Wall clock time and date at job start Sun Mar 7 2021 01:24:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45199 * 1 3 3 C 1.34236 * 116.99913 * 2 1 4 4 O 1.20824 * 119.99875 * 0.02562 * 3 2 1 5 5 C 1.50699 * 119.99849 * 180.02562 * 3 2 1 6 6 C 1.52994 * 109.47152 * 180.02562 * 5 3 2 7 7 C 1.53004 * 109.47656 * 180.02562 * 6 5 3 8 8 H 1.09001 * 112.84349 * 316.19756 * 7 6 5 9 9 C 1.53952 * 113.66580 * 87.43628 * 7 6 5 10 10 C 1.53779 * 87.01923 * 139.93936 * 9 7 6 11 11 H 1.09001 * 113.61830 * 89.22393 * 10 9 7 12 12 N 1.46500 * 113.61589 * 220.05472 * 10 9 7 13 13 C 1.34783 * 119.99541 * 254.13703 * 12 10 9 14 14 O 1.21594 * 119.99975 * 359.97438 * 13 12 10 15 15 C 1.47576 * 119.99846 * 179.97438 * 13 12 10 16 16 C 1.40203 * 119.83181 * 359.97438 * 15 13 12 17 17 C 1.36228 * 120.37443 * 179.97438 * 16 15 13 18 18 C 1.39875 * 119.96230 * 0.02562 * 17 16 15 19 19 C 1.46260 * 133.83975 * 179.68240 * 18 17 16 20 20 C 1.50703 * 126.48340 * 359.97438 * 19 18 17 21 21 O 1.42904 * 109.46947 * 74.99799 * 20 19 18 22 22 Si 1.86292 * 109.47480 * 194.99967 * 20 19 18 23 23 C 1.34458 * 107.03434 * 179.88575 * 19 18 17 24 24 N 1.36565 * 109.98278 * 0.41282 * 23 19 18 25 25 C 1.37823 * 109.86284 * 359.72723 * 24 23 19 26 26 C 1.38646 * 133.38354 * 180.02562 * 25 24 23 27 27 C 1.53771 * 113.61755 * 185.00017 * 7 6 5 28 28 H 1.08996 * 109.46786 * 299.99530 * 1 2 3 29 29 H 1.09001 * 109.47054 * 59.99980 * 1 2 3 30 30 H 1.09004 * 109.46932 * 180.02562 * 1 2 3 31 31 H 1.09002 * 109.47298 * 59.99928 * 5 3 2 32 32 H 1.09007 * 109.47123 * 300.00213 * 5 3 2 33 33 H 1.09002 * 109.47215 * 59.99709 * 6 5 3 34 34 H 1.09007 * 109.47143 * 300.00032 * 6 5 3 35 35 H 1.08993 * 113.61625 * 25.41817 * 9 7 6 36 36 H 1.08999 * 113.66521 * 254.46258 * 9 7 6 37 37 H 0.96999 * 120.00537 * 74.12541 * 12 10 9 38 38 H 1.07998 * 119.81020 * 359.97438 * 16 15 13 39 39 H 1.08004 * 120.02012 * 180.02562 * 17 16 15 40 40 H 1.09003 * 109.47019 * 315.00295 * 20 19 18 41 41 H 0.96701 * 113.99996 * 60.00210 * 21 20 19 42 42 H 1.48506 * 109.99689 * 58.67952 * 22 20 19 43 43 H 1.48492 * 110.00105 * 180.02562 * 22 20 19 44 44 H 1.07999 * 125.00177 * 180.14259 * 23 19 18 45 45 H 0.96999 * 125.06321 * 179.73593 * 24 23 19 46 46 H 1.07997 * 120.16745 * 0.02562 * 26 25 24 47 47 H 1.09004 * 113.61562 * 105.46710 * 27 7 6 48 48 H 1.09001 * 113.69324 * 334.57907 * 27 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1961 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 -0.0006 6 6 4.0001 2.7421 0.0002 7 6 5.5281 2.8223 -0.0011 8 1 5.9892 2.1199 0.6933 9 6 6.1473 2.7927 -1.4102 10 6 7.1377 3.8575 -0.9100 11 1 8.0405 3.4393 -0.4649 12 7 7.4211 4.9042 -1.8949 13 6 8.6041 4.9194 -2.5407 14 8 9.4362 4.0645 -2.3053 15 6 8.8895 5.9734 -3.5333 16 6 7.9273 6.9571 -3.8023 17 6 8.1793 7.9355 -4.7160 18 6 9.4037 7.9616 -5.3919 19 6 9.9811 8.8404 -6.4086 20 6 9.3235 10.0462 -7.0288 21 8 9.3319 11.1270 -6.0939 22 14 10.2583 10.5438 -8.5615 23 6 11.2103 8.3701 -6.6836 24 7 11.4630 7.2574 -5.9332 25 6 10.3783 6.9779 -5.1302 26 6 10.1136 5.9859 -4.1984 27 6 6.0698 4.2561 0.1224 28 1 -0.3633 0.5137 0.8900 29 1 -0.3633 0.5138 -0.8900 30 1 -0.3633 -1.0277 0.0005 31 1 3.9557 0.7810 -0.8908 32 1 3.9564 0.7806 0.8892 33 1 3.6107 3.2356 0.8906 34 1 3.6100 3.2368 -0.8894 35 1 5.4760 3.1528 -2.1898 36 1 6.6181 1.8423 -1.6614 37 1 6.7574 5.5863 -2.0825 38 1 6.9810 6.9390 -3.2821 39 1 7.4342 8.6907 -4.9185 40 1 8.2945 9.8030 -7.2937 41 1 10.2169 11.3974 -5.8132 42 1 10.2842 9.4172 -9.5287 43 1 9.6202 11.7323 -9.1823 44 1 11.8950 8.8054 -7.3965 45 1 12.2836 6.7410 -5.9611 46 1 10.8529 5.2271 -3.9888 47 1 6.4781 4.4853 1.1067 48 1 5.3781 5.0181 -0.2368 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14475074_12335838.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:24:06 Heat of formation + Delta-G solvation = -73.580562 kcal Electronic energy + Delta-G solvation = -30314.394859 eV Core-core repulsion = 25916.005400 eV Total energy + Delta-G solvation = -4398.389459 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.161 amu Computer time = 1.21 seconds Orbital eigenvalues (eV) -42.47258 -41.50162 -41.08224 -39.61693 -37.85416 -37.52663 -37.40386 -35.15951 -33.37211 -33.22653 -30.70961 -30.57862 -29.07617 -27.02358 -26.72266 -26.46628 -24.89535 -23.61153 -22.90210 -21.58343 -21.34416 -20.87150 -20.60451 -19.35850 -18.54100 -18.27025 -17.69363 -17.62063 -17.47456 -17.17515 -16.94786 -16.33707 -16.20566 -15.91887 -15.69650 -15.55851 -15.39144 -15.07878 -14.83032 -14.72071 -14.57014 -14.30305 -14.07665 -14.00829 -13.89272 -13.52290 -13.37990 -13.14514 -13.03351 -12.74856 -12.59717 -12.35613 -12.30667 -12.21973 -11.99624 -11.91141 -11.75566 -11.67245 -11.35913 -11.26241 -10.82711 -10.74139 -10.35245 -9.99725 -9.34012 -8.80293 -5.10373 -0.24542 0.41049 1.24795 1.28658 1.37765 1.62045 1.75171 1.90582 1.97062 2.03469 2.29208 2.94969 3.41704 3.43886 3.55116 3.59372 3.67046 3.74256 3.76826 3.77454 3.82014 3.88074 4.05507 4.12103 4.13961 4.17854 4.26219 4.32580 4.40697 4.43255 4.49447 4.50604 4.56351 4.61006 4.64455 4.66959 4.75017 4.76493 4.83502 4.98158 4.99749 5.04786 5.13568 5.25048 5.32268 5.44919 5.45163 5.47429 5.60840 5.62057 5.99850 6.36948 6.54330 6.65230 6.77813 7.27806 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.362 6.362 3 C 0.458 3.542 4 O -0.508 6.508 5 C -0.114 4.114 6 C -0.097 4.097 7 C -0.108 4.108 8 H 0.099 0.901 9 C -0.150 4.150 10 C 0.122 3.878 11 H 0.116 0.884 12 N -0.716 5.716 13 C 0.564 3.436 14 O -0.539 6.539 15 C -0.122 4.122 16 C -0.113 4.113 17 C -0.073 4.073 18 C -0.064 4.064 19 C -0.211 4.211 20 C -0.030 4.030 21 O -0.542 6.542 22 Si 0.685 3.315 23 C 0.077 3.923 24 N -0.584 5.584 25 C 0.081 3.919 26 C -0.056 4.056 27 C -0.141 4.141 28 H 0.063 0.937 29 H 0.063 0.937 30 H 0.102 0.898 31 H 0.107 0.893 32 H 0.107 0.893 33 H 0.076 0.924 34 H 0.074 0.926 35 H 0.087 0.913 36 H 0.075 0.925 37 H 0.401 0.599 38 H 0.125 0.875 39 H 0.130 0.870 40 H 0.111 0.889 41 H 0.377 0.623 42 H -0.256 1.256 43 H -0.254 1.254 44 H 0.179 0.821 45 H 0.422 0.578 46 H 0.136 0.864 47 H 0.078 0.922 48 H 0.089 0.911 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.515 0.376 -0.719 2.642 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.279 6.279 3 C 0.301 3.699 4 O -0.395 6.395 5 C -0.151 4.151 6 C -0.134 4.134 7 C -0.127 4.127 8 H 0.117 0.883 9 C -0.189 4.189 10 C 0.018 3.982 11 H 0.134 0.866 12 N -0.367 5.367 13 C 0.352 3.648 14 O -0.417 6.417 15 C -0.127 4.127 16 C -0.133 4.133 17 C -0.091 4.091 18 C -0.069 4.069 19 C -0.219 4.219 20 C -0.141 4.141 21 O -0.347 6.347 22 Si 0.586 3.414 23 C -0.052 4.052 24 N -0.186 5.186 25 C -0.025 4.025 26 C -0.078 4.078 27 C -0.179 4.179 28 H 0.082 0.918 29 H 0.082 0.918 30 H 0.121 0.879 31 H 0.125 0.875 32 H 0.126 0.874 33 H 0.095 0.905 34 H 0.093 0.907 35 H 0.105 0.895 36 H 0.093 0.907 37 H 0.238 0.762 38 H 0.143 0.857 39 H 0.148 0.852 40 H 0.129 0.871 41 H 0.224 0.776 42 H -0.181 1.181 43 H -0.179 1.179 44 H 0.196 0.804 45 H 0.260 0.740 46 H 0.154 0.846 47 H 0.097 0.903 48 H 0.107 0.893 Dipole moment (debyes) X Y Z Total from point charges 2.317 0.063 -1.514 2.769 hybrid contribution -0.672 -0.280 0.115 0.737 sum 1.644 -0.217 -1.399 2.170 Atomic orbital electron populations 1.23299 0.76004 1.03936 1.02671 1.86515 1.23751 1.33571 1.84020 1.23929 0.92429 0.81332 0.72195 1.90689 1.67372 1.36364 1.45124 1.21446 0.87162 1.00363 1.06146 1.21401 0.94252 0.93734 1.04043 1.22412 0.94716 0.97601 0.97967 0.88301 1.23628 0.98379 0.99994 0.96862 1.22535 0.97844 0.88555 0.89295 0.86569 1.45899 1.17581 1.31236 1.42011 1.18193 0.81660 0.84383 0.80518 1.90786 1.46546 1.39109 1.65273 1.19451 0.95410 0.97657 1.00141 1.20685 0.98686 0.94789 0.99151 1.20204 0.95445 0.98193 0.95308 1.19176 0.94320 0.95234 0.98136 1.20736 0.95732 1.01559 1.03878 1.24338 1.04449 0.84854 1.00491 1.86507 1.33744 1.50450 1.64005 0.95274 0.88522 0.81109 0.76486 1.21748 0.97225 0.89067 0.97139 1.41717 1.16026 1.25650 1.35228 1.18078 0.88893 0.98428 0.97109 1.20077 0.96888 0.96760 0.94033 1.23394 0.97549 0.97200 0.99740 0.91782 0.91796 0.87914 0.87472 0.87444 0.90548 0.90711 0.89490 0.90672 0.76241 0.85669 0.85229 0.87145 0.77582 1.18092 1.17878 0.80435 0.74003 0.84621 0.90327 0.89277 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.56 101.05 1.07 1.05 16 2 O -0.36 -0.56 10.57 -39.27 -0.41 -0.98 16 3 C 0.46 0.77 7.96 36.00 0.29 1.06 16 4 O -0.51 -2.37 15.73 -18.75 -0.29 -2.66 16 5 C -0.11 0.19 5.80 -27.89 -0.16 0.03 16 6 C -0.10 0.15 4.34 -26.73 -0.12 0.03 16 7 C -0.11 0.26 3.65 -89.72 -0.33 -0.07 16 8 H 0.10 -0.30 8.13 -51.93 -0.42 -0.72 16 9 C -0.15 0.20 7.45 -25.83 -0.19 0.01 16 10 C 0.12 -0.05 4.21 -67.12 -0.28 -0.33 16 11 H 0.12 0.13 7.50 -51.93 -0.39 -0.25 16 12 N -0.72 -0.08 5.31 -54.04 -0.29 -0.36 16 13 C 0.56 1.73 7.76 -12.45 -0.10 1.63 16 14 O -0.54 -3.50 15.93 5.28 0.08 -3.42 16 15 C -0.12 -0.26 5.87 -104.95 -0.62 -0.88 16 16 C -0.11 -0.06 9.46 -39.57 -0.37 -0.44 16 17 C -0.07 -0.09 10.03 -39.69 -0.40 -0.49 16 18 C -0.06 -0.12 6.35 -105.04 -0.67 -0.79 16 19 C -0.21 -0.01 5.57 -102.73 -0.57 -0.58 16 20 C -0.03 0.01 3.06 36.01 0.11 0.12 16 21 O -0.54 -0.09 12.88 -35.23 -0.45 -0.55 16 22 Si 0.68 -1.33 30.76 -169.99 -5.23 -6.55 16 23 C 0.08 -0.16 10.43 -16.78 -0.17 -0.33 16 24 N -0.58 0.81 6.07 -10.68 -0.06 0.74 16 25 C 0.08 0.12 7.26 -84.00 -0.61 -0.49 16 26 C -0.06 -0.12 9.61 -39.03 -0.37 -0.50 16 27 C -0.14 0.30 7.39 -25.92 -0.19 0.11 16 28 H 0.06 -0.02 8.13 -51.93 -0.42 -0.44 16 29 H 0.06 -0.01 8.13 -51.93 -0.42 -0.44 16 30 H 0.10 -0.27 8.14 -51.93 -0.42 -0.70 16 31 H 0.11 -0.30 8.14 -51.93 -0.42 -0.73 16 32 H 0.11 -0.35 8.14 -51.93 -0.42 -0.77 16 33 H 0.08 -0.05 8.10 -51.93 -0.42 -0.47 16 34 H 0.07 -0.05 7.81 -51.93 -0.41 -0.45 16 35 H 0.09 -0.11 7.90 -51.93 -0.41 -0.53 16 36 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 37 H 0.40 -0.88 6.70 -40.82 -0.27 -1.15 16 38 H 0.13 -0.27 6.36 -52.49 -0.33 -0.61 16 39 H 0.13 0.03 8.06 -52.48 -0.42 -0.39 16 40 H 0.11 0.03 7.96 -51.93 -0.41 -0.38 16 41 H 0.38 -1.40 8.70 45.56 0.40 -1.01 16 42 H -0.26 -0.15 7.11 56.52 0.40 0.25 16 43 H -0.25 -0.42 7.11 56.52 0.40 -0.02 16 44 H 0.18 -1.03 6.35 -52.49 -0.33 -1.36 16 45 H 0.42 -1.75 8.96 -40.82 -0.37 -2.11 16 46 H 0.14 0.27 7.62 -52.49 -0.40 -0.13 16 47 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 48 H 0.09 -0.23 8.07 -51.93 -0.42 -0.65 16 LS Contribution 403.41 15.07 6.08 6.08 Total: 0.00 -11.65 403.41 -11.04 -22.69 By element: Atomic # 1 Polarization: -7.36 SS G_CDS: -6.77 Total: -14.13 kcal Atomic # 6 Polarization: 2.84 SS G_CDS: -3.69 Total: -0.86 kcal Atomic # 7 Polarization: 0.73 SS G_CDS: -0.35 Total: 0.38 kcal Atomic # 8 Polarization: -6.53 SS G_CDS: -1.08 Total: -7.60 kcal Atomic # 14 Polarization: -1.33 SS G_CDS: -5.23 Total: -6.55 kcal Total LS contribution 6.08 Total: 6.08 kcal Total: -11.65 -11.04 -22.69 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14475074_12335838.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -50.890 kcal (2) G-P(sol) polarization free energy of solvation -11.648 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -62.538 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.043 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.691 kcal (6) G-S(sol) free energy of system = (1) + (5) -73.581 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.21 seconds