarization: 0.19 SS G_CDS: -0.23 Total: -0.04 kcal Atomic # 8 Polarization: -7.83 SS G_CDS: -1.85 Total: -9.68 kcal Atomic # 14 Polarization: -0.64 SS G_CDS: -5.13 Total: -5.77 kcal Total LS contribution 5.83 Total: 5.83 kcal Total: -9.66 -9.62 -19.29 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14474850_13422088.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -152.699 kcal (2) G-P(sol) polarization free energy of solvation -9.664 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -162.363 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.622 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.286 kcal (6) G-S(sol) free energy of system = (1) + (5) -171.986 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds