Wall clock time and date at job start Sun Mar 7 2021 01:24:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45198 * 1 3 3 C 1.34232 * 116.99855 * 2 1 4 4 O 1.20830 * 119.99809 * 0.02562 * 3 2 1 5 5 C 1.50701 * 119.99988 * 179.97438 * 3 2 1 6 6 C 1.52998 * 109.47024 * 180.02562 * 5 3 2 7 7 C 1.52997 * 109.47206 * 180.02562 * 6 5 3 8 8 H 1.08998 * 112.84809 * 316.19607 * 7 6 5 9 9 C 1.53789 * 113.69252 * 87.46426 * 7 6 5 10 10 C 1.53775 * 87.08084 * 139.99617 * 9 7 6 11 11 H 1.08994 * 113.69455 * 89.12764 * 10 9 7 12 12 N 1.46499 * 113.61244 * 220.02167 * 10 9 7 13 13 C 1.34781 * 120.00098 * 252.49590 * 12 10 9 14 14 O 1.21589 * 119.99673 * 0.02562 * 13 12 10 15 15 C 1.47528 * 120.00023 * 179.97438 * 13 12 10 16 16 C 1.40146 * 120.18966 * 180.02562 * 15 13 12 17 17 O 1.35651 * 120.14785 * 359.97438 * 16 15 13 18 18 C 1.42903 * 116.99763 * 180.02562 * 17 16 15 19 19 C 1.38704 * 119.69777 * 179.97438 * 16 15 13 20 20 C 1.38061 * 120.08805 * 359.71910 * 19 16 15 21 21 C 1.38544 * 120.38356 * 0.55684 * 20 19 16 22 22 C 1.50707 * 119.84445 * 179.72302 * 21 20 19 23 23 O 1.42903 * 109.46442 * 244.72533 * 22 21 20 24 24 Si 1.86293 * 109.47256 * 4.72100 * 22 21 20 25 25 C 1.37784 * 120.30397 * 359.44472 * 21 20 19 26 26 C 1.53780 * 113.61612 * 185.00110 * 7 6 5 27 27 H 1.08998 * 109.47191 * 299.99615 * 1 2 3 28 28 H 1.09003 * 109.47324 * 60.00004 * 1 2 3 29 29 H 1.08999 * 109.46773 * 180.02562 * 1 2 3 30 30 H 1.09001 * 109.46977 * 60.00159 * 5 3 2 31 31 H 1.09000 * 109.47130 * 299.99865 * 5 3 2 32 32 H 1.09001 * 109.47199 * 60.00191 * 6 5 3 33 33 H 1.09007 * 109.47343 * 300.00424 * 6 5 3 34 34 H 1.09000 * 113.61263 * 25.44133 * 9 7 6 35 35 H 1.09001 * 113.61232 * 254.54173 * 9 7 6 36 36 H 0.97007 * 120.00474 * 72.49227 * 12 10 9 37 37 H 1.08998 * 109.47022 * 60.00387 * 18 17 16 38 38 H 1.08998 * 109.46975 * 180.02562 * 18 17 16 39 39 H 1.09004 * 109.46988 * 300.00206 * 18 17 16 40 40 H 1.08004 * 119.95802 * 180.02562 * 19 16 15 41 41 H 1.08001 * 119.80599 * 180.30038 * 20 19 16 42 42 H 1.08999 * 109.47345 * 124.72604 * 22 21 20 43 43 H 0.96700 * 114.00311 * 60.00230 * 23 22 21 44 44 H 1.48506 * 109.99973 * 180.02562 * 24 22 21 45 45 H 1.48493 * 110.00375 * 301.32185 * 24 22 21 46 46 H 1.08000 * 120.04332 * 180.25289 * 25 21 20 47 47 H 1.08993 * 113.61514 * 105.38662 * 26 7 6 48 48 H 1.08996 * 113.61403 * 334.47687 * 26 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4032 2.2094 0.0005 5 6 3.5663 1.2749 0.0006 6 6 4.0000 2.7421 0.0011 7 6 5.5279 2.8223 0.0011 8 1 5.9886 2.1203 0.6960 9 6 6.1482 2.7930 -1.4059 10 6 7.1396 3.8566 -0.9053 11 1 8.0415 3.4387 -0.4581 12 7 7.4254 4.9023 -1.8907 13 6 8.6214 4.9349 -2.5113 14 8 9.4630 4.0960 -2.2536 15 6 8.9089 5.9877 -3.5039 16 6 10.1510 6.0250 -4.1520 17 8 11.0953 5.0932 -3.8690 18 6 12.3373 5.1951 -4.5685 19 6 10.4102 7.0191 -5.0839 20 6 9.4460 7.9634 -5.3751 21 6 8.2190 7.9332 -4.7324 22 6 7.1776 8.9737 -5.0551 23 8 6.9326 9.7767 -3.8987 24 14 7.7892 10.0547 -6.4435 25 6 7.9444 6.9529 -3.8039 26 6 6.0696 4.2563 0.1244 27 1 -0.3633 0.5138 0.8900 28 1 -0.3634 0.5138 -0.8900 29 1 -0.3633 -1.0277 0.0005 30 1 3.9564 0.7807 -0.8892 31 1 3.9557 0.7810 0.8908 32 1 3.6100 3.2360 0.8911 33 1 3.6106 3.2365 -0.8889 34 1 5.4779 3.1536 -2.1862 35 1 6.6179 1.8417 -1.6562 36 1 6.7538 5.5714 -2.0966 37 1 12.8001 6.1572 -4.3487 38 1 13.0007 4.3911 -4.2498 39 1 12.1581 5.1145 -5.6407 40 1 11.3658 7.0516 -5.5861 41 1 9.6510 8.7325 -6.1051 42 1 6.2536 8.4812 -5.3579 43 1 7.7130 10.2456 -3.5728 44 1 6.7714 11.0854 -6.7708 45 1 9.0653 10.7072 -6.0550 46 1 6.9851 6.9310 -3.3084 47 1 6.4758 4.4863 1.1093 48 1 5.3779 5.0169 -0.2376 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14475074_12496546.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:24:58 Heat of formation + Delta-G solvation = -137.754076 kcal Electronic energy + Delta-G solvation = -30370.274188 eV Core-core repulsion = 25972.297957 eV Total energy + Delta-G solvation = -4397.976231 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.165 amu Computer time = 2.20 seconds Orbital eigenvalues (eV) -41.78992 -41.42996 -40.68756 -39.25387 -39.12445 -37.49978 -37.25221 -35.08952 -33.55308 -32.33026 -31.84590 -29.11968 -28.60261 -27.00064 -26.67720 -26.23199 -25.23479 -23.41513 -22.31541 -21.56215 -21.32655 -20.66131 -19.43070 -18.53211 -18.44227 -18.09353 -17.61607 -17.46865 -17.27597 -16.84520 -16.82097 -16.28856 -16.17972 -15.97134 -15.86815 -15.78202 -15.26496 -14.89317 -14.58418 -14.56958 -14.42131 -14.07540 -13.86374 -13.62067 -13.52015 -13.49348 -13.26577 -13.16967 -13.02267 -12.70912 -12.45720 -12.33503 -12.25352 -12.10106 -11.96545 -11.74502 -11.71310 -11.63682 -11.33669 -11.23356 -10.86428 -10.51186 -10.22393 -9.89679 -9.29261 -5.03756 -0.24952 0.18734 1.20594 1.25947 1.50824 1.76453 1.87145 1.90327 2.20650 2.23636 2.72525 3.28849 3.44379 3.45736 3.51565 3.59318 3.64538 3.70872 3.78592 3.83688 3.95825 4.06870 4.08286 4.16147 4.18745 4.19522 4.19663 4.27070 4.33845 4.42821 4.49601 4.52599 4.56550 4.59997 4.63495 4.68128 4.70496 4.79138 4.84970 4.88862 5.00707 5.05951 5.08596 5.16379 5.22979 5.35348 5.46543 5.49298 5.63887 6.28714 6.33020 6.60310 6.78982 7.37847 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.362 6.362 3 C 0.458 3.542 4 O -0.508 6.508 5 C -0.114 4.114 6 C -0.097 4.097 7 C -0.108 4.108 8 H 0.098 0.902 9 C -0.149 4.149 10 C 0.124 3.876 11 H 0.117 0.883 12 N -0.721 5.721 13 C 0.562 3.438 14 O -0.517 6.517 15 C -0.175 4.175 16 C 0.193 3.807 17 O -0.279 6.279 18 C 0.019 3.981 19 C -0.214 4.214 20 C -0.049 4.049 21 C -0.167 4.167 22 C -0.069 4.069 23 O -0.530 6.530 24 Si 0.684 3.316 25 C -0.019 4.019 26 C -0.141 4.141 27 H 0.063 0.937 28 H 0.063 0.937 29 H 0.102 0.898 30 H 0.107 0.893 31 H 0.107 0.893 32 H 0.075 0.925 33 H 0.074 0.926 34 H 0.086 0.914 35 H 0.074 0.926 36 H 0.399 0.601 37 H 0.058 0.942 38 H 0.105 0.895 39 H 0.059 0.941 40 H 0.141 0.859 41 H 0.134 0.866 42 H 0.119 0.881 43 H 0.376 0.624 44 H -0.256 1.256 45 H -0.260 1.260 46 H 0.135 0.865 47 H 0.077 0.923 48 H 0.088 0.912 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.917 -0.406 -2.881 3.051 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.278 6.278 3 C 0.301 3.699 4 O -0.396 6.396 5 C -0.151 4.151 6 C -0.134 4.134 7 C -0.127 4.127 8 H 0.117 0.883 9 C -0.188 4.188 10 C 0.020 3.980 11 H 0.135 0.865 12 N -0.373 5.373 13 C 0.350 3.650 14 O -0.392 6.392 15 C -0.179 4.179 16 C 0.144 3.856 17 O -0.189 6.189 18 C -0.076 4.076 19 C -0.233 4.233 20 C -0.067 4.067 21 C -0.167 4.167 22 C -0.179 4.179 23 O -0.336 6.336 24 Si 0.585 3.415 25 C -0.038 4.038 26 C -0.180 4.180 27 H 0.082 0.918 28 H 0.082 0.918 29 H 0.121 0.879 30 H 0.125 0.875 31 H 0.125 0.875 32 H 0.094 0.906 33 H 0.093 0.907 34 H 0.105 0.895 35 H 0.093 0.907 36 H 0.234 0.766 37 H 0.076 0.924 38 H 0.123 0.877 39 H 0.078 0.922 40 H 0.158 0.842 41 H 0.151 0.849 42 H 0.137 0.863 43 H 0.224 0.776 44 H -0.181 1.181 45 H -0.185 1.185 46 H 0.153 0.847 47 H 0.096 0.904 48 H 0.107 0.893 Dipole moment (debyes) X Y Z Total from point charges 0.926 -0.324 -2.885 3.047 hybrid contribution -0.139 0.893 0.764 1.184 sum 0.788 0.569 -2.120 2.332 Atomic orbital electron populations 1.23297 0.76020 1.03926 1.02666 1.86514 1.23737 1.33572 1.84021 1.23935 0.92434 0.81327 0.72187 1.90691 1.67372 1.36369 1.45133 1.21448 0.87142 1.00371 1.06149 1.21400 0.94280 0.93715 1.04023 1.22381 0.94676 0.97618 0.98031 0.88328 1.23597 0.98372 1.00030 0.96825 1.22500 0.97761 0.88521 0.89255 0.86536 1.45906 1.16276 1.32192 1.42911 1.17981 0.81982 0.84362 0.80712 1.90838 1.45892 1.39062 1.63448 1.19366 0.94055 1.00757 1.03742 1.19101 0.88112 0.87318 0.91040 1.86384 1.23356 1.47391 1.61790 1.23238 0.83924 1.03512 0.96970 1.21232 1.01950 0.97691 1.02424 1.21038 0.92035 0.96982 0.96600 1.20055 0.96299 0.99542 1.00849 1.24940 1.01684 0.95261 0.96006 1.86605 1.38839 1.63649 1.44525 0.95031 0.79306 0.82647 0.84521 1.20974 0.97598 0.90959 0.94261 1.23408 0.97599 0.97169 0.99786 0.91796 0.91796 0.87921 0.87454 0.87454 0.90584 0.90718 0.89527 0.90690 0.76570 0.92374 0.87657 0.92238 0.84165 0.84853 0.86302 0.77581 1.18086 1.18500 0.84736 0.90412 0.89343 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.56 101.05 1.07 1.06 16 2 O -0.36 -0.58 10.57 -39.26 -0.41 -0.99 16 3 C 0.46 0.81 7.96 36.01 0.29 1.09 16 4 O -0.51 -2.42 15.73 -18.75 -0.30 -2.71 16 5 C -0.11 0.18 5.80 -27.88 -0.16 0.02 16 6 C -0.10 0.13 4.34 -26.73 -0.12 0.01 16 7 C -0.11 0.23 3.65 -89.80 -0.33 -0.10 16 8 H 0.10 -0.27 8.13 -51.93 -0.42 -0.69 16 9 C -0.15 0.17 7.43 -25.92 -0.19 -0.02 16 10 C 0.12 0.00 4.24 -67.12 -0.28 -0.29 16 11 H 0.12 0.20 7.46 -51.93 -0.39 -0.19 16 12 N -0.72 -0.36 5.31 -54.06 -0.29 -0.65 16 13 C 0.56 2.05 7.76 -12.47 -0.10 1.96 16 14 O -0.52 -3.83 14.76 -16.59 -0.24 -4.07 16 15 C -0.18 -0.39 5.89 -104.85 -0.62 -1.00 16 16 C 0.19 0.45 6.70 -38.69 -0.26 0.19 16 17 O -0.28 -0.98 8.57 -40.53 -0.35 -1.32 16 18 C 0.02 -0.02 9.81 101.05 0.99 0.97 16 19 C -0.21 0.06 9.03 -39.47 -0.36 -0.30 16 20 C -0.05 0.06 8.65 -39.53 -0.34 -0.28 16 21 C -0.17 0.14 5.35 -104.67 -0.56 -0.42 16 22 C -0.07 0.10 2.79 36.01 0.10 0.20 16 23 O -0.53 -0.02 12.83 -35.23 -0.45 -0.47 16 24 Si 0.68 -1.29 29.86 -169.99 -5.08 -6.37 16 25 C -0.02 0.00 9.16 -39.20 -0.36 -0.36 16 26 C -0.14 0.24 7.39 -25.91 -0.19 0.05 16 27 H 0.06 -0.01 8.13 -51.93 -0.42 -0.44 16 28 H 0.06 -0.01 8.13 -51.93 -0.42 -0.44 16 29 H 0.10 -0.27 8.14 -51.93 -0.42 -0.69 16 30 H 0.11 -0.30 8.14 -51.93 -0.42 -0.72 16 31 H 0.11 -0.33 8.14 -51.93 -0.42 -0.75 16 32 H 0.08 -0.03 8.10 -51.93 -0.42 -0.45 16 33 H 0.07 -0.04 7.81 -51.93 -0.41 -0.44 16 34 H 0.09 -0.11 7.90 -51.93 -0.41 -0.52 16 35 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 36 H 0.40 -0.71 6.76 -40.82 -0.28 -0.98 16 37 H 0.06 -0.13 7.66 -51.93 -0.40 -0.53 16 38 H 0.11 -0.19 8.14 -51.93 -0.42 -0.61 16 39 H 0.06 -0.15 7.66 -51.93 -0.40 -0.54 16 40 H 0.14 -0.35 6.30 -52.48 -0.33 -0.68 16 41 H 0.13 -0.42 4.81 -52.49 -0.25 -0.67 16 42 H 0.12 -0.27 7.96 -51.93 -0.41 -0.68 16 43 H 0.38 -0.95 8.70 45.56 0.40 -0.56 16 44 H -0.26 -0.42 7.11 56.52 0.40 -0.02 16 45 H -0.26 0.02 7.01 56.52 0.40 0.42 16 46 H 0.13 -0.26 6.40 -52.49 -0.34 -0.60 16 47 H 0.08 -0.13 8.14 -51.93 -0.42 -0.56 16 48 H 0.09 -0.19 8.08 -51.93 -0.42 -0.61 16 LS Contribution 397.10 15.07 5.98 5.98 Total: 0.00 -10.64 397.10 -9.61 -20.25 By element: Atomic # 1 Polarization: -5.36 SS G_CDS: -7.06 Total: -12.42 kcal Atomic # 6 Polarization: 4.20 SS G_CDS: -1.42 Total: 2.78 kcal Atomic # 7 Polarization: -0.36 SS G_CDS: -0.29 Total: -0.65 kcal Atomic # 8 Polarization: -7.82 SS G_CDS: -1.75 Total: -9.57 kcal Atomic # 14 Polarization: -1.29 SS G_CDS: -5.08 Total: -6.37 kcal Total LS contribution 5.98 Total: 5.98 kcal Total: -10.64 -9.61 -20.25 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14475074_12496546.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -117.508 kcal (2) G-P(sol) polarization free energy of solvation -10.637 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -128.145 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.609 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.246 kcal (6) G-S(sol) free energy of system = (1) + (5) -137.754 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.20 seconds