Wall clock time and date at job start Sun Mar 7 2021 00:53:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45206 * 1 3 3 C 1.34226 * 116.99997 * 2 1 4 4 O 1.20826 * 120.00041 * 0.02562 * 3 2 1 5 5 C 1.50699 * 119.99922 * 180.02562 * 3 2 1 6 6 H 1.09005 * 109.47305 * 59.99940 * 5 3 2 7 7 C 1.52998 * 109.47362 * 180.02562 * 5 3 2 8 8 C 1.52996 * 109.47292 * 180.02562 * 7 5 3 9 9 C 1.53001 * 109.47170 * 299.99645 * 8 7 5 10 10 H 1.08997 * 109.47257 * 179.97438 * 9 8 7 11 11 N 1.46494 * 109.47012 * 300.00128 * 9 8 7 12 12 C 1.34774 * 120.00035 * 204.99832 * 11 9 8 13 13 O 1.21283 * 120.00040 * 359.97438 * 12 11 9 14 14 C 1.50702 * 120.00384 * 180.02562 * 12 11 9 15 15 O 1.42894 * 109.47536 * 179.97438 * 14 12 11 16 16 C 1.35897 * 117.00168 * 179.97438 * 15 14 12 17 17 C 1.38708 * 120.05417 * 180.02562 * 16 15 14 18 18 N 1.48000 * 120.03292 * 359.95966 * 17 16 15 19 19 O 1.21804 * 120.00467 * 180.02562 * 18 17 16 20 20 O 1.21807 * 119.99748 * 0.02562 * 18 17 16 21 21 C 1.38166 * 119.94492 * 179.97438 * 17 16 15 22 22 C 1.38246 * 120.05710 * 359.97438 * 21 17 16 23 23 C 1.50699 * 119.94884 * 179.97438 * 22 21 17 24 24 O 1.42907 * 109.46603 * 65.00493 * 23 22 21 25 25 Si 1.86298 * 109.47032 * 184.99796 * 23 22 21 26 26 C 1.38295 * 120.10956 * 0.27243 * 22 21 17 27 27 C 1.38128 * 120.05137 * 359.45363 * 26 22 21 28 28 C 1.53003 * 109.47012 * 60.00147 * 9 8 7 29 29 C 1.53001 * 109.46760 * 300.00131 * 28 9 8 30 30 H 1.09000 * 109.46887 * 179.97438 * 1 2 3 31 31 H 1.09005 * 109.46336 * 299.99307 * 1 2 3 32 32 H 1.08997 * 109.47222 * 59.99083 * 1 2 3 33 33 H 1.08996 * 109.47524 * 59.99525 * 7 5 3 34 34 H 1.09008 * 109.46901 * 299.99928 * 7 5 3 35 35 H 1.09005 * 109.47057 * 179.97438 * 8 7 5 36 36 H 1.09004 * 109.47236 * 59.99872 * 8 7 5 37 37 H 0.97001 * 120.00093 * 25.00127 * 11 9 8 38 38 H 1.09005 * 109.47157 * 59.99508 * 14 12 11 39 39 H 1.09001 * 109.46707 * 300.00001 * 14 12 11 40 40 H 1.08006 * 119.97772 * 180.02562 * 21 17 16 41 41 H 1.08996 * 109.47117 * 305.00406 * 23 22 21 42 42 H 0.96697 * 114.00527 * 59.99993 * 24 23 22 43 43 H 1.48506 * 109.99834 * 58.68765 * 25 23 22 44 44 H 1.48502 * 110.00011 * 180.02562 * 25 23 22 45 45 H 1.07993 * 119.97443 * 179.72587 * 26 22 21 46 46 H 1.07997 * 120.02612 * 180.26833 * 27 26 22 47 47 H 1.09004 * 109.47055 * 59.99980 * 28 9 8 48 48 H 1.08996 * 109.47150 * 179.97438 * 28 9 8 49 49 H 1.08995 * 109.47097 * 299.99879 * 29 28 9 50 50 H 1.09005 * 109.46783 * 180.02562 * 29 28 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4034 2.2093 0.0005 5 6 3.5664 1.2748 -0.0006 6 1 3.9558 0.7808 -0.8908 7 6 4.0002 2.7420 0.0002 8 6 5.5281 2.8220 -0.0011 9 6 6.0762 2.1275 1.2472 10 1 7.1647 2.1841 1.2461 11 7 5.5534 2.7908 2.4443 12 6 6.2356 2.7227 3.6046 13 8 7.2821 2.1120 3.6579 14 6 5.6976 3.4045 4.8362 15 8 6.5924 3.1890 5.9293 16 6 6.2523 3.7420 7.1232 17 6 7.0756 3.5731 8.2266 18 7 8.3252 2.7894 8.1054 19 8 9.0476 2.6409 9.0749 20 8 8.6314 2.2928 7.0361 21 6 6.7280 4.1367 9.4393 22 6 5.5610 4.8691 9.5532 23 6 5.1839 5.4823 10.8771 24 8 6.1460 6.4776 11.2322 25 14 3.4999 6.2673 10.7408 26 6 4.7359 5.0348 8.4558 27 6 5.0819 4.4780 7.2400 28 6 5.6424 0.6603 1.2465 29 6 4.1145 0.5803 1.2477 30 1 -0.3633 -1.0277 -0.0005 31 1 -0.3632 0.5138 0.8901 32 1 -0.3633 0.5140 -0.8899 33 1 3.6109 3.2356 0.8906 34 1 3.6101 3.2367 -0.8894 35 1 5.8372 3.8673 -0.0010 36 1 5.9171 2.3285 -0.8918 37 1 4.7162 3.2789 2.4018 38 1 4.7188 2.9921 5.0815 39 1 5.6043 4.4740 4.6479 40 1 7.3689 4.0058 10.2987 41 1 5.1628 4.7076 11.6435 42 1 6.2187 7.2000 10.5935 43 1 2.4958 5.2488 10.3409 44 1 3.1166 6.8762 12.0398 45 1 3.8226 5.6036 8.5484 46 1 4.4394 4.6113 6.3822 47 1 6.0314 0.1668 0.3558 48 1 6.0332 0.1654 2.1355 49 1 3.7255 1.0738 2.1383 50 1 3.8054 -0.4650 1.2476 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14474850_4549638.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:53:49 Heat of formation + Delta-G solvation = -155.327877 kcal Electronic energy + Delta-G solvation = -37474.302025 eV Core-core repulsion = 32244.547301 eV Total energy + Delta-G solvation = -5229.754724 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 395.160 amu Computer time = 2.33 seconds Orbital eigenvalues (eV) -43.02694 -42.05133 -41.69597 -40.98074 -39.81317 -38.86180 -37.56679 -37.47227 -37.12415 -35.03771 -33.52520 -32.46646 -32.14451 -31.89685 -29.71144 -28.64536 -27.59185 -26.72774 -25.06715 -24.16693 -23.94115 -22.86519 -22.32952 -21.78808 -20.56754 -20.29815 -19.45544 -19.23563 -18.74456 -18.62509 -18.35345 -18.26434 -17.87685 -17.69053 -17.53713 -17.24992 -16.76319 -16.51877 -16.35364 -16.21518 -15.87446 -15.56148 -15.27701 -15.08475 -15.00193 -14.87540 -14.34673 -14.18140 -14.10216 -14.00553 -13.95941 -13.73864 -13.48785 -13.34926 -13.28862 -13.06757 -12.60522 -12.43672 -12.41291 -12.20323 -12.18101 -12.14690 -11.89884 -11.85490 -11.78700 -11.73855 -11.58059 -11.25698 -10.97617 -10.94196 -10.76013 -10.24213 -9.92644 -5.30949 -1.13986 -0.39162 0.37477 0.52653 1.00222 1.07621 1.09794 1.37067 1.40522 1.61077 1.75628 1.92227 2.19651 2.97700 3.01624 3.19535 3.25398 3.29929 3.35584 3.43644 3.48077 3.52687 3.56144 3.60740 3.69216 3.77759 3.84800 3.98498 4.08077 4.11042 4.13055 4.14918 4.15200 4.18728 4.21246 4.29971 4.41732 4.42026 4.50581 4.57110 4.66643 4.78907 4.83951 4.84502 4.91472 4.94998 5.02072 5.09517 5.28335 5.33254 5.43555 5.69795 6.23253 6.32443 6.64100 6.93334 7.01967 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.358 6.358 3 C 0.463 3.537 4 O -0.507 6.507 5 C -0.081 4.081 6 H 0.114 0.886 7 C -0.106 4.106 8 C -0.127 4.127 9 C 0.146 3.854 10 H 0.098 0.902 11 N -0.722 5.722 12 C 0.514 3.486 13 O -0.494 6.494 14 C 0.029 3.971 15 O -0.253 6.253 16 C 0.200 3.800 17 C -0.076 4.076 18 N 0.028 4.972 19 O -0.177 6.177 20 O -0.117 6.117 21 C 0.009 3.991 22 C -0.158 4.158 23 C -0.065 4.065 24 O -0.535 6.535 25 Si 0.690 3.310 26 C -0.023 4.023 27 C -0.210 4.210 28 C -0.131 4.131 29 C -0.109 4.109 30 H 0.103 0.897 31 H 0.063 0.937 32 H 0.064 0.936 33 H 0.070 0.930 34 H 0.080 0.920 35 H 0.080 0.920 36 H 0.087 0.913 37 H 0.400 0.600 38 H 0.100 0.900 39 H 0.102 0.898 40 H 0.164 0.836 41 H 0.121 0.879 42 H 0.381 0.619 43 H -0.254 1.254 44 H -0.248 1.248 45 H 0.149 0.851 46 H 0.157 0.843 47 H 0.081 0.919 48 H 0.079 0.921 49 H 0.066 0.934 50 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.049 4.225 -4.522 10.153 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.274 6.274 3 C 0.306 3.694 4 O -0.394 6.394 5 C -0.100 4.100 6 H 0.132 0.868 7 C -0.143 4.143 8 C -0.165 4.165 9 C 0.042 3.958 10 H 0.116 0.884 11 N -0.378 5.378 12 C 0.298 3.702 13 O -0.367 6.367 14 C -0.049 4.049 15 O -0.162 6.162 16 C 0.150 3.850 17 C -0.160 4.160 18 N 0.548 4.452 19 O -0.386 6.386 20 O -0.341 6.341 21 C -0.009 4.009 22 C -0.159 4.159 23 C -0.176 4.176 24 O -0.341 6.341 25 Si 0.590 3.410 26 C -0.041 4.041 27 C -0.229 4.229 28 C -0.170 4.170 29 C -0.147 4.147 30 H 0.122 0.878 31 H 0.082 0.918 32 H 0.083 0.917 33 H 0.088 0.912 34 H 0.098 0.902 35 H 0.099 0.901 36 H 0.106 0.894 37 H 0.236 0.764 38 H 0.118 0.882 39 H 0.120 0.880 40 H 0.181 0.819 41 H 0.138 0.862 42 H 0.229 0.771 43 H -0.179 1.179 44 H -0.173 1.173 45 H 0.166 0.834 46 H 0.174 0.826 47 H 0.100 0.900 48 H 0.097 0.903 49 H 0.085 0.915 50 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges -8.655 3.937 -3.607 10.169 hybrid contribution -0.352 -0.364 -0.007 0.506 sum -9.007 3.573 -3.614 10.342 Atomic orbital electron populations 1.23320 0.75930 1.04038 1.02663 1.86515 1.23718 1.33356 1.83799 1.23837 0.92069 0.81409 0.72097 1.90684 1.67242 1.36372 1.45101 1.21174 0.86895 0.99446 1.02507 0.86841 1.21459 0.95547 0.93425 1.03908 1.21873 0.94886 1.02092 0.97632 1.21045 0.99968 0.91654 0.83159 0.88423 1.45950 1.26491 1.56022 1.09339 1.19789 0.85149 0.81450 0.83832 1.90866 1.21671 1.40106 1.84011 1.22753 0.93920 1.02433 0.85832 1.86502 1.46154 1.68573 1.14955 1.18692 0.91584 0.89912 0.84769 1.20584 0.90554 1.09212 0.95652 1.43339 1.01415 0.99617 1.00788 1.94559 1.48745 1.65272 1.30017 1.94698 1.76768 1.47568 1.15094 1.20845 0.95366 0.89531 0.95208 1.20314 0.95675 1.02545 0.97404 1.25093 1.04118 0.94229 0.94143 1.86567 1.61071 1.35792 1.50628 0.94961 0.74008 0.85764 0.86227 1.21246 0.97750 0.93934 0.91164 1.21278 0.97266 1.03727 1.00597 1.21963 0.94769 0.96247 1.04013 1.21504 0.96153 1.01415 0.95616 0.87838 0.91817 0.91726 0.91180 0.90153 0.90149 0.89434 0.76435 0.88189 0.87994 0.81856 0.86208 0.77147 1.17863 1.17253 0.83403 0.82591 0.90003 0.90283 0.91517 0.90108 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.05 10.56 101.05 1.07 1.01 16 2 O -0.36 -0.05 10.47 -39.25 -0.41 -0.46 16 3 C 0.46 0.07 7.26 36.01 0.26 0.33 16 4 O -0.51 -1.40 15.73 -18.75 -0.29 -1.70 16 5 C -0.08 0.22 2.63 -91.77 -0.24 -0.02 16 6 H 0.11 -0.44 8.14 -51.93 -0.42 -0.86 16 7 C -0.11 0.37 4.32 -26.73 -0.12 0.26 16 8 C -0.13 0.55 5.61 -26.73 -0.15 0.40 16 9 C 0.15 -0.39 2.78 -67.93 -0.19 -0.58 16 10 H 0.10 -0.09 7.58 -51.93 -0.39 -0.48 16 11 N -0.72 2.26 4.23 -53.81 -0.23 2.03 16 12 C 0.51 -0.05 7.87 -10.99 -0.09 -0.13 16 13 O -0.49 -2.58 16.16 -14.35 -0.23 -2.82 16 14 C 0.03 -0.08 5.22 36.01 0.19 0.11 16 15 O -0.25 -0.48 7.68 -49.77 -0.38 -0.86 16 16 C 0.20 0.11 6.67 -39.22 -0.26 -0.15 16 17 C -0.08 -0.20 6.87 -79.81 -0.55 -0.75 16 18 N 0.03 0.18 4.45 34.03 0.15 0.33 16 19 O -0.18 -1.28 18.45 -29.46 -0.54 -1.82 16 20 O -0.12 -0.98 17.24 -36.49 -0.63 -1.61 16 21 C 0.01 0.00 9.19 -39.60 -0.36 -0.36 16 22 C -0.16 0.33 5.35 -104.60 -0.56 -0.23 16 23 C -0.07 0.16 2.80 36.01 0.10 0.26 16 24 O -0.54 0.87 12.83 -35.23 -0.45 0.41 16 25 Si 0.69 -2.55 29.80 -169.99 -5.06 -7.62 16 26 C -0.02 0.09 8.66 -39.60 -0.34 -0.25 16 27 C -0.21 0.71 9.04 -39.43 -0.36 0.36 16 28 C -0.13 0.33 5.60 -26.73 -0.15 0.18 16 29 C -0.11 0.31 4.98 -26.73 -0.13 0.18 16 30 H 0.10 -0.38 8.14 -51.93 -0.42 -0.81 16 31 H 0.06 -0.10 8.13 -51.93 -0.42 -0.52 16 32 H 0.06 -0.09 8.13 -51.93 -0.42 -0.52 16 33 H 0.07 -0.26 6.46 -51.93 -0.34 -0.59 16 34 H 0.08 -0.22 8.10 -51.92 -0.42 -0.64 16 35 H 0.08 -0.36 8.14 -51.93 -0.42 -0.78 16 36 H 0.09 -0.43 8.14 -51.93 -0.42 -0.85 16 37 H 0.40 -2.23 6.87 -40.82 -0.28 -2.51 16 38 H 0.10 -0.57 7.67 -51.93 -0.40 -0.97 16 39 H 0.10 -0.61 7.66 -51.93 -0.40 -1.01 16 40 H 0.16 0.08 7.61 -52.48 -0.40 -0.32 16 41 H 0.12 -0.24 7.96 -51.93 -0.41 -0.66 16 42 H 0.38 -2.16 8.70 45.56 0.40 -1.76 16 43 H -0.25 0.43 7.11 56.52 0.40 0.83 16 44 H -0.25 -0.02 7.11 56.52 0.40 0.38 16 45 H 0.15 -1.00 4.90 -52.49 -0.26 -1.26 16 46 H 0.16 -1.08 6.30 -52.49 -0.33 -1.41 16 47 H 0.08 -0.28 8.14 -51.93 -0.42 -0.70 16 48 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 49 H 0.07 -0.18 7.60 -51.93 -0.39 -0.58 16 50 H 0.08 -0.19 8.11 -51.93 -0.42 -0.61 16 LS Contribution 417.31 15.07 6.29 6.29 Total: 0.00 -13.97 417.31 -10.30 -24.27 By element: Atomic # 1 Polarization: -10.44 SS G_CDS: -6.63 Total: -17.06 kcal Atomic # 6 Polarization: 2.50 SS G_CDS: -1.88 Total: 0.62 kcal Atomic # 7 Polarization: 2.44 SS G_CDS: -0.08 Total: 2.36 kcal Atomic # 8 Polarization: -5.92 SS G_CDS: -2.95 Total: -8.86 kcal Atomic # 14 Polarization: -2.55 SS G_CDS: -5.06 Total: -7.62 kcal Total LS contribution 6.29 Total: 6.29 kcal Total: -13.97 -10.30 -24.27 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14474850_4549638.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -131.059 kcal (2) G-P(sol) polarization free energy of solvation -13.965 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -145.025 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.303 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.268 kcal (6) G-S(sol) free energy of system = (1) + (5) -155.328 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.33 seconds