Wall clock time and date at job start Sun Mar 7 2021 01:24:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45199 * 1 3 3 C 1.34236 * 116.99913 * 2 1 4 4 O 1.20824 * 119.99875 * 0.02562 * 3 2 1 5 5 C 1.50699 * 119.99849 * 180.02562 * 3 2 1 6 6 C 1.52994 * 109.47152 * 180.02562 * 5 3 2 7 7 C 1.53004 * 109.47656 * 180.02562 * 6 5 3 8 8 H 1.09001 * 112.84349 * 316.19756 * 7 6 5 9 9 C 1.53952 * 113.66580 * 87.43628 * 7 6 5 10 10 C 1.53779 * 87.01923 * 139.93936 * 9 7 6 11 11 H 1.09001 * 113.61830 * 89.22393 * 10 9 7 12 12 N 1.46500 * 113.61589 * 220.05472 * 10 9 7 13 13 C 1.34783 * 119.99541 * 254.13703 * 12 10 9 14 14 O 1.21594 * 119.99975 * 359.97438 * 13 12 10 15 15 C 1.47576 * 119.99846 * 179.97438 * 13 12 10 16 16 C 1.40203 * 119.83181 * 359.97438 * 15 13 12 17 17 C 1.36228 * 120.37443 * 179.97438 * 16 15 13 18 18 C 1.39875 * 119.96230 * 0.02562 * 17 16 15 19 19 C 1.46260 * 133.83975 * 179.68240 * 18 17 16 20 20 C 1.50703 * 126.48340 * 359.97438 * 19 18 17 21 21 O 1.42904 * 109.46947 * 74.99799 * 20 19 18 22 22 Si 1.86292 * 109.47480 * 194.99967 * 20 19 18 23 23 C 1.34458 * 107.03434 * 179.88575 * 19 18 17 24 24 N 1.36565 * 109.98278 * 0.41282 * 23 19 18 25 25 C 1.37823 * 109.86284 * 359.72723 * 24 23 19 26 26 C 1.38646 * 133.38354 * 180.02562 * 25 24 23 27 27 C 1.53771 * 113.61755 * 185.00017 * 7 6 5 28 28 H 1.08996 * 109.46786 * 299.99530 * 1 2 3 29 29 H 1.09001 * 109.47054 * 59.99980 * 1 2 3 30 30 H 1.09004 * 109.46932 * 180.02562 * 1 2 3 31 31 H 1.09002 * 109.47298 * 59.99928 * 5 3 2 32 32 H 1.09007 * 109.47123 * 300.00213 * 5 3 2 33 33 H 1.09002 * 109.47215 * 59.99709 * 6 5 3 34 34 H 1.09007 * 109.47143 * 300.00032 * 6 5 3 35 35 H 1.08993 * 113.61625 * 25.41817 * 9 7 6 36 36 H 1.08999 * 113.66521 * 254.46258 * 9 7 6 37 37 H 0.96999 * 120.00537 * 74.12541 * 12 10 9 38 38 H 1.07998 * 119.81020 * 359.97438 * 16 15 13 39 39 H 1.08004 * 120.02012 * 180.02562 * 17 16 15 40 40 H 1.09003 * 109.47019 * 315.00295 * 20 19 18 41 41 H 0.96701 * 113.99996 * 60.00210 * 21 20 19 42 42 H 1.48506 * 109.99689 * 58.67952 * 22 20 19 43 43 H 1.48492 * 110.00105 * 180.02562 * 22 20 19 44 44 H 1.07999 * 125.00177 * 180.14259 * 23 19 18 45 45 H 0.96999 * 125.06321 * 179.73593 * 24 23 19 46 46 H 1.07997 * 120.16745 * 0.02562 * 26 25 24 47 47 H 1.09004 * 113.61562 * 105.46710 * 27 7 6 48 48 H 1.09001 * 113.69324 * 334.57907 * 27 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1961 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2749 -0.0006 6 6 4.0001 2.7421 0.0002 7 6 5.5281 2.8223 -0.0011 8 1 5.9892 2.1199 0.6933 9 6 6.1473 2.7927 -1.4102 10 6 7.1377 3.8575 -0.9100 11 1 8.0405 3.4393 -0.4649 12 7 7.4211 4.9042 -1.8949 13 6 8.6041 4.9194 -2.5407 14 8 9.4362 4.0645 -2.3053 15 6 8.8895 5.9734 -3.5333 16 6 7.9273 6.9571 -3.8023 17 6 8.1793 7.9355 -4.7160 18 6 9.4037 7.9616 -5.3919 19 6 9.9811 8.8404 -6.4086 20 6 9.3235 10.0462 -7.0288 21 8 9.3319 11.1270 -6.0939 22 14 10.2583 10.5438 -8.5615 23 6 11.2103 8.3701 -6.6836 24 7 11.4630 7.2574 -5.9332 25 6 10.3783 6.9779 -5.1302 26 6 10.1136 5.9859 -4.1984 27 6 6.0698 4.2561 0.1224 28 1 -0.3633 0.5137 0.8900 29 1 -0.3633 0.5138 -0.8900 30 1 -0.3633 -1.0277 0.0005 31 1 3.9557 0.7810 -0.8908 32 1 3.9564 0.7806 0.8892 33 1 3.6107 3.2356 0.8906 34 1 3.6100 3.2368 -0.8894 35 1 5.4760 3.1528 -2.1898 36 1 6.6181 1.8423 -1.6614 37 1 6.7574 5.5863 -2.0825 38 1 6.9810 6.9390 -3.2821 39 1 7.4342 8.6907 -4.9185 40 1 8.2945 9.8030 -7.2937 41 1 10.2169 11.3974 -5.8132 42 1 10.2842 9.4172 -9.5287 43 1 9.6202 11.7323 -9.1823 44 1 11.8950 8.8054 -7.3965 45 1 12.2836 6.7410 -5.9611 46 1 10.8529 5.2271 -3.9888 47 1 6.4781 4.4853 1.1067 48 1 5.3781 5.0181 -0.2368 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14475074_12335838.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:24:05 Heat of formation + Delta-G solvation = -74.639101 kcal Electronic energy + Delta-G solvation = -30314.440761 eV Core-core repulsion = 25916.005400 eV Total energy + Delta-G solvation = -4398.435360 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.161 amu Computer time = 1.29 seconds Orbital eigenvalues (eV) -42.45689 -41.58354 -41.17294 -39.65070 -37.86708 -37.63514 -37.42929 -35.23625 -33.38286 -33.21814 -30.72737 -30.59697 -29.06411 -26.98082 -26.63395 -26.40421 -24.91600 -23.65163 -22.90571 -21.63228 -21.41320 -20.83846 -20.52090 -19.35585 -18.62301 -18.27429 -17.70957 -17.66317 -17.51244 -17.22835 -16.95384 -16.31674 -16.19229 -15.99008 -15.70615 -15.54120 -15.36091 -15.07912 -14.90451 -14.75619 -14.58468 -14.31733 -14.13340 -14.01447 -13.82815 -13.39442 -13.36907 -13.11734 -13.00632 -12.71344 -12.62773 -12.31700 -12.28293 -12.24198 -11.93771 -11.90273 -11.82536 -11.69782 -11.39306 -11.19553 -11.01266 -10.78639 -10.29404 -10.08505 -9.36512 -8.78853 -4.97270 -0.32648 0.36108 1.14934 1.38896 1.42167 1.71643 1.77036 1.90259 1.95147 2.05783 2.29961 2.85635 3.50644 3.54088 3.61216 3.63497 3.72491 3.76058 3.84920 3.87593 3.90310 3.93078 4.11416 4.16470 4.24551 4.25562 4.30053 4.30557 4.49000 4.49665 4.56266 4.58552 4.64982 4.69385 4.70203 4.78053 4.79697 4.88810 4.95253 4.95924 5.07586 5.11401 5.20541 5.24504 5.34961 5.40545 5.42795 5.49314 5.61349 5.63814 5.97763 6.47917 6.55231 6.68801 6.90717 7.14005 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.369 6.369 3 C 0.455 3.545 4 O -0.545 6.545 5 C -0.110 4.110 6 C -0.091 4.091 7 C -0.096 4.096 8 H 0.111 0.889 9 C -0.147 4.147 10 C 0.112 3.888 11 H 0.099 0.901 12 N -0.703 5.703 13 C 0.562 3.438 14 O -0.583 6.583 15 C -0.139 4.139 16 C -0.108 4.108 17 C -0.087 4.087 18 C -0.082 4.082 19 C -0.236 4.236 20 C -0.040 4.040 21 O -0.562 6.562 22 Si 0.795 3.205 23 C 0.097 3.903 24 N -0.577 5.577 25 C 0.066 3.934 26 C -0.066 4.066 27 C -0.133 4.133 28 H 0.060 0.940 29 H 0.059 0.941 30 H 0.127 0.873 31 H 0.122 0.878 32 H 0.128 0.872 33 H 0.068 0.932 34 H 0.065 0.935 35 H 0.088 0.912 36 H 0.070 0.930 37 H 0.413 0.587 38 H 0.149 0.851 39 H 0.135 0.865 40 H 0.095 0.905 41 H 0.393 0.607 42 H -0.285 1.285 43 H -0.306 1.306 44 H 0.220 0.780 45 H 0.435 0.565 46 H 0.130 0.870 47 H 0.082 0.918 48 H 0.097 0.903 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.142 0.524 -0.991 3.336 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.285 6.285 3 C 0.301 3.699 4 O -0.435 6.435 5 C -0.147 4.147 6 C -0.129 4.129 7 C -0.114 4.114 8 H 0.129 0.871 9 C -0.185 4.185 10 C 0.008 3.992 11 H 0.117 0.883 12 N -0.354 5.354 13 C 0.351 3.649 14 O -0.464 6.464 15 C -0.143 4.143 16 C -0.128 4.128 17 C -0.106 4.106 18 C -0.088 4.088 19 C -0.243 4.243 20 C -0.149 4.149 21 O -0.370 6.370 22 Si 0.701 3.299 23 C -0.032 4.032 24 N -0.180 5.180 25 C -0.041 4.041 26 C -0.087 4.087 27 C -0.171 4.171 28 H 0.079 0.921 29 H 0.078 0.922 30 H 0.145 0.855 31 H 0.140 0.860 32 H 0.146 0.854 33 H 0.087 0.913 34 H 0.083 0.917 35 H 0.107 0.893 36 H 0.089 0.911 37 H 0.251 0.749 38 H 0.167 0.833 39 H 0.153 0.847 40 H 0.113 0.887 41 H 0.243 0.757 42 H -0.212 1.212 43 H -0.234 1.234 44 H 0.236 0.764 45 H 0.276 0.724 46 H 0.147 0.853 47 H 0.101 0.899 48 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges 2.938 0.193 -1.742 3.421 hybrid contribution -0.916 -0.300 0.169 0.979 sum 2.022 -0.107 -1.574 2.564 Atomic orbital electron populations 1.23489 0.75254 1.05486 1.02328 1.86519 1.24687 1.33577 1.83754 1.24600 0.93601 0.80801 0.70931 1.90670 1.68385 1.37419 1.47001 1.21565 0.84821 1.00530 1.07789 1.21322 0.94519 0.93804 1.03228 1.22343 0.94052 0.97677 0.97356 0.87136 1.23604 0.98007 0.99335 0.97600 1.22619 0.97726 0.89005 0.89876 0.88337 1.45856 1.16906 1.31391 1.41241 1.18399 0.81895 0.84056 0.80591 1.90753 1.48018 1.40820 1.66844 1.19503 0.96086 0.98157 1.00597 1.20882 0.99182 0.93876 0.98814 1.20390 0.95781 0.98669 0.95752 1.19583 0.94667 0.95827 0.98676 1.20861 0.96776 1.02169 1.04535 1.24556 1.04169 0.84772 1.01437 1.86462 1.35514 1.50633 1.64351 0.94058 0.86487 0.76429 0.72968 1.22369 0.96909 0.87766 0.96161 1.41814 1.15893 1.25834 1.34450 1.18118 0.89972 0.98348 0.97633 1.20144 0.97010 0.97009 0.94552 1.23378 0.96768 0.97648 0.99284 0.92116 0.92204 0.85467 0.85972 0.85388 0.91284 0.91674 0.89323 0.91146 0.74861 0.83295 0.84669 0.88704 0.75709 1.21168 1.23369 0.76376 0.72429 0.85258 0.89918 0.88471 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.56 113.37 1.20 1.18 16 2 O -0.37 -1.14 10.57 -51.47 -0.54 -1.68 16 3 C 0.46 1.63 7.96 71.24 0.57 2.20 16 4 O -0.54 -5.57 15.73 21.97 0.35 -5.23 16 5 C -0.11 0.45 5.80 29.85 0.17 0.62 16 6 C -0.09 0.31 4.34 30.59 0.13 0.44 16 7 C -0.10 0.51 3.65 -10.21 -0.04 0.47 16 8 H 0.11 -0.80 8.13 -2.39 -0.02 -0.82 16 9 C -0.15 0.38 7.45 31.18 0.23 0.61 16 10 C 0.11 -0.02 4.21 45.52 0.19 0.17 16 11 H 0.10 0.38 7.50 -2.39 -0.02 0.36 16 12 N -0.70 -0.70 5.31 -443.14 -2.35 -3.06 16 13 C 0.56 4.36 7.76 86.71 0.67 5.03 16 14 O -0.58 -8.95 15.93 -4.01 -0.06 -9.02 16 15 C -0.14 -0.80 5.87 -20.08 -0.12 -0.92 16 16 C -0.11 -0.20 9.46 22.28 0.21 0.01 16 17 C -0.09 -0.30 10.03 22.20 0.22 -0.08 16 18 C -0.08 -0.36 6.35 -20.14 -0.13 -0.48 16 19 C -0.24 0.06 5.57 -18.64 -0.10 -0.05 16 20 C -0.04 0.04 3.06 71.24 0.22 0.26 16 21 O -0.56 -0.18 12.88 -148.98 -1.92 -2.10 16 22 Si 0.80 -3.74 30.76 68.60 2.11 -1.63 16 23 C 0.10 -0.55 10.43 83.09 0.87 0.32 16 24 N -0.58 1.97 6.07 -187.71 -1.14 0.83 16 25 C 0.07 0.23 7.26 38.96 0.28 0.51 16 26 C -0.07 -0.40 9.61 22.63 0.22 -0.18 16 27 C -0.13 0.61 7.39 31.12 0.23 0.84 16 28 H 0.06 0.01 8.13 -2.39 -0.02 -0.01 16 29 H 0.06 0.01 8.13 -2.39 -0.02 0.00 16 30 H 0.13 -0.76 8.14 -2.39 -0.02 -0.78 16 31 H 0.12 -0.83 8.14 -2.39 -0.02 -0.85 16 32 H 0.13 -1.02 8.14 -2.38 -0.02 -1.04 16 33 H 0.07 -0.10 8.10 -2.39 -0.02 -0.12 16 34 H 0.06 -0.08 7.81 -2.38 -0.02 -0.09 16 35 H 0.09 -0.24 7.90 -2.39 -0.02 -0.26 16 36 H 0.07 -0.09 8.14 -2.39 -0.02 -0.11 16 37 H 0.41 -1.75 6.70 -92.71 -0.62 -2.37 16 38 H 0.15 -0.65 6.36 -2.91 -0.02 -0.67 16 39 H 0.14 0.20 8.06 -2.91 -0.02 0.17 16 40 H 0.10 0.15 7.96 -2.39 -0.02 0.13 16 41 H 0.39 -3.18 8.70 -74.06 -0.64 -3.83 16 42 H -0.28 -0.03 7.11 99.48 0.71 0.67 16 43 H -0.31 -1.19 7.11 99.48 0.71 -0.48 16 44 H 0.22 -3.24 6.35 -2.91 -0.02 -3.26 16 45 H 0.44 -3.98 8.96 -92.71 -0.83 -4.81 16 46 H 0.13 0.82 7.62 -2.91 -0.02 0.80 16 47 H 0.08 -0.40 8.14 -2.38 -0.02 -0.42 16 48 H 0.10 -0.58 8.07 -2.39 -0.02 -0.60 16 Total: 0.00 -29.75 403.41 0.43 -29.32 By element: Atomic # 1 Polarization: -17.36 SS G_CDS: -1.03 Total: -18.40 kcal Atomic # 6 Polarization: 5.93 SS G_CDS: 5.03 Total: 10.95 kcal Atomic # 7 Polarization: 1.27 SS G_CDS: -3.49 Total: -2.22 kcal Atomic # 8 Polarization: -15.84 SS G_CDS: -2.18 Total: -18.02 kcal Atomic # 14 Polarization: -3.74 SS G_CDS: 2.11 Total: -1.63 kcal Total: -29.75 0.43 -29.32 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14475074_12335838.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -45.324 kcal (2) G-P(sol) polarization free energy of solvation -29.746 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -75.070 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.431 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.315 kcal (6) G-S(sol) free energy of system = (1) + (5) -74.639 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.29 seconds