Wall clock time and date at job start Sun Mar 7 2021 00:54:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45202 * 1 3 3 C 1.34230 * 116.99836 * 2 1 4 4 O 1.20833 * 119.99930 * 359.97438 * 3 2 1 5 5 C 1.50697 * 120.00262 * 180.27336 * 3 2 1 6 6 H 1.09000 * 109.47461 * 59.71633 * 5 3 2 7 7 C 1.52996 * 109.47491 * 179.72204 * 5 3 2 8 8 C 1.53003 * 109.47301 * 179.97438 * 7 5 3 9 9 C 1.52996 * 109.46915 * 299.99916 * 8 7 5 10 10 H 1.09007 * 109.47078 * 179.97438 * 9 8 7 11 11 N 1.46496 * 109.47117 * 299.99845 * 9 8 7 12 12 C 1.34779 * 119.99834 * 205.00141 * 11 9 8 13 13 O 1.21277 * 120.00306 * 0.02562 * 12 11 9 14 14 C 1.50700 * 119.99968 * 179.97438 * 12 11 9 15 15 O 1.42902 * 109.47083 * 179.97438 * 14 12 11 16 16 C 1.35915 * 116.99827 * 179.97438 * 15 14 12 17 17 C 1.38786 * 120.05893 * 179.72429 * 16 15 14 18 18 Br 1.89103 * 120.03659 * 0.02562 * 17 16 15 19 19 C 1.38242 * 119.92846 * 179.77218 * 17 16 15 20 20 C 1.38239 * 120.04382 * 0.48224 * 19 17 16 21 21 C 1.50705 * 119.94173 * 179.76748 * 20 19 17 22 22 O 1.42902 * 109.47078 * 245.02639 * 21 20 19 23 23 Si 1.86302 * 109.46816 * 5.02448 * 21 20 19 24 24 C 1.38280 * 120.12087 * 359.79352 * 20 19 17 25 25 C 1.38147 * 120.06860 * 359.95700 * 24 20 19 26 26 C 1.53003 * 109.47207 * 60.00200 * 9 8 7 27 27 C 1.53002 * 109.46796 * 299.72392 * 5 3 2 28 28 H 1.09001 * 109.46882 * 180.02562 * 1 2 3 29 29 H 1.08998 * 109.47630 * 300.00638 * 1 2 3 30 30 H 1.09004 * 109.46770 * 60.01042 * 1 2 3 31 31 H 1.09004 * 109.47066 * 299.99799 * 7 5 3 32 32 H 1.08994 * 109.47405 * 59.99969 * 7 5 3 33 33 H 1.09008 * 109.46785 * 59.99617 * 8 7 5 34 34 H 1.09001 * 109.47245 * 179.97438 * 8 7 5 35 35 H 0.96997 * 120.00405 * 25.00090 * 11 9 8 36 36 H 1.08995 * 109.47144 * 300.00150 * 14 12 11 37 37 H 1.09001 * 109.47002 * 59.99828 * 14 12 11 38 38 H 1.07999 * 119.97703 * 180.23521 * 19 17 16 39 39 H 1.08998 * 109.47224 * 125.02341 * 21 20 19 40 40 H 0.96703 * 113.99431 * 179.97438 * 22 21 20 41 41 H 1.48499 * 109.99940 * 178.67941 * 23 21 20 42 42 H 1.48503 * 110.00199 * 299.99930 * 23 21 20 43 43 H 1.08002 * 119.96521 * 179.97438 * 24 20 19 44 44 H 1.07999 * 120.02108 * 180.02562 * 25 24 20 45 45 H 1.08994 * 109.47116 * 59.99825 * 26 9 8 46 46 H 1.09004 * 109.47205 * 179.97438 * 26 9 8 47 47 H 1.09008 * 109.46845 * 299.99275 * 27 5 3 48 48 H 1.08993 * 109.47452 * 60.00035 * 27 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4032 2.2094 -0.0005 5 6 3.5663 1.2750 -0.0062 6 1 3.9525 0.7785 -0.8964 7 6 4.0000 2.7422 -0.0119 8 6 5.5279 2.8223 -0.0176 9 6 6.0794 2.1323 1.2316 10 1 7.1680 2.1890 1.2274 11 7 5.5599 2.7998 2.4278 12 6 6.2453 2.7359 3.5865 13 8 7.2924 2.1262 3.6389 14 6 5.7111 3.4230 4.8168 15 8 6.6089 3.2112 5.9083 16 6 6.2725 3.7693 7.1010 17 6 7.0959 3.5989 8.2051 18 35 8.6882 2.5903 8.0518 19 6 6.7536 4.1717 9.4158 20 6 5.5873 4.9051 9.5293 21 6 5.2137 5.5242 10.8516 22 8 4.0145 4.9189 11.3390 23 14 6.5902 5.2497 12.0767 24 6 4.7626 5.0714 8.4319 25 6 5.1026 4.5054 7.2184 26 6 5.6457 0.6651 1.2373 27 6 4.1183 0.5848 1.2427 28 1 -0.3633 -1.0277 0.0005 29 1 -0.3634 0.5139 0.8899 30 1 -0.3633 0.5137 -0.8901 31 1 3.6067 3.2339 -0.9017 32 1 3.6139 3.2387 0.8782 33 1 5.9145 2.3256 -0.9076 34 1 5.8369 3.8676 -0.0221 35 1 4.7226 3.2877 2.3859 36 1 5.6180 4.4918 4.6245 37 1 4.7328 3.0122 5.0665 38 1 7.3957 4.0428 10.2745 39 1 5.0529 6.5941 10.7194 40 1 3.7145 5.2692 12.1890 41 1 6.2479 5.8830 13.3755 42 1 6.8193 3.7947 12.2658 43 1 3.8517 5.6445 8.5235 44 1 4.4581 4.6360 6.3618 45 1 6.0323 0.1685 0.3474 46 1 6.0390 0.1733 2.1271 47 1 3.7321 1.0813 2.1329 48 1 3.8094 -0.4605 1.2467 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14474850_6201210.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 00:54:57 Heat of formation + Delta-G solvation = -152.960233 kcal Electronic energy + Delta-G solvation = -32866.479196 eV Core-core repulsion = 28128.025573 eV Total energy + Delta-G solvation = -4738.453623 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 428.076 amu Computer time = 3.96 seconds Orbital eigenvalues (eV) -41.97997 -41.61365 -40.87117 -39.43464 -38.69655 -37.53892 -37.38313 -34.95762 -33.54786 -32.31843 -31.93112 -31.75620 -30.39946 -29.32875 -28.48126 -26.34113 -24.91147 -24.06474 -23.71852 -22.49053 -21.99310 -21.70032 -20.24788 -19.50633 -18.74199 -18.60600 -18.47728 -17.81699 -17.52441 -17.50201 -17.22516 -16.92150 -16.51844 -16.20030 -16.01941 -15.70691 -15.32633 -15.15483 -14.91013 -14.86361 -14.51425 -14.28598 -14.21195 -14.03031 -13.94112 -13.87325 -13.73557 -13.61365 -13.27348 -13.17048 -12.93440 -12.52970 -12.33705 -12.20067 -12.14723 -12.05573 -11.92523 -11.85573 -11.76972 -11.62173 -11.40842 -11.21601 -11.17220 -10.96703 -10.50393 -10.13368 -10.00881 -9.31967 -4.96485 -0.03887 0.06928 0.61940 1.10728 1.26300 1.42216 1.48259 1.54614 1.73053 1.91362 2.35796 2.52618 3.31601 3.46745 3.49148 3.61080 3.67309 3.69376 3.78794 3.83081 3.97261 4.02124 4.02973 4.06214 4.08404 4.15070 4.26099 4.28097 4.31501 4.34978 4.39169 4.41170 4.43834 4.63801 4.65129 4.68462 4.78717 4.79971 4.97591 5.02419 5.06501 5.10753 5.14443 5.25846 5.29865 5.30203 5.37246 5.43567 5.50449 6.04533 6.44451 6.59378 6.66174 7.14533 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.365 6.365 3 C 0.462 3.538 4 O -0.537 6.537 5 C -0.076 4.076 6 H 0.130 0.870 7 C -0.103 4.103 8 C -0.115 4.115 9 C 0.144 3.856 10 H 0.078 0.922 11 N -0.706 5.706 12 C 0.515 3.485 13 O -0.562 6.562 14 C 0.030 3.970 15 O -0.301 6.301 16 C 0.150 3.850 17 C -0.140 4.140 18 Br -0.047 7.047 19 C -0.058 4.058 20 C -0.113 4.113 21 C -0.066 4.066 22 O -0.555 6.555 23 Si 0.733 3.267 24 C -0.034 4.034 25 C -0.196 4.196 26 C -0.126 4.126 27 C -0.102 4.102 28 H 0.125 0.875 29 H 0.061 0.939 30 H 0.061 0.939 31 H 0.076 0.924 32 H 0.071 0.929 33 H 0.099 0.901 34 H 0.087 0.913 35 H 0.414 0.586 36 H 0.129 0.871 37 H 0.122 0.878 38 H 0.143 0.857 39 H 0.109 0.891 40 H 0.397 0.603 41 H -0.278 1.278 42 H -0.302 1.302 43 H 0.158 0.842 44 H 0.173 0.827 45 H 0.093 0.907 46 H 0.054 0.946 47 H 0.064 0.936 48 H 0.078 0.922 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.676 4.546 -3.119 7.228 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.282 6.282 3 C 0.307 3.693 4 O -0.426 6.426 5 C -0.094 4.094 6 H 0.148 0.852 7 C -0.140 4.140 8 C -0.153 4.153 9 C 0.040 3.960 10 H 0.097 0.903 11 N -0.362 5.362 12 C 0.300 3.700 13 O -0.440 6.440 14 C -0.048 4.048 15 O -0.213 6.213 16 C 0.102 3.898 17 C -0.220 4.220 18 Br 0.038 6.962 19 C -0.077 4.077 20 C -0.115 4.115 21 C -0.176 4.176 22 O -0.365 6.365 23 Si 0.639 3.361 24 C -0.052 4.052 25 C -0.215 4.215 26 C -0.164 4.164 27 C -0.140 4.140 28 H 0.143 0.857 29 H 0.080 0.920 30 H 0.080 0.920 31 H 0.095 0.905 32 H 0.089 0.911 33 H 0.117 0.883 34 H 0.105 0.895 35 H 0.252 0.748 36 H 0.147 0.853 37 H 0.140 0.860 38 H 0.160 0.840 39 H 0.126 0.874 40 H 0.248 0.752 41 H -0.205 1.205 42 H -0.230 1.230 43 H 0.175 0.825 44 H 0.190 0.810 45 H 0.112 0.888 46 H 0.073 0.927 47 H 0.083 0.917 48 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges -3.096 3.223 -2.991 5.378 hybrid contribution -2.083 0.167 0.726 2.212 sum -5.179 3.390 -2.265 6.591 Atomic orbital electron populations 1.23499 0.75189 1.05457 1.02426 1.86518 1.24633 1.33435 1.83567 1.24372 0.93008 0.80946 0.71019 1.90671 1.68084 1.37229 1.46627 1.21242 0.84980 1.00183 1.03038 0.85230 1.21442 0.95896 0.92824 1.03857 1.21803 0.94100 1.02429 0.96955 1.21048 0.99060 0.91877 0.84042 0.90338 1.45886 1.26482 1.55008 1.08794 1.20364 0.84231 0.80356 0.85008 1.90782 1.24569 1.43504 1.85122 1.22853 0.94130 1.03760 0.84029 1.86242 1.48047 1.70598 1.16436 1.18780 0.93486 0.92872 0.84694 1.21083 0.97118 1.08324 0.95461 1.96755 1.29786 1.71000 1.98645 1.20900 0.96973 0.94532 0.95281 1.19336 0.95222 1.01193 0.95708 1.24666 0.95006 1.00100 0.97847 1.86539 1.40868 1.66556 1.42574 0.94396 0.84265 0.79603 0.77834 1.21235 0.98342 0.95268 0.90394 1.21598 0.96702 1.02028 1.01160 1.21880 0.94911 0.96229 1.03382 1.21415 0.95673 1.01297 0.95594 0.85656 0.92044 0.92019 0.90494 0.91061 0.88260 0.89474 0.74789 0.85301 0.85994 0.83965 0.87356 0.75235 1.20466 1.23033 0.82474 0.81019 0.88826 0.92718 0.91725 0.90356 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.07 10.56 113.37 1.20 1.13 16 2 O -0.37 -0.37 10.48 -51.41 -0.54 -0.91 16 3 C 0.46 0.52 7.25 71.23 0.52 1.03 16 4 O -0.54 -3.61 15.73 21.94 0.35 -3.26 16 5 C -0.08 0.40 2.63 -11.54 -0.03 0.37 16 6 H 0.13 -1.08 8.14 -2.39 -0.02 -1.10 16 7 C -0.10 0.71 4.32 30.59 0.13 0.84 16 8 C -0.12 1.01 5.61 30.59 0.17 1.18 16 9 C 0.14 -0.62 2.78 44.99 0.13 -0.50 16 10 H 0.08 0.00 7.58 -2.38 -0.02 -0.01 16 11 N -0.71 3.47 4.23 -442.53 -1.87 1.60 16 12 C 0.51 0.91 7.87 87.66 0.69 1.60 16 13 O -0.56 -7.21 16.16 16.02 0.26 -6.95 16 14 C 0.03 -0.10 5.22 71.24 0.37 0.27 16 15 O -0.30 -1.74 9.00 -73.55 -0.66 -2.40 16 16 C 0.15 0.61 6.68 22.52 0.15 0.76 16 17 C -0.14 -0.95 6.24 22.40 0.14 -0.81 16 18 Br -0.05 -0.45 33.16 -20.37 -0.68 -1.13 16 19 C -0.06 -0.22 8.40 22.27 0.19 -0.03 16 20 C -0.11 -0.10 5.38 -19.85 -0.11 -0.20 16 21 C -0.07 0.16 2.79 71.24 0.20 0.36 16 22 O -0.56 0.11 12.81 -148.98 -1.91 -1.80 16 23 Si 0.73 -0.86 29.85 68.60 2.05 1.19 16 24 C -0.03 0.07 9.68 22.26 0.22 0.28 16 25 C -0.20 0.45 9.04 22.36 0.20 0.66 16 26 C -0.13 0.49 5.60 30.58 0.17 0.66 16 27 C -0.10 0.50 4.98 30.58 0.15 0.65 16 28 H 0.13 -0.92 8.14 -2.39 -0.02 -0.94 16 29 H 0.06 -0.12 8.13 -2.39 -0.02 -0.14 16 30 H 0.06 -0.11 8.13 -2.38 -0.02 -0.13 16 31 H 0.08 -0.41 8.10 -2.38 -0.02 -0.43 16 32 H 0.07 -0.50 6.46 -2.39 -0.02 -0.51 16 33 H 0.10 -1.05 8.14 -2.38 -0.02 -1.07 16 34 H 0.09 -0.82 8.14 -2.39 -0.02 -0.84 16 35 H 0.41 -4.24 6.87 -92.71 -0.64 -4.88 16 36 H 0.13 -1.30 7.66 -2.39 -0.02 -1.32 16 37 H 0.12 -1.10 7.66 -2.39 -0.02 -1.12 16 38 H 0.14 0.35 4.86 -2.91 -0.01 0.33 16 39 H 0.11 -0.85 7.96 -2.39 -0.02 -0.87 16 40 H 0.40 -3.16 8.74 -74.05 -0.65 -3.81 16 41 H -0.28 -0.61 7.11 99.48 0.71 0.10 16 42 H -0.30 -2.20 7.05 99.48 0.70 -1.50 16 43 H 0.16 -1.00 8.06 -2.91 -0.02 -1.03 16 44 H 0.17 -1.68 6.30 -2.91 -0.02 -1.70 16 45 H 0.09 -0.60 8.14 -2.39 -0.02 -0.62 16 46 H 0.05 0.09 8.14 -2.38 -0.02 0.07 16 47 H 0.06 -0.28 7.60 -2.38 -0.02 -0.29 16 48 H 0.08 -0.31 8.12 -2.39 -0.02 -0.33 16 Total: 0.00 -28.81 411.69 1.24 -27.57 By element: Atomic # 1 Polarization: -21.92 SS G_CDS: -0.23 Total: -22.15 kcal Atomic # 6 Polarization: 3.77 SS G_CDS: 4.48 Total: 8.25 kcal Atomic # 7 Polarization: 3.47 SS G_CDS: -1.87 Total: 1.60 kcal Atomic # 8 Polarization: -12.82 SS G_CDS: -2.51 Total: -15.33 kcal Atomic # 14 Polarization: -0.86 SS G_CDS: 2.05 Total: 1.19 kcal Atomic # 35 Polarization: -0.45 SS G_CDS: -0.68 Total: -1.13 kcal Total: -28.81 1.24 -27.57 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14474850_6201210.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -125.394 kcal (2) G-P(sol) polarization free energy of solvation -28.811 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -154.205 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.245 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.566 kcal (6) G-S(sol) free energy of system = (1) + (5) -152.960 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 3.96 seconds