Wall clock time and date at job start Sun Mar 7 2021 01:27:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45194 * 1 3 3 C 1.34230 * 117.00096 * 2 1 4 4 O 1.20825 * 119.99873 * 359.97438 * 3 2 1 5 5 C 1.50701 * 120.00064 * 179.97438 * 3 2 1 6 6 C 1.52997 * 109.47229 * 179.97438 * 5 3 2 7 7 C 1.52997 * 109.47345 * 180.02562 * 6 5 3 8 8 H 1.09003 * 112.90601 * 43.74991 * 7 6 5 9 9 C 1.53781 * 113.61516 * 174.99964 * 7 6 5 10 10 C 1.53776 * 87.08075 * 139.98001 * 9 7 6 11 11 H 1.09004 * 113.61490 * 89.20361 * 10 9 7 12 12 N 1.46500 * 113.61805 * 220.01540 * 10 9 7 13 13 C 1.34779 * 120.00617 * 205.00009 * 12 10 9 14 14 O 1.21592 * 119.99377 * 0.02562 * 13 12 10 15 15 C 1.47536 * 120.00191 * 180.02562 * 13 12 10 16 16 C 1.40139 * 120.18943 * 179.97438 * 15 13 12 17 17 O 1.35652 * 120.14885 * 0.04290 * 16 15 13 18 18 C 1.38710 * 119.69748 * 179.75419 * 16 15 13 19 19 C 1.38054 * 120.08179 * 0.53881 * 18 16 15 20 20 C 1.50693 * 119.80414 * 179.72633 * 19 18 16 21 21 O 1.42907 * 109.47661 * 299.73528 * 20 19 18 22 22 Si 1.86298 * 109.47618 * 179.73218 * 20 19 18 23 23 C 1.38548 * 120.39344 * 359.46092 * 19 18 16 24 24 C 1.37792 * 120.29671 * 0.27005 * 23 19 18 25 25 C 1.53776 * 87.08268 * 334.56809 * 10 9 7 26 26 H 1.09006 * 109.46773 * 60.00633 * 1 2 3 27 27 H 1.09001 * 109.47487 * 179.97438 * 1 2 3 28 28 H 1.09003 * 109.47740 * 300.00332 * 1 2 3 29 29 H 1.09000 * 109.46999 * 59.99920 * 5 3 2 30 30 H 1.08996 * 109.47402 * 299.99989 * 5 3 2 31 31 H 1.09000 * 109.46993 * 60.00165 * 6 5 3 32 32 H 1.09005 * 109.47152 * 300.00311 * 6 5 3 33 33 H 1.09003 * 113.61380 * 25.43633 * 9 7 6 34 34 H 1.08996 * 113.69281 * 254.54412 * 9 7 6 35 35 H 0.97004 * 119.99705 * 25.01050 * 12 10 9 36 36 H 0.96700 * 113.99954 * 90.00110 * 17 16 15 37 37 H 1.07997 * 119.95896 * 180.29313 * 18 16 15 38 38 H 1.09000 * 109.46936 * 59.73151 * 20 19 18 39 39 H 0.96697 * 114.00527 * 179.97438 * 21 20 19 40 40 H 1.48506 * 109.99834 * 298.68714 * 22 20 19 41 41 H 1.48502 * 110.00011 * 59.99978 * 22 20 19 42 42 H 1.07998 * 119.85276 * 180.28790 * 23 19 18 43 43 H 1.08004 * 120.04521 * 180.02562 * 24 23 19 44 44 H 1.09004 * 113.61529 * 139.98289 * 25 10 9 45 45 H 1.08998 * 113.61773 * 270.88142 * 25 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4519 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2748 0.0006 6 6 4.0001 2.7420 -0.0002 7 6 5.5280 2.8221 -0.0002 8 1 5.9896 2.1196 -0.6942 9 6 6.0697 4.2560 -0.1238 10 6 7.1383 3.8572 0.9075 11 1 8.0409 3.4391 0.4617 12 7 7.4228 4.9036 1.8926 13 6 8.6179 4.9367 2.5147 14 8 9.4603 4.0982 2.2580 15 6 8.9041 5.9903 3.5071 16 6 10.1453 6.0281 4.1568 17 8 11.0901 5.0963 3.8755 18 6 10.4053 7.0261 5.0843 19 6 9.4408 7.9706 5.3732 20 6 9.7278 9.0485 6.3865 21 8 10.0111 8.4491 7.6525 22 14 8.2432 10.1628 6.5454 23 6 8.2125 7.9366 4.7332 24 6 7.9392 6.9555 3.8051 25 6 6.1464 2.7938 1.4074 26 1 -0.3633 0.5138 -0.8901 27 1 -0.3634 -1.0276 -0.0005 28 1 -0.3635 0.5139 0.8899 29 1 3.9563 0.7805 -0.8891 30 1 3.9557 0.7810 0.8908 31 1 3.6100 3.2367 0.8893 32 1 3.6107 3.2356 -0.8907 33 1 5.3774 5.0169 0.2368 34 1 6.4773 4.4870 -1.1080 35 1 6.7509 5.5727 2.0972 36 1 11.6837 5.3436 3.1532 37 1 11.3621 7.0620 5.5839 38 1 10.5879 9.6335 6.0609 39 1 10.2060 9.0853 8.3541 40 1 7.9574 10.8168 5.2431 41 1 7.0636 9.3771 6.9888 42 1 7.4660 8.6826 4.9625 43 1 6.9804 6.9331 3.3082 44 1 6.6158 1.8428 1.6591 45 1 5.4751 3.1548 2.1866 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14475074_13422076.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:27:40 Heat of formation + Delta-G solvation = -142.912111 kcal Electronic energy + Delta-G solvation = -28023.663903 eV Core-core repulsion = 23781.001622 eV Total energy + Delta-G solvation = -4242.662281 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.150 amu Computer time = 1.78 seconds Orbital eigenvalues (eV) -41.74232 -41.43391 -40.61121 -39.21891 -38.29677 -37.52753 -37.23644 -35.16986 -33.67967 -32.49072 -31.15824 -29.16390 -27.78847 -26.86729 -26.57077 -24.03916 -23.90312 -22.72119 -21.66087 -21.38759 -20.81702 -19.22516 -18.69743 -18.57536 -18.45354 -17.67335 -17.63226 -17.48832 -16.80003 -16.67634 -16.35896 -16.14320 -15.88458 -15.63578 -15.31162 -15.16766 -14.74439 -14.50931 -14.25683 -14.10260 -13.94525 -13.89406 -13.56504 -13.47102 -13.29774 -13.06995 -13.03206 -12.76392 -12.46992 -12.37055 -12.11801 -12.03127 -11.77386 -11.76777 -11.68423 -11.38434 -11.29638 -10.73484 -10.53620 -10.12500 -10.00499 -9.78504 -5.07750 -0.42476 0.07696 1.13889 1.22709 1.52055 1.73182 1.75707 1.84849 2.10256 2.55331 3.03374 3.23516 3.38117 3.39751 3.52271 3.62655 3.65758 3.66446 3.74366 3.77470 3.99085 4.03117 4.11208 4.16289 4.17977 4.19520 4.24594 4.38162 4.47529 4.50798 4.57357 4.61497 4.62330 4.66792 4.72118 4.79119 4.91061 4.94691 5.00569 5.07720 5.12124 5.18013 5.27971 5.43076 5.49040 5.54060 6.45745 6.49311 6.70262 6.75776 7.22326 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.362 6.362 3 C 0.458 3.542 4 O -0.508 6.508 5 C -0.114 4.114 6 C -0.097 4.097 7 C -0.108 4.108 8 H 0.099 0.901 9 C -0.141 4.141 10 C 0.123 3.877 11 H 0.118 0.882 12 N -0.719 5.719 13 C 0.561 3.439 14 O -0.517 6.517 15 C -0.166 4.166 16 C 0.175 3.825 17 O -0.474 6.474 18 C -0.126 4.126 19 C -0.031 4.031 20 C -0.079 4.079 21 O -0.543 6.543 22 Si 0.688 3.312 23 C -0.143 4.143 24 C -0.063 4.063 25 C -0.150 4.150 26 H 0.063 0.937 27 H 0.103 0.897 28 H 0.063 0.937 29 H 0.108 0.892 30 H 0.107 0.893 31 H 0.074 0.926 32 H 0.076 0.924 33 H 0.088 0.912 34 H 0.078 0.922 35 H 0.399 0.601 36 H 0.398 0.602 37 H 0.143 0.857 38 H 0.080 0.920 39 H 0.385 0.615 40 H -0.253 1.253 41 H -0.249 1.249 42 H 0.127 0.873 43 H 0.134 0.866 44 H 0.075 0.925 45 H 0.086 0.914 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.521 4.455 0.255 4.492 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.278 6.278 3 C 0.301 3.699 4 O -0.396 6.396 5 C -0.151 4.151 6 C -0.134 4.134 7 C -0.127 4.127 8 H 0.118 0.882 9 C -0.179 4.179 10 C 0.018 3.982 11 H 0.136 0.864 12 N -0.371 5.371 13 C 0.348 3.652 14 O -0.393 6.393 15 C -0.170 4.170 16 C 0.129 3.871 17 O -0.286 6.286 18 C -0.144 4.144 19 C -0.032 4.032 20 C -0.189 4.189 21 O -0.350 6.350 22 Si 0.588 3.412 23 C -0.160 4.160 24 C -0.082 4.082 25 C -0.189 4.189 26 H 0.082 0.918 27 H 0.121 0.879 28 H 0.082 0.918 29 H 0.126 0.874 30 H 0.126 0.874 31 H 0.093 0.907 32 H 0.094 0.906 33 H 0.106 0.894 34 H 0.097 0.903 35 H 0.234 0.766 36 H 0.256 0.744 37 H 0.160 0.840 38 H 0.098 0.902 39 H 0.233 0.767 40 H -0.178 1.178 41 H -0.173 1.173 42 H 0.144 0.856 43 H 0.151 0.849 44 H 0.094 0.906 45 H 0.105 0.895 Dipole moment (debyes) X Y Z Total from point charges -1.311 3.436 -0.118 3.679 hybrid contribution -0.118 0.222 -0.520 0.578 sum -1.429 3.658 -0.638 3.979 Atomic orbital electron populations 1.23302 0.75985 1.03959 1.02664 1.86513 1.23764 1.33543 1.83996 1.23921 0.92418 0.81338 0.72179 1.90687 1.67381 1.36374 1.45166 1.21444 0.87190 1.00318 1.06183 1.21397 0.94221 0.93788 1.04008 1.22381 0.94744 0.97556 0.97974 0.88231 1.23404 0.97539 0.97235 0.99737 1.22541 0.97893 0.88496 0.89228 0.86429 1.45926 1.16280 1.32136 1.42758 1.18045 0.82154 0.84367 0.80639 1.90828 1.46000 1.38989 1.63523 1.20429 0.96631 0.98664 1.01258 1.18488 0.88334 0.87338 0.92962 1.84770 1.44840 1.41619 1.57327 1.21331 1.01056 0.93357 0.98689 1.19435 0.93195 0.95544 0.95003 1.24776 1.10142 0.98692 0.85284 1.86502 1.93158 1.37097 1.18243 0.95103 0.77039 0.83194 0.85844 1.20798 0.96296 0.99882 0.99071 1.21082 0.98207 0.92709 0.96168 1.23602 0.98355 1.00066 0.96876 0.91783 0.87887 0.91799 0.87415 0.87449 0.90748 0.90555 0.89387 0.90325 0.76565 0.74357 0.83957 0.90191 0.76676 1.17777 1.17310 0.85578 0.84875 0.90596 0.89541 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.56 101.05 1.07 1.06 16 2 O -0.36 -0.58 10.56 -39.26 -0.41 -1.00 16 3 C 0.46 0.80 7.96 36.01 0.29 1.09 16 4 O -0.51 -2.39 15.73 -18.75 -0.29 -2.69 16 5 C -0.11 0.18 5.80 -27.88 -0.16 0.02 16 6 C -0.10 0.14 4.34 -26.73 -0.12 0.03 16 7 C -0.11 0.25 3.65 -89.81 -0.33 -0.08 16 8 H 0.10 -0.30 8.13 -51.93 -0.42 -0.72 16 9 C -0.14 0.30 7.39 -25.92 -0.19 0.11 16 10 C 0.12 -0.04 4.24 -67.12 -0.28 -0.32 16 11 H 0.12 0.14 7.46 -51.93 -0.39 -0.25 16 12 N -0.72 -0.14 5.31 -54.06 -0.29 -0.43 16 13 C 0.56 1.88 7.76 -12.47 -0.10 1.78 16 14 O -0.52 -3.47 14.76 -16.59 -0.24 -3.71 16 15 C -0.17 -0.42 5.89 -104.85 -0.62 -1.04 16 16 C 0.18 0.55 6.72 -38.69 -0.26 0.29 16 17 O -0.47 -1.69 11.58 -40.53 -0.47 -2.16 16 18 C -0.13 -0.26 9.53 -39.47 -0.38 -0.64 16 19 C -0.03 -0.05 5.43 -104.58 -0.57 -0.61 16 20 C -0.08 0.08 2.80 36.00 0.10 0.18 16 21 O -0.54 0.21 12.74 -35.23 -0.45 -0.24 16 22 Si 0.69 -1.45 29.77 -169.99 -5.06 -6.51 16 23 C -0.14 -0.15 8.64 -39.63 -0.34 -0.49 16 24 C -0.06 -0.03 9.54 -39.20 -0.37 -0.41 16 25 C -0.15 0.17 7.43 -25.92 -0.19 -0.03 16 26 H 0.06 -0.02 8.13 -51.93 -0.42 -0.44 16 27 H 0.10 -0.27 8.14 -51.93 -0.42 -0.69 16 28 H 0.06 -0.01 8.13 -51.93 -0.42 -0.43 16 29 H 0.11 -0.34 8.14 -51.93 -0.42 -0.76 16 30 H 0.11 -0.29 8.14 -51.93 -0.42 -0.71 16 31 H 0.07 -0.04 7.80 -51.93 -0.41 -0.45 16 32 H 0.08 -0.05 8.10 -51.93 -0.42 -0.47 16 33 H 0.09 -0.24 8.08 -51.93 -0.42 -0.65 16 34 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 35 H 0.40 -0.88 6.76 -40.82 -0.28 -1.16 16 36 H 0.40 -0.20 9.06 45.56 0.41 0.21 16 37 H 0.14 0.17 8.06 -52.49 -0.42 -0.25 16 38 H 0.08 -0.22 7.96 -51.93 -0.41 -0.64 16 39 H 0.39 -2.11 8.74 45.56 0.40 -1.71 16 40 H -0.25 0.00 7.11 56.52 0.40 0.41 16 41 H -0.25 -0.27 7.11 56.52 0.40 0.13 16 42 H 0.13 0.01 4.85 -52.49 -0.25 -0.25 16 43 H 0.13 -0.34 6.40 -52.48 -0.34 -0.68 16 44 H 0.08 -0.03 8.14 -51.93 -0.42 -0.46 16 45 H 0.09 -0.09 7.90 -51.93 -0.41 -0.50 16 LS Contribution 378.62 15.07 5.71 5.71 Total: 0.00 -11.71 378.62 -9.48 -21.19 By element: Atomic # 1 Polarization: -5.57 SS G_CDS: -5.51 Total: -11.09 kcal Atomic # 6 Polarization: 3.39 SS G_CDS: -2.45 Total: 0.93 kcal Atomic # 7 Polarization: -0.14 SS G_CDS: -0.29 Total: -0.43 kcal Atomic # 8 Polarization: -7.93 SS G_CDS: -1.87 Total: -9.80 kcal Atomic # 14 Polarization: -1.45 SS G_CDS: -5.06 Total: -6.51 kcal Total LS contribution 5.71 Total: 5.71 kcal Total: -11.71 -9.48 -21.19 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14475074_13422076.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -121.725 kcal (2) G-P(sol) polarization free energy of solvation -11.707 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -133.432 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.481 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.187 kcal (6) G-S(sol) free energy of system = (1) + (5) -142.912 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.78 seconds