Wall clock time and date at job start Sun Mar 7 2021 00:52:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45203 * 1 3 3 C 1.34223 * 116.99730 * 2 1 4 4 O 1.20823 * 120.00401 * 0.02562 * 3 2 1 5 5 C 1.50702 * 119.99814 * 179.97438 * 3 2 1 6 6 H 1.09003 * 109.47096 * 60.00618 * 5 3 2 7 7 C 1.53002 * 109.47331 * 180.02562 * 5 3 2 8 8 C 1.52996 * 109.47659 * 180.02562 * 7 5 3 9 9 C 1.53002 * 109.46597 * 300.00091 * 8 7 5 10 10 H 1.09000 * 109.46950 * 179.97438 * 9 8 7 11 11 N 1.46500 * 109.47143 * 299.99900 * 9 8 7 12 12 C 1.34779 * 119.99861 * 205.00083 * 11 9 8 13 13 O 1.21621 * 119.99965 * 0.02562 * 12 11 9 14 14 C 1.47375 * 119.99981 * 179.97438 * 12 11 9 15 15 C 1.36413 * 127.19131 * 359.95848 * 14 12 11 16 16 O 1.33662 * 108.39838 * 179.76926 * 15 14 12 17 17 C 1.34218 * 110.90203 * 0.44877 * 16 15 14 18 18 C 1.50701 * 125.43313 * 179.81269 * 17 16 15 19 19 O 1.42905 * 109.46937 * 244.69472 * 18 17 16 20 20 Si 1.86299 * 109.47378 * 4.69247 * 18 17 16 21 21 C 1.34174 * 109.12823 * 359.54813 * 17 16 15 22 22 C 1.53008 * 109.47189 * 59.99957 * 9 8 7 23 23 C 1.52994 * 109.47600 * 300.00469 * 5 3 2 24 24 H 1.08999 * 109.47284 * 59.99937 * 1 2 3 25 25 H 1.09007 * 109.47008 * 179.97438 * 1 2 3 26 26 H 1.08990 * 109.47414 * 299.99502 * 1 2 3 27 27 H 1.08998 * 109.47113 * 59.99703 * 7 5 3 28 28 H 1.09004 * 109.46927 * 300.00345 * 7 5 3 29 29 H 1.08991 * 109.47329 * 180.02562 * 8 7 5 30 30 H 1.08999 * 109.47062 * 59.99204 * 8 7 5 31 31 H 0.96998 * 119.99929 * 25.00114 * 11 9 8 32 32 H 1.08002 * 125.80279 * 0.02562 * 15 14 12 33 33 H 1.09000 * 109.47120 * 124.69507 * 18 17 16 34 34 H 0.96691 * 114.00079 * 59.99815 * 19 18 17 35 35 H 1.48501 * 109.99913 * 58.68075 * 20 18 17 36 36 H 1.48491 * 110.00401 * 179.97438 * 20 18 17 37 37 H 1.07999 * 127.02830 * 180.26361 * 21 17 16 38 38 H 1.08994 * 109.46966 * 59.99787 * 22 9 8 39 39 H 1.09004 * 109.46926 * 179.97438 * 22 9 8 40 40 H 1.09003 * 109.47018 * 300.00197 * 23 5 3 41 41 H 1.09002 * 109.47039 * 59.99675 * 23 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 0.0006 6 1 3.9564 0.7807 -0.8892 7 6 4.0001 2.7421 0.0011 8 6 5.5280 2.8223 0.0011 9 6 6.0750 2.1282 1.2501 10 1 7.1636 2.1849 1.2498 11 7 5.5512 2.7918 2.4465 12 6 6.2325 2.7242 3.6074 13 8 7.2823 2.1126 3.6617 14 6 5.7058 3.3923 4.8109 15 6 4.5531 4.1141 4.9155 16 8 4.4383 4.5455 6.1753 17 6 5.4830 4.1437 6.9161 18 6 5.6872 4.4501 8.3774 19 8 6.8481 5.2685 8.5348 20 14 4.1969 5.3530 9.0368 21 6 6.3135 3.4208 6.1494 22 6 5.6412 0.6609 1.2495 23 6 4.1130 0.5815 1.2500 24 1 -0.3634 0.5138 -0.8900 25 1 -0.3633 -1.0277 -0.0005 26 1 -0.3634 0.5137 0.8899 27 1 3.6100 3.2360 0.8910 28 1 3.6107 3.2364 -0.8889 29 1 5.8370 3.8675 0.0019 30 1 5.9177 2.3284 -0.8891 31 1 4.7141 3.2799 2.4031 32 1 3.8502 4.3014 4.1171 33 1 5.8213 3.5194 8.9286 34 1 6.7986 6.1149 8.0700 35 1 2.9780 4.5256 8.8500 36 1 4.3855 5.6605 10.4772 37 1 7.2393 2.9550 6.4532 38 1 6.0310 0.1672 0.3593 39 1 6.0314 0.1664 2.1391 40 1 3.7229 1.0757 2.1398 41 1 3.8039 -0.4638 1.2501 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14474850_13456056.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:52:37 Heat of formation + Delta-G solvation = -138.804754 kcal Electronic energy + Delta-G solvation = -26047.588588 eV Core-core repulsion = 22088.868174 eV Total energy + Delta-G solvation = -3958.720414 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 310.134 amu Computer time = 0.82 seconds Orbital eigenvalues (eV) -43.73635 -41.90958 -40.90191 -38.95728 -38.00580 -37.52541 -35.01894 -33.96153 -32.18967 -31.87349 -30.98398 -28.61550 -26.73218 -25.44596 -24.46147 -23.72102 -22.33875 -21.83055 -21.23842 -20.19872 -19.38855 -18.63542 -17.88763 -17.81816 -17.57266 -17.42856 -17.40850 -16.66486 -16.36009 -16.17157 -15.71725 -15.47058 -15.07539 -14.87404 -14.73969 -14.29108 -14.26314 -14.04946 -13.89402 -13.68840 -13.63202 -13.26081 -13.14791 -12.93456 -12.83206 -12.23573 -12.20406 -12.06985 -11.85351 -11.62820 -11.41380 -11.22785 -11.16248 -10.96454 -10.63714 -10.15701 -9.80780 -4.99375 0.24433 0.81036 1.10930 1.16735 1.49799 1.72795 1.79718 1.92780 2.08565 2.25401 3.29069 3.46814 3.48006 3.58057 3.60783 3.68958 3.93067 3.98422 4.05448 4.14208 4.25399 4.26693 4.28321 4.33078 4.40274 4.40747 4.44053 4.49557 4.63689 4.68377 4.79190 4.86411 4.98031 5.05926 5.10058 5.11505 5.14031 5.25132 5.29807 5.37374 5.49938 5.81648 6.45721 6.62104 6.66358 7.14839 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.365 6.365 3 C 0.462 3.538 4 O -0.536 6.536 5 C -0.075 4.075 6 H 0.131 0.869 7 C -0.103 4.103 8 C -0.116 4.116 9 C 0.142 3.858 10 H 0.078 0.922 11 N -0.706 5.706 12 C 0.587 3.413 13 O -0.582 6.582 14 C -0.267 4.267 15 C 0.060 3.940 16 O -0.164 6.164 17 C -0.053 4.053 18 C -0.036 4.036 19 O -0.545 6.545 20 Si 0.797 3.203 21 C -0.151 4.151 22 C -0.125 4.125 23 C -0.102 4.102 24 H 0.061 0.939 25 H 0.125 0.875 26 H 0.061 0.939 27 H 0.070 0.930 28 H 0.079 0.921 29 H 0.087 0.913 30 H 0.101 0.899 31 H 0.410 0.590 32 H 0.256 0.744 33 H 0.130 0.870 34 H 0.400 0.600 35 H -0.290 1.290 36 H -0.283 1.283 37 H 0.145 0.855 38 H 0.096 0.904 39 H 0.052 0.948 40 H 0.061 0.939 41 H 0.078 0.922 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.965 2.422 -3.793 5.998 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.281 6.281 3 C 0.307 3.693 4 O -0.425 6.425 5 C -0.094 4.094 6 H 0.149 0.851 7 C -0.141 4.141 8 C -0.153 4.153 9 C 0.038 3.962 10 H 0.096 0.904 11 N -0.358 5.358 12 C 0.376 3.624 13 O -0.463 6.463 14 C -0.271 4.271 15 C -0.010 4.010 16 O -0.059 6.059 17 C -0.101 4.101 18 C -0.145 4.145 19 O -0.353 6.353 20 Si 0.701 3.299 21 C -0.171 4.171 22 C -0.163 4.163 23 C -0.140 4.140 24 H 0.080 0.920 25 H 0.143 0.857 26 H 0.079 0.921 27 H 0.089 0.911 28 H 0.097 0.903 29 H 0.105 0.895 30 H 0.119 0.881 31 H 0.247 0.753 32 H 0.272 0.728 33 H 0.147 0.853 34 H 0.251 0.749 35 H -0.217 1.217 36 H -0.210 1.210 37 H 0.162 0.838 38 H 0.114 0.886 39 H 0.071 0.929 40 H 0.080 0.920 41 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges -4.137 1.941 -2.722 5.319 hybrid contribution -0.043 -0.730 -0.133 0.743 sum -4.180 1.211 -2.856 5.205 Atomic orbital electron populations 1.23496 0.75192 1.05438 1.02438 1.86516 1.24626 1.33431 1.83564 1.24351 0.92975 0.80967 0.71042 1.90666 1.68060 1.37193 1.46600 1.21240 0.85056 1.00153 1.02966 0.85088 1.21449 0.95846 0.92858 1.03901 1.21811 0.94200 1.02395 0.96909 1.21084 0.99044 0.92019 0.84079 0.90354 1.45878 1.26227 1.54878 1.08842 1.17463 0.83201 0.78888 0.82828 1.90788 1.24937 1.44990 1.85591 1.21545 1.00233 1.09977 0.95390 1.25206 0.97114 0.93607 0.85102 1.83712 1.41253 1.60880 1.20063 1.22801 0.88507 1.02920 0.95886 1.24667 1.00446 1.00980 0.88391 1.86542 1.39263 1.34235 1.75257 0.93181 0.71582 0.86294 0.78889 1.22565 1.01289 1.01600 0.91631 1.21894 0.94929 0.96171 1.03350 1.21426 0.95699 1.01298 0.95579 0.91979 0.85694 0.92056 0.91148 0.90265 0.89487 0.88052 0.75260 0.72846 0.85255 0.74897 1.21652 1.20978 0.83758 0.88587 0.92909 0.91997 0.90306 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.07 10.56 113.37 1.20 1.13 16 2 O -0.37 -0.38 10.47 -51.35 -0.54 -0.92 16 3 C 0.46 0.53 7.26 71.24 0.52 1.05 16 4 O -0.54 -3.52 15.73 21.97 0.35 -3.17 16 5 C -0.08 0.38 2.63 -11.54 -0.03 0.35 16 6 H 0.13 -1.09 8.14 -2.39 -0.02 -1.11 16 7 C -0.10 0.69 4.32 30.59 0.13 0.82 16 8 C -0.12 0.95 5.61 30.59 0.17 1.12 16 9 C 0.14 -0.45 2.78 44.99 0.13 -0.32 16 10 H 0.08 0.09 7.58 -2.39 -0.02 0.07 16 11 N -0.71 1.70 4.22 -445.82 -1.88 -0.19 16 12 C 0.59 3.31 7.78 86.65 0.67 3.99 16 13 O -0.58 -8.78 16.65 -4.10 -0.07 -8.85 16 14 C -0.27 -0.80 6.31 -18.99 -0.12 -0.92 16 15 C 0.06 -0.26 11.61 67.39 0.78 0.52 16 16 O -0.16 0.27 8.90 4.35 0.04 0.31 16 17 C -0.05 -0.07 6.18 24.76 0.15 0.09 16 18 C -0.04 0.03 2.97 71.24 0.21 0.24 16 19 O -0.54 0.19 12.88 -148.98 -1.92 -1.73 16 20 Si 0.80 -2.35 32.09 68.60 2.20 -0.15 16 21 C -0.15 -0.85 10.90 23.65 0.26 -0.59 16 22 C -0.13 0.39 5.61 30.61 0.17 0.56 16 23 C -0.10 0.43 4.98 30.60 0.15 0.58 16 24 H 0.06 -0.12 8.13 -2.39 -0.02 -0.14 16 25 H 0.12 -0.91 8.14 -2.38 -0.02 -0.93 16 26 H 0.06 -0.12 8.13 -2.39 -0.02 -0.14 16 27 H 0.07 -0.48 6.46 -2.39 -0.02 -0.50 16 28 H 0.08 -0.43 8.10 -2.39 -0.02 -0.45 16 29 H 0.09 -0.77 8.14 -2.39 -0.02 -0.78 16 30 H 0.10 -1.06 8.14 -2.39 -0.02 -1.08 16 31 H 0.41 -3.28 5.84 -92.71 -0.54 -3.82 16 32 H 0.26 -3.65 7.47 -2.91 -0.02 -3.67 16 33 H 0.13 -0.09 7.96 -2.39 -0.02 -0.11 16 34 H 0.40 -3.48 8.70 -74.06 -0.64 -4.12 16 35 H -0.29 -0.90 7.11 99.48 0.71 -0.19 16 36 H -0.28 -0.85 7.11 99.48 0.71 -0.14 16 37 H 0.14 1.20 8.06 -2.91 -0.02 1.17 16 38 H 0.10 -0.59 8.14 -2.39 -0.02 -0.61 16 39 H 0.05 0.14 8.14 -2.39 -0.02 0.12 16 40 H 0.06 -0.18 7.60 -2.39 -0.02 -0.20 16 41 H 0.08 -0.28 8.11 -2.39 -0.02 -0.29 16 Total: 0.00 -25.51 345.65 2.49 -23.02 By element: Atomic # 1 Polarization: -16.86 SS G_CDS: -0.08 Total: -16.94 kcal Atomic # 6 Polarization: 4.22 SS G_CDS: 4.40 Total: 8.61 kcal Atomic # 7 Polarization: 1.70 SS G_CDS: -1.88 Total: -0.19 kcal Atomic # 8 Polarization: -12.22 SS G_CDS: -2.14 Total: -14.36 kcal Atomic # 14 Polarization: -2.35 SS G_CDS: 2.20 Total: -0.15 kcal Total: -25.51 2.49 -23.02 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14474850_13456056.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -115.783 kcal (2) G-P(sol) polarization free energy of solvation -25.514 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -141.297 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.493 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.022 kcal (6) G-S(sol) free energy of system = (1) + (5) -138.805 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.82 seconds