Wall clock time and date at job start Sun Mar 7 2021 01:28:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45198 * 1 3 3 C 1.34221 * 117.00431 * 2 1 4 4 O 1.20828 * 119.99866 * 0.02562 * 3 2 1 5 5 C 1.50703 * 120.00426 * 180.02562 * 3 2 1 6 6 C 1.53001 * 109.47303 * 180.02562 * 5 3 2 7 7 C 1.53000 * 109.46920 * 180.02562 * 6 5 3 8 8 H 1.09003 * 112.91013 * 316.25110 * 7 6 5 9 9 C 1.53779 * 113.61146 * 87.50220 * 7 6 5 10 10 C 1.53785 * 87.08200 * 139.98159 * 9 7 6 11 11 H 1.08994 * 113.69359 * 89.12411 * 10 9 7 12 12 N 1.46501 * 113.61635 * 220.02037 * 10 9 7 13 13 C 1.34769 * 120.00022 * 252.49734 * 12 10 9 14 14 O 1.21699 * 120.00072 * 359.97438 * 13 12 10 15 15 C 1.46681 * 120.00135 * 179.97438 * 13 12 10 16 16 C 1.37869 * 126.23210 * 179.97438 * 15 13 12 17 17 C 1.50701 * 126.45817 * 0.03218 * 16 15 13 18 18 C 1.39841 * 107.08438 * 179.80586 * 16 15 13 19 19 C 1.35452 * 107.86060 * 0.37307 * 18 16 15 20 20 C 1.50701 * 125.56161 * 179.87965 * 19 18 16 21 21 O 1.42896 * 109.47417 * 244.69876 * 20 19 18 22 22 Si 1.86301 * 109.47149 * 4.69892 * 20 19 18 23 23 N 1.35534 * 108.87330 * 359.62056 * 19 18 16 24 24 C 1.53775 * 113.61269 * 184.99672 * 7 6 5 25 25 H 1.09000 * 109.46800 * 299.99647 * 1 2 3 26 26 H 1.08992 * 109.47263 * 59.99215 * 1 2 3 27 27 H 1.08997 * 109.47169 * 179.97438 * 1 2 3 28 28 H 1.09002 * 109.46713 * 59.99819 * 5 3 2 29 29 H 1.09002 * 109.47094 * 300.00412 * 5 3 2 30 30 H 1.08996 * 109.47168 * 60.00397 * 6 5 3 31 31 H 1.09002 * 109.47032 * 300.00022 * 6 5 3 32 32 H 1.09004 * 113.62061 * 25.43217 * 9 7 6 33 33 H 1.09006 * 113.61726 * 254.52808 * 9 7 6 34 34 H 0.97001 * 119.99653 * 72.49158 * 12 10 9 35 35 H 1.08998 * 109.46823 * 90.00338 * 17 16 15 36 36 H 1.09000 * 109.47056 * 209.99858 * 17 16 15 37 37 H 1.08994 * 109.47119 * 330.00248 * 17 16 15 38 38 H 1.08002 * 126.06778 * 180.27351 * 18 16 15 39 39 H 1.09002 * 109.47060 * 124.69903 * 20 19 18 40 40 H 0.96699 * 114.00604 * 179.97438 * 21 20 19 41 41 H 1.48498 * 110.00005 * 299.99971 * 22 20 19 42 42 H 1.48501 * 110.00049 * 61.31633 * 22 20 19 43 43 H 0.97005 * 125.67665 * 180.27053 * 23 19 18 44 44 H 1.09008 * 113.61275 * 105.47471 * 24 7 6 45 45 H 1.08999 * 113.69694 * 334.57967 * 24 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4034 2.2093 0.0005 5 6 3.5664 1.2747 -0.0006 6 6 4.0002 2.7419 0.0002 7 6 5.5282 2.8219 -0.0011 8 1 5.9904 2.1193 0.6923 9 6 6.1453 2.7939 -1.4093 10 6 7.1378 3.8571 -0.9100 11 1 8.0407 3.4389 -0.4651 12 7 7.4214 4.9038 -1.8951 13 6 8.6159 4.9370 -2.5182 14 8 9.4592 4.0977 -2.2623 15 6 8.8996 5.9846 -3.5049 16 6 10.0714 6.1399 -4.2145 17 6 11.2965 5.2671 -4.1223 18 6 9.9070 7.2568 -5.0398 19 6 8.6683 7.7581 -4.8185 20 6 8.0775 8.9665 -5.4981 21 8 7.8509 9.9937 -4.5310 22 14 9.2588 9.5873 -6.7981 23 7 8.0447 6.9922 -3.8903 24 6 6.0700 4.2557 0.1223 25 1 -0.3633 0.5138 0.8900 26 1 -0.3633 0.5139 -0.8898 27 1 -0.3633 -1.0276 -0.0005 28 1 3.9557 0.7808 -0.8908 29 1 3.9565 0.7804 0.8891 30 1 3.6110 3.2355 0.8907 31 1 3.6101 3.2366 -0.8893 32 1 5.4733 3.1552 -2.1879 33 1 6.6145 1.8429 -1.6617 34 1 6.7493 5.5730 -2.0988 35 1 11.2198 4.4557 -4.8461 36 1 12.1838 5.8627 -4.3370 37 1 11.3719 4.8518 -3.1174 38 1 10.6385 7.6507 -5.7298 39 1 7.1320 8.6938 -5.9668 40 1 7.4711 10.8034 -4.8987 41 1 10.5519 9.9624 -6.1719 42 1 9.4780 8.5393 -7.8272 43 1 7.1454 7.1307 -3.5540 44 1 6.4784 4.4850 1.1066 45 1 5.3784 5.0178 -0.2369 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14475074_13940406.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:28:20 Heat of formation + Delta-G solvation = -94.248840 kcal Electronic energy + Delta-G solvation = -26655.157497 eV Core-core repulsion = 22640.550216 eV Total energy + Delta-G solvation = -4014.607281 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 323.161 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -42.57414 -41.52045 -40.90001 -39.29325 -37.78518 -37.55187 -35.32847 -33.74845 -33.20269 -31.67719 -29.18611 -28.17692 -27.45222 -26.85135 -26.30053 -23.67663 -22.13706 -21.63924 -21.39741 -21.10216 -20.16349 -19.29441 -18.62569 -18.57806 -17.67092 -17.52803 -17.20960 -16.85202 -16.38814 -16.29727 -15.82512 -15.52775 -15.21194 -15.02917 -14.77936 -14.64885 -14.34529 -14.10591 -13.95005 -13.82099 -13.60521 -13.52573 -13.40268 -13.21963 -13.10530 -13.02415 -12.79951 -12.45639 -12.41330 -12.06261 -11.99933 -11.79359 -11.73555 -11.41029 -11.33156 -10.90927 -10.58126 -10.13332 -9.82051 -9.14123 -5.06957 0.36579 1.09326 1.20550 1.49284 1.66194 1.71096 1.95525 2.03438 2.12578 2.36713 3.17983 3.34774 3.36833 3.61392 3.68152 3.71439 3.72637 3.82817 4.00254 4.04820 4.08508 4.12721 4.14588 4.22806 4.34262 4.36708 4.44802 4.54228 4.57824 4.60024 4.69155 4.71936 4.75753 4.83073 4.91817 4.95176 5.02497 5.07231 5.21449 5.23094 5.39136 5.41971 5.48380 5.67464 5.89538 6.24177 6.40206 6.46499 6.73658 7.16003 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.362 6.362 3 C 0.458 3.542 4 O -0.509 6.509 5 C -0.114 4.114 6 C -0.096 4.096 7 C -0.107 4.107 8 H 0.100 0.900 9 C -0.150 4.150 10 C 0.124 3.876 11 H 0.120 0.880 12 N -0.723 5.723 13 C 0.593 3.407 14 O -0.522 6.522 15 C -0.056 4.056 16 C -0.062 4.062 17 C -0.093 4.093 18 C -0.207 4.207 19 C 0.072 3.928 20 C -0.059 4.059 21 O -0.549 6.549 22 Si 0.716 3.284 23 N -0.522 5.522 24 C -0.141 4.141 25 H 0.064 0.936 26 H 0.063 0.937 27 H 0.103 0.897 28 H 0.107 0.893 29 H 0.108 0.892 30 H 0.076 0.924 31 H 0.073 0.927 32 H 0.085 0.915 33 H 0.076 0.924 34 H 0.394 0.606 35 H 0.070 0.930 36 H 0.064 0.936 37 H 0.083 0.917 38 H 0.143 0.857 39 H 0.075 0.925 40 H 0.387 0.613 41 H -0.247 1.247 42 H -0.252 1.252 43 H 0.417 0.583 44 H 0.079 0.921 45 H 0.087 0.913 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.910 2.225 -2.046 4.942 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.278 6.278 3 C 0.301 3.699 4 O -0.396 6.396 5 C -0.151 4.151 6 C -0.134 4.134 7 C -0.126 4.126 8 H 0.118 0.882 9 C -0.188 4.188 10 C 0.019 3.981 11 H 0.138 0.862 12 N -0.373 5.373 13 C 0.381 3.619 14 O -0.397 6.397 15 C -0.169 4.169 16 C -0.071 4.071 17 C -0.150 4.150 18 C -0.231 4.231 19 C -0.046 4.046 20 C -0.169 4.169 21 O -0.356 6.356 22 Si 0.615 3.385 23 N -0.119 5.119 24 C -0.180 4.180 25 H 0.082 0.918 26 H 0.082 0.918 27 H 0.121 0.879 28 H 0.125 0.875 29 H 0.126 0.874 30 H 0.095 0.905 31 H 0.092 0.908 32 H 0.104 0.896 33 H 0.095 0.905 34 H 0.228 0.772 35 H 0.088 0.912 36 H 0.083 0.917 37 H 0.102 0.898 38 H 0.160 0.840 39 H 0.093 0.907 40 H 0.235 0.765 41 H -0.171 1.171 42 H -0.176 1.176 43 H 0.254 0.746 44 H 0.097 0.903 45 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges -2.656 1.308 -1.753 3.441 hybrid contribution -1.450 0.061 0.390 1.502 sum -4.106 1.368 -1.364 4.538 Atomic orbital electron populations 1.23302 0.75964 1.03969 1.02670 1.86511 1.23778 1.33535 1.83984 1.23917 0.92415 0.81344 0.72185 1.90689 1.67386 1.36373 1.45173 1.21446 0.87204 1.00292 1.06191 1.21395 0.94199 0.93806 1.04000 1.22381 0.94766 0.97544 0.97941 0.88168 1.23602 0.98307 1.00045 0.96880 1.22564 0.98014 0.88364 0.89144 0.86245 1.45887 1.16103 1.32189 1.43136 1.17018 0.81964 0.83292 0.79619 1.90832 1.45947 1.38821 1.64126 1.20224 0.93470 0.96373 1.06821 1.19905 0.94603 0.96736 0.95821 1.20395 0.92844 0.97763 1.03981 1.20479 0.96174 1.00551 1.05921 1.19894 0.93959 0.94830 0.95878 1.24518 1.07040 0.87260 0.98103 1.86486 1.86721 1.26470 1.35916 0.95199 0.79148 0.86603 0.77569 1.41823 1.15020 1.22440 1.32588 1.23408 0.97511 0.97230 0.99810 0.91764 0.91808 0.87876 0.87459 0.87391 0.90529 0.90796 0.89628 0.90528 0.77208 0.91155 0.91726 0.89825 0.83991 0.90665 0.76468 1.17150 1.17636 0.74574 0.90263 0.89445 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 101.05 1.07 1.05 16 2 O -0.36 -0.49 10.56 -39.23 -0.41 -0.91 16 3 C 0.46 0.68 7.96 36.01 0.29 0.96 16 4 O -0.51 -2.26 15.73 -18.75 -0.29 -2.55 16 5 C -0.11 0.22 5.80 -27.88 -0.16 0.05 16 6 C -0.10 0.17 4.34 -26.73 -0.12 0.05 16 7 C -0.11 0.28 3.65 -89.81 -0.33 -0.05 16 8 H 0.10 -0.32 8.13 -51.93 -0.42 -0.74 16 9 C -0.15 0.24 7.43 -25.92 -0.19 0.05 16 10 C 0.12 -0.07 4.24 -67.11 -0.28 -0.35 16 11 H 0.12 0.12 7.46 -51.93 -0.39 -0.27 16 12 N -0.72 -0.02 5.35 -54.32 -0.29 -0.31 16 13 C 0.59 2.04 7.79 -12.86 -0.10 1.94 16 14 O -0.52 -3.38 14.40 5.19 0.07 -3.30 16 15 C -0.06 -0.19 7.06 -81.98 -0.58 -0.76 16 16 C -0.06 -0.26 6.21 -104.16 -0.65 -0.91 16 17 C -0.09 -0.31 9.83 36.01 0.35 0.04 16 18 C -0.21 -0.71 9.27 -39.98 -0.37 -1.08 16 19 C 0.07 0.14 6.50 -81.95 -0.53 -0.39 16 20 C -0.06 0.07 3.07 36.01 0.11 0.18 16 21 O -0.55 0.62 12.86 -35.23 -0.45 0.17 16 22 Si 0.72 -1.38 30.56 -169.99 -5.19 -6.57 16 23 N -0.52 -0.56 5.99 -5.70 -0.03 -0.59 16 24 C -0.14 0.32 7.39 -25.92 -0.19 0.13 16 25 H 0.06 -0.03 8.13 -51.93 -0.42 -0.45 16 26 H 0.06 -0.03 8.13 -51.93 -0.42 -0.45 16 27 H 0.10 -0.29 8.14 -51.93 -0.42 -0.72 16 28 H 0.11 -0.33 8.14 -51.93 -0.42 -0.75 16 29 H 0.11 -0.37 8.14 -51.93 -0.42 -0.79 16 30 H 0.08 -0.07 8.10 -51.93 -0.42 -0.49 16 31 H 0.07 -0.07 7.80 -51.93 -0.41 -0.47 16 32 H 0.09 -0.14 7.90 -51.93 -0.41 -0.55 16 33 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 34 H 0.39 -0.95 7.86 -40.82 -0.32 -1.27 16 35 H 0.07 0.20 8.14 -51.93 -0.42 -0.22 16 36 H 0.06 0.13 8.14 -51.93 -0.42 -0.29 16 37 H 0.08 0.39 6.48 -51.93 -0.34 0.05 16 38 H 0.14 0.36 6.19 -52.49 -0.32 0.04 16 39 H 0.08 -0.24 7.96 -51.93 -0.41 -0.65 16 40 H 0.39 -2.40 8.74 45.56 0.40 -2.00 16 41 H -0.25 -0.38 7.11 56.52 0.40 0.02 16 42 H -0.25 -0.19 7.11 56.52 0.40 0.21 16 43 H 0.42 -0.77 8.19 -40.82 -0.33 -1.11 16 44 H 0.08 -0.17 8.14 -51.92 -0.42 -0.60 16 45 H 0.09 -0.24 8.08 -51.93 -0.42 -0.66 16 LS Contribution 376.90 15.07 5.68 5.68 Total: 0.00 -10.73 376.90 -9.41 -20.14 By element: Atomic # 1 Polarization: -5.86 SS G_CDS: -6.80 Total: -12.66 kcal Atomic # 6 Polarization: 2.60 SS G_CDS: -1.69 Total: 0.91 kcal Atomic # 7 Polarization: -0.58 SS G_CDS: -0.32 Total: -0.90 kcal Atomic # 8 Polarization: -5.51 SS G_CDS: -1.09 Total: -6.59 kcal Atomic # 14 Polarization: -1.38 SS G_CDS: -5.19 Total: -6.57 kcal Total LS contribution 5.68 Total: 5.68 kcal Total: -10.73 -9.41 -20.14 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14475074_13940406.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -74.109 kcal (2) G-P(sol) polarization free energy of solvation -10.730 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -84.839 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.410 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.140 kcal (6) G-S(sol) free energy of system = (1) + (5) -94.249 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds