Wall clock time and date at job start Sun Mar 7 2021 01:27:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45202 * 1 3 3 C 1.34230 * 116.99836 * 2 1 4 4 O 1.20833 * 119.99930 * 359.97438 * 3 2 1 5 5 C 1.50697 * 120.00262 * 180.27336 * 3 2 1 6 6 C 1.52996 * 109.47491 * 179.72204 * 5 3 2 7 7 C 1.53003 * 109.47301 * 179.97438 * 6 5 3 8 8 H 1.09006 * 112.84432 * 43.80297 * 7 6 5 9 9 C 1.53774 * 113.61490 * 174.99522 * 7 6 5 10 10 C 1.53784 * 87.08215 * 139.98051 * 9 7 6 11 11 H 1.09000 * 113.60858 * 89.11297 * 10 9 7 12 12 N 1.46487 * 113.61917 * 220.02153 * 10 9 7 13 13 C 1.34777 * 120.00296 * 205.00198 * 12 10 9 14 14 O 1.21595 * 119.99818 * 359.97438 * 13 12 10 15 15 C 1.47558 * 120.00289 * 179.97438 * 13 12 10 16 16 C 1.39833 * 120.00180 * 359.72132 * 15 13 12 17 17 C 1.36563 * 119.99615 * 179.74304 * 16 15 13 18 18 C 1.39816 * 120.00599 * 0.53262 * 17 16 15 19 19 C 1.47557 * 120.00023 * 179.76243 * 18 17 16 20 20 C 1.34978 * 125.27897 * 359.97438 * 19 18 17 21 21 C 1.37798 * 114.70124 * 180.02562 * 20 19 18 22 22 C 1.33738 * 115.08239 * 359.97438 * 21 20 19 23 23 C 1.50703 * 125.11938 * 179.97438 * 22 21 20 24 24 O 1.42898 * 109.47182 * 300.00456 * 23 22 21 25 25 Si 1.86304 * 109.47250 * 180.02562 * 23 22 21 26 26 S 1.75856 * 109.76299 * 359.74055 * 22 21 20 27 27 C 1.39827 * 119.99904 * 359.74552 * 18 17 16 28 28 C 1.36564 * 120.00121 * 359.96770 * 27 18 17 29 29 C 1.53771 * 113.61501 * 272.49930 * 7 6 5 30 30 H 1.08998 * 109.47630 * 300.00638 * 1 2 3 31 31 H 1.09004 * 109.46770 * 60.01042 * 1 2 3 32 32 H 1.09001 * 109.46882 * 180.02562 * 1 2 3 33 33 H 1.09004 * 109.46801 * 299.72165 * 5 3 2 34 34 H 1.09000 * 109.47461 * 59.71633 * 5 3 2 35 35 H 1.09004 * 109.47066 * 299.99799 * 6 5 3 36 36 H 1.08994 * 109.47405 * 59.99969 * 6 5 3 37 37 H 1.09004 * 113.62076 * 254.53223 * 9 7 6 38 38 H 1.09003 * 113.61625 * 25.43905 * 9 7 6 39 39 H 0.97000 * 120.00243 * 24.99603 * 12 10 9 40 40 H 1.08000 * 120.00023 * 0.02562 * 16 15 13 41 41 H 1.08009 * 119.99527 * 180.29579 * 17 16 15 42 42 H 1.07997 * 122.64557 * 359.97438 * 20 19 18 43 43 H 1.08000 * 122.45475 * 179.97438 * 21 20 19 44 44 H 1.08997 * 109.47239 * 60.00198 * 23 22 21 45 45 H 0.96702 * 114.00585 * 179.97438 * 24 23 22 46 46 H 1.48498 * 109.99661 * 298.68257 * 25 23 22 47 47 H 1.48501 * 110.00024 * 60.00015 * 25 23 22 48 48 H 1.07999 * 119.99853 * 179.97438 * 27 18 17 49 49 H 1.07998 * 119.99828 * 180.02562 * 28 27 18 50 50 H 1.09006 * 113.61493 * 334.56510 * 29 7 6 51 51 H 1.08994 * 113.62121 * 105.46774 * 29 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4032 2.2094 -0.0005 5 6 3.5663 1.2750 -0.0062 6 6 4.0000 2.7422 -0.0119 7 6 5.5279 2.8223 -0.0176 8 1 5.9860 2.1185 -0.7126 9 6 6.0691 4.2559 -0.1464 10 6 7.1415 3.8596 0.8821 11 1 8.0418 3.4390 0.4340 12 7 7.4293 4.9082 1.8636 13 6 8.6267 4.9428 2.4814 14 8 9.4679 4.1033 2.2243 15 6 8.9168 5.9994 3.4697 16 6 7.9516 6.9683 3.7611 17 6 8.2183 7.9430 4.6796 18 6 9.4604 7.9789 5.3205 19 6 9.7503 9.0352 6.3091 20 6 8.8983 10.0165 6.6740 21 6 9.3954 10.8894 7.6173 22 6 10.6423 10.6320 8.0267 23 6 11.4038 11.4387 9.0467 24 8 11.5356 12.7853 8.5871 25 14 13.0958 10.6969 9.2876 26 16 11.2570 9.2065 7.2005 27 6 10.4277 7.0135 5.0249 28 6 10.1590 6.0352 4.1107 29 6 6.1513 2.7972 1.3879 30 1 -0.3634 0.5139 0.8899 31 1 -0.3633 0.5137 -0.8901 32 1 -0.3633 -1.0277 0.0005 33 1 3.9595 0.7833 0.8836 34 1 3.9525 0.7785 -0.8964 35 1 3.6067 3.2339 -0.9017 36 1 3.6139 3.2387 0.8782 37 1 6.4731 4.4832 -1.1330 38 1 5.3781 5.0176 0.2148 39 1 6.7582 5.5778 2.0690 40 1 6.9936 6.9431 3.2631 41 1 7.4710 8.6886 4.9082 42 1 7.9057 10.1104 6.2589 43 1 8.8202 11.7205 7.9980 44 1 10.8644 11.4292 9.9937 45 1 12.0162 13.3633 9.1953 46 1 12.9732 9.3069 9.7956 47 1 13.8413 10.7045 8.0033 48 1 11.3873 7.0414 5.5196 49 1 10.9061 5.2893 3.8827 50 1 5.4828 3.1600 2.1687 51 1 6.6217 1.8468 1.6401 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14475074_13308390.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:27:36 Heat of formation + Delta-G solvation = -71.943729 kcal Electronic energy + Delta-G solvation = -32664.550356 eV Core-core repulsion = 28008.820133 eV Total energy + Delta-G solvation = -4655.730223 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 402.138 amu Computer time = 1.35 seconds Orbital eigenvalues (eV) -41.62282 -41.35678 -40.42925 -39.44046 -38.79919 -37.53913 -37.44044 -35.27252 -33.85745 -33.12894 -32.21256 -30.59555 -29.13801 -27.53762 -26.86474 -26.58621 -24.81336 -24.04694 -23.55761 -22.86263 -21.70110 -21.42002 -20.79254 -20.14441 -18.98632 -18.62233 -18.55854 -18.27818 -17.65061 -17.50967 -17.28498 -17.04577 -16.41140 -16.22460 -16.02944 -15.98484 -15.59833 -15.50501 -15.36313 -15.00441 -14.66340 -14.60334 -14.47345 -14.30633 -14.11315 -14.10131 -13.90912 -13.56720 -13.51193 -13.28584 -13.20919 -13.10023 -13.06186 -12.77404 -12.66070 -12.40951 -12.31664 -12.11044 -12.03477 -11.78279 -11.77507 -11.70215 -11.38682 -11.30475 -10.89307 -10.79979 -10.41171 -10.22958 -10.05136 -9.57791 -9.03974 -5.30896 -0.90125 0.23635 0.30542 0.40727 0.74473 1.12460 1.22565 1.48158 1.59650 1.73147 1.85224 2.00455 2.11458 2.82862 3.26743 3.37104 3.38564 3.42162 3.61188 3.63386 3.67877 3.73378 3.74757 3.77120 3.79425 4.02699 4.10844 4.13687 4.16129 4.24471 4.24968 4.26677 4.38134 4.39139 4.47091 4.49427 4.55118 4.58855 4.61395 4.62540 4.72380 4.79053 4.85577 4.93751 4.96268 4.99734 5.06606 5.09895 5.20093 5.24367 5.25924 5.28889 5.42888 5.43651 5.52284 5.69809 6.45214 6.47662 6.75647 7.18943 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.362 6.362 3 C 0.458 3.542 4 O -0.508 6.508 5 C -0.114 4.114 6 C -0.097 4.097 7 C -0.108 4.108 8 H 0.099 0.901 9 C -0.141 4.141 10 C 0.122 3.878 11 H 0.118 0.882 12 N -0.716 5.716 13 C 0.560 3.440 14 O -0.534 6.534 15 C -0.137 4.137 16 C -0.078 4.078 17 C -0.109 4.109 18 C 0.013 3.987 19 C -0.145 4.145 20 C -0.118 4.118 21 C -0.099 4.099 22 C -0.174 4.174 23 C -0.034 4.034 24 O -0.543 6.543 25 Si 0.667 3.333 26 S 0.112 5.888 27 C -0.121 4.121 28 C -0.048 4.048 29 C -0.150 4.150 30 H 0.063 0.937 31 H 0.064 0.936 32 H 0.103 0.897 33 H 0.107 0.893 34 H 0.108 0.892 35 H 0.076 0.924 36 H 0.074 0.926 37 H 0.078 0.922 38 H 0.088 0.912 39 H 0.401 0.599 40 H 0.131 0.869 41 H 0.135 0.865 42 H 0.148 0.852 43 H 0.148 0.852 44 H 0.085 0.915 45 H 0.385 0.615 46 H -0.238 1.238 47 H -0.235 1.235 48 H 0.129 0.871 49 H 0.142 0.858 50 H 0.087 0.913 51 H 0.075 0.925 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.309 1.896 3.060 3.831 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.278 6.278 3 C 0.301 3.699 4 O -0.396 6.396 5 C -0.151 4.151 6 C -0.134 4.134 7 C -0.127 4.127 8 H 0.117 0.883 9 C -0.179 4.179 10 C 0.017 3.983 11 H 0.136 0.864 12 N -0.367 5.367 13 C 0.348 3.652 14 O -0.411 6.411 15 C -0.140 4.140 16 C -0.096 4.096 17 C -0.129 4.129 18 C 0.011 3.989 19 C -0.262 4.262 20 C -0.149 4.149 21 C -0.129 4.129 22 C -0.291 4.291 23 C -0.147 4.147 24 O -0.349 6.349 25 Si 0.566 3.434 26 S 0.379 5.621 27 C -0.140 4.140 28 C -0.067 4.067 29 C -0.189 4.189 30 H 0.082 0.918 31 H 0.082 0.918 32 H 0.121 0.879 33 H 0.125 0.875 34 H 0.126 0.874 35 H 0.095 0.905 36 H 0.093 0.907 37 H 0.097 0.903 38 H 0.107 0.893 39 H 0.236 0.764 40 H 0.148 0.852 41 H 0.153 0.847 42 H 0.165 0.835 43 H 0.165 0.835 44 H 0.103 0.897 45 H 0.233 0.767 46 H -0.162 1.162 47 H -0.158 1.158 48 H 0.146 0.854 49 H 0.159 0.841 50 H 0.105 0.895 51 H 0.094 0.906 Dipole moment (debyes) X Y Z Total from point charges 0.693 -0.099 2.196 2.305 hybrid contribution -2.478 1.204 0.021 2.755 sum -1.785 1.104 2.217 3.053 Atomic orbital electron populations 1.23302 0.75981 1.03951 1.02675 1.86514 1.23767 1.33551 1.84001 1.23923 0.92422 0.81339 0.72190 1.90691 1.67376 1.36366 1.45150 1.21444 0.87186 1.00328 1.06169 1.21399 0.94215 0.93773 1.04031 1.22383 0.94744 0.97602 0.97970 0.88251 1.23407 0.97486 0.97232 0.99793 1.22558 0.97895 0.88492 0.89369 0.86426 1.45907 1.16131 1.31895 1.42813 1.18238 0.81905 0.84401 0.80617 1.90803 1.46418 1.39829 1.64083 1.20032 0.96134 0.97518 1.00366 1.20961 0.98465 0.93507 0.96707 1.20868 0.96030 0.99276 0.96721 1.18297 0.94240 0.92587 0.93752 1.23095 0.98391 1.01226 1.03441 1.20384 1.00927 0.94577 0.98987 1.19988 0.94562 1.00473 0.97889 1.23732 0.98513 1.01471 1.05379 1.23971 1.08368 0.86613 0.95767 1.86508 1.80141 1.18894 1.49391 0.94905 0.79191 0.83048 0.86208 1.84231 1.16339 1.25274 1.36265 1.20968 0.99163 0.94842 0.98986 1.20940 0.95667 0.97073 0.93043 1.23601 0.98328 1.00009 0.96914 0.91796 0.91767 0.87904 0.87469 0.87421 0.90544 0.90726 0.90305 0.89313 0.76361 0.85161 0.84744 0.83478 0.83452 0.89735 0.76692 1.16225 1.15836 0.85360 0.84061 0.89490 0.90624 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 101.05 1.07 1.05 16 2 O -0.36 -0.51 10.57 -39.26 -0.41 -0.92 16 3 C 0.46 0.69 7.96 36.00 0.29 0.98 16 4 O -0.51 -2.27 15.73 -18.76 -0.30 -2.56 16 5 C -0.11 0.21 5.80 -27.89 -0.16 0.05 16 6 C -0.10 0.17 4.34 -26.73 -0.12 0.06 16 7 C -0.11 0.28 3.65 -89.81 -0.33 -0.05 16 8 H 0.10 -0.32 8.13 -51.93 -0.42 -0.74 16 9 C -0.14 0.34 7.39 -25.92 -0.19 0.14 16 10 C 0.12 -0.08 4.24 -67.12 -0.28 -0.37 16 11 H 0.12 0.12 7.47 -51.93 -0.39 -0.27 16 12 N -0.72 0.24 5.30 -54.05 -0.29 -0.05 16 13 C 0.56 1.54 7.76 -12.46 -0.10 1.44 16 14 O -0.53 -3.43 15.93 5.28 0.08 -3.34 16 15 C -0.14 -0.23 5.88 -104.90 -0.62 -0.85 16 16 C -0.08 0.04 9.48 -39.59 -0.38 -0.33 16 17 C -0.11 0.01 9.48 -39.60 -0.38 -0.37 16 18 C 0.01 0.02 5.88 -104.91 -0.62 -0.59 16 19 C -0.14 -0.30 6.37 -36.94 -0.24 -0.54 16 20 C -0.12 -0.13 9.64 -40.90 -0.39 -0.52 16 21 C -0.10 -0.15 10.00 -41.32 -0.41 -0.56 16 22 C -0.17 -0.36 5.76 -35.89 -0.21 -0.57 16 23 C -0.03 0.01 2.95 36.01 0.11 0.12 16 24 O -0.54 0.13 12.83 -35.23 -0.45 -0.32 16 25 Si 0.67 -0.68 30.96 -169.99 -5.26 -5.94 16 26 S 0.11 0.29 19.46 -107.50 -2.09 -1.80 16 27 C -0.12 -0.22 9.54 -39.59 -0.38 -0.60 16 28 C -0.05 -0.11 9.53 -39.59 -0.38 -0.48 16 29 C -0.15 0.24 7.43 -25.92 -0.19 0.05 16 30 H 0.06 -0.02 8.13 -51.93 -0.42 -0.45 16 31 H 0.06 -0.03 8.13 -51.93 -0.42 -0.45 16 32 H 0.10 -0.29 8.14 -51.93 -0.42 -0.71 16 33 H 0.11 -0.32 8.14 -51.93 -0.42 -0.75 16 34 H 0.11 -0.36 8.14 -51.93 -0.42 -0.78 16 35 H 0.08 -0.07 8.10 -51.93 -0.42 -0.49 16 36 H 0.07 -0.07 7.80 -51.93 -0.41 -0.47 16 37 H 0.08 -0.18 8.14 -51.93 -0.42 -0.61 16 38 H 0.09 -0.26 8.08 -51.93 -0.42 -0.68 16 39 H 0.40 -1.15 6.74 -40.82 -0.28 -1.42 16 40 H 0.13 -0.46 6.38 -52.49 -0.34 -0.80 16 41 H 0.13 -0.30 6.74 -52.48 -0.35 -0.65 16 42 H 0.15 -0.20 6.88 -52.49 -0.36 -0.56 16 43 H 0.15 0.01 8.06 -52.49 -0.42 -0.41 16 44 H 0.08 -0.19 7.96 -51.93 -0.41 -0.61 16 45 H 0.38 -2.08 8.74 45.56 0.40 -1.68 16 46 H -0.24 -0.29 7.11 56.52 0.40 0.11 16 47 H -0.23 -0.51 7.11 56.52 0.40 -0.11 16 48 H 0.13 0.13 7.26 -52.49 -0.38 -0.25 16 49 H 0.14 0.31 7.64 -52.49 -0.40 -0.09 16 50 H 0.09 -0.15 7.90 -51.93 -0.41 -0.56 16 51 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 LS Contribution 439.48 15.07 6.62 6.62 Total: 0.00 -11.03 439.48 -13.16 -24.19 By element: Atomic # 1 Polarization: -6.76 SS G_CDS: -7.17 Total: -13.93 kcal Atomic # 6 Polarization: 1.96 SS G_CDS: -3.90 Total: -1.94 kcal Atomic # 7 Polarization: 0.24 SS G_CDS: -0.29 Total: -0.05 kcal Atomic # 8 Polarization: -6.07 SS G_CDS: -1.08 Total: -7.15 kcal Atomic # 14 Polarization: -0.68 SS G_CDS: -5.26 Total: -5.94 kcal Atomic # 16 Polarization: 0.29 SS G_CDS: -2.09 Total: -1.80 kcal Total LS contribution 6.62 Total: 6.62 kcal Total: -11.03 -13.16 -24.19 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14475074_13308390.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -47.751 kcal (2) G-P(sol) polarization free energy of solvation -11.031 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -58.782 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.161 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.193 kcal (6) G-S(sol) free energy of system = (1) + (5) -71.944 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.35 seconds