Wall clock time and date at job start Sun Mar 7 2021 01:28:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45202 * 1 3 3 C 1.34228 * 116.99869 * 2 1 4 4 O 1.20824 * 119.99884 * 0.02562 * 3 2 1 5 5 C 1.50701 * 120.00192 * 180.02562 * 3 2 1 6 6 C 1.52997 * 109.47358 * 180.02562 * 5 3 2 7 7 C 1.52995 * 109.47220 * 180.02562 * 6 5 3 8 8 H 1.09006 * 112.85095 * 43.80036 * 7 6 5 9 9 C 1.53775 * 113.61647 * 175.00275 * 7 6 5 10 10 C 1.53774 * 87.08475 * 139.98283 * 9 7 6 11 11 H 1.09004 * 113.61848 * 89.19835 * 10 9 7 12 12 N 1.46503 * 113.61400 * 220.02156 * 10 9 7 13 13 C 1.34779 * 119.99846 * 205.00063 * 12 10 9 14 14 O 1.21281 * 120.00030 * 359.97438 * 13 12 10 15 15 C 1.50703 * 119.99958 * 179.97438 * 13 12 10 16 16 C 1.50700 * 109.47254 * 179.97438 * 15 13 12 17 17 C 1.34850 * 125.88863 * 275.04251 * 16 15 13 18 18 C 1.40896 * 107.41567 * 179.73060 * 17 16 15 19 19 C 1.34851 * 107.41302 * 0.37880 * 18 17 16 20 20 C 1.50701 * 125.88836 * 179.88177 * 19 18 17 21 21 O 1.42896 * 109.47417 * 244.69282 * 20 19 18 22 22 Si 1.86301 * 109.47149 * 4.69299 * 20 19 18 23 23 N 1.36338 * 125.88930 * 94.99796 * 16 15 13 24 24 C 1.53778 * 87.08213 * 334.56529 * 10 9 7 25 25 H 1.09004 * 109.46654 * 180.02562 * 1 2 3 26 26 H 1.08997 * 109.46864 * 299.99259 * 1 2 3 27 27 H 1.08988 * 109.47412 * 59.99759 * 1 2 3 28 28 H 1.09001 * 109.46474 * 59.99933 * 5 3 2 29 29 H 1.09007 * 109.47065 * 300.00623 * 5 3 2 30 30 H 1.09000 * 109.46937 * 59.99932 * 6 5 3 31 31 H 1.09003 * 109.46928 * 300.00229 * 6 5 3 32 32 H 1.08998 * 113.61535 * 25.42632 * 9 7 6 33 33 H 1.09008 * 113.61259 * 254.53298 * 9 7 6 34 34 H 0.96995 * 119.99929 * 24.99434 * 12 10 9 35 35 H 1.08999 * 109.46897 * 59.99750 * 15 13 12 36 36 H 1.08994 * 109.47255 * 299.99755 * 15 13 12 37 37 H 1.08001 * 126.29352 * 359.97438 * 17 16 15 38 38 H 1.07996 * 126.29011 * 180.23653 * 18 17 16 39 39 H 1.09002 * 109.47060 * 124.69309 * 20 19 18 40 40 H 0.96708 * 114.00101 * 59.99427 * 21 20 19 41 41 H 1.48494 * 109.99914 * 58.67711 * 22 20 19 42 42 H 1.48493 * 110.00101 * 179.97438 * 22 20 19 43 43 H 0.96995 * 125.63783 * 0.05579 * 23 16 15 44 44 H 1.08997 * 113.61446 * 139.97597 * 24 10 9 45 45 H 1.09002 * 113.62120 * 270.89035 * 24 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2750 -0.0006 6 6 4.0001 2.7421 0.0002 7 6 5.5279 2.8223 -0.0011 8 1 5.9880 2.1210 -0.6973 9 6 6.0695 4.2563 -0.1231 10 6 7.1391 3.8562 0.9067 11 1 8.0413 3.4386 0.4596 12 7 7.4243 4.9013 1.8929 13 6 8.6200 4.9336 2.5140 14 8 9.4597 4.0972 2.2568 15 6 8.9136 6.0091 3.5281 16 6 10.3069 5.8211 4.0706 17 6 10.6559 5.0084 5.0885 18 6 12.0485 5.1288 5.2659 19 6 12.4960 6.0169 4.3551 20 6 13.9263 6.4577 4.1797 21 8 14.0371 7.8490 4.4864 22 14 15.0224 5.4801 5.3259 23 7 11.4321 6.4428 3.6164 24 6 6.1476 2.7921 1.4061 25 1 -0.3633 -1.0277 0.0005 26 1 -0.3633 0.5137 0.8900 27 1 -0.3633 0.5138 -0.8898 28 1 3.9556 0.7810 -0.8909 29 1 3.9564 0.7806 0.8891 30 1 3.6107 3.2356 0.8907 31 1 3.6099 3.2368 -0.8893 32 1 5.3776 5.0167 0.2389 33 1 6.4762 4.4871 -1.1078 34 1 6.7526 5.5701 2.0988 35 1 8.1943 5.9446 4.3446 36 1 8.8372 6.9870 3.0530 37 1 9.9909 4.3778 5.6600 38 1 12.6470 4.6076 5.9983 39 1 14.2352 6.2873 3.1484 40 1 13.7777 8.0744 5.3903 41 1 14.8922 4.0291 5.0383 42 1 16.4358 5.9050 5.1621 43 1 11.4695 7.0825 2.8882 44 1 6.6172 1.8408 1.6560 45 1 5.4769 3.1521 2.1863 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14475074_14644196.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:28:26 Heat of formation + Delta-G solvation = -93.284827 kcal Electronic energy + Delta-G solvation = -26108.484757 eV Core-core repulsion = 22093.919278 eV Total energy + Delta-G solvation = -4014.565478 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 323.161 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -42.27554 -41.52302 -41.01750 -39.46180 -37.65926 -37.53904 -35.16058 -33.61899 -32.76731 -31.83835 -29.55471 -28.99804 -26.97387 -26.71113 -25.19754 -23.37868 -21.85753 -21.44461 -21.28103 -21.11765 -20.60700 -18.88170 -18.57649 -18.08788 -17.66083 -17.52272 -17.36630 -16.70418 -16.41624 -16.32088 -16.12774 -15.54070 -15.14937 -15.05968 -14.62695 -14.47568 -14.21443 -14.18430 -14.01720 -13.90465 -13.74654 -13.70435 -13.58122 -13.28923 -13.09972 -12.85942 -12.70193 -12.39764 -12.04730 -11.98859 -11.88289 -11.78349 -11.71827 -11.39558 -11.31240 -10.82952 -10.58377 -10.04068 -9.69478 -8.88033 -4.94583 1.18587 1.21606 1.29733 1.62956 1.72348 1.75205 1.94614 2.02527 2.31647 2.54327 3.36323 3.39142 3.48341 3.62812 3.63968 3.71688 3.73805 3.85714 3.94269 4.01563 4.04036 4.10160 4.15488 4.23792 4.36106 4.37543 4.44943 4.46310 4.56015 4.60217 4.60704 4.61821 4.70327 4.77702 4.84584 4.93248 4.99563 5.08760 5.26834 5.33938 5.37568 5.42094 5.52360 6.07857 6.22137 6.44839 6.55068 6.68247 6.74689 7.23070 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.362 6.362 3 C 0.458 3.542 4 O -0.508 6.508 5 C -0.114 4.114 6 C -0.096 4.096 7 C -0.109 4.109 8 H 0.098 0.902 9 C -0.141 4.141 10 C 0.122 3.878 11 H 0.115 0.885 12 N -0.723 5.723 13 C 0.512 3.488 14 O -0.524 6.524 15 C -0.073 4.073 16 C 0.036 3.964 17 C -0.173 4.173 18 C -0.187 4.187 19 C -0.011 4.011 20 C -0.050 4.050 21 O -0.547 6.547 22 Si 0.720 3.280 23 N -0.535 5.535 24 C -0.149 4.149 25 H 0.103 0.897 26 H 0.063 0.937 27 H 0.063 0.937 28 H 0.107 0.893 29 H 0.107 0.893 30 H 0.074 0.926 31 H 0.075 0.925 32 H 0.089 0.911 33 H 0.076 0.924 34 H 0.401 0.599 35 H 0.117 0.883 36 H 0.099 0.901 37 H 0.136 0.864 38 H 0.142 0.858 39 H 0.109 0.891 40 H 0.381 0.619 41 H -0.255 1.255 42 H -0.256 1.256 43 H 0.412 0.588 44 H 0.074 0.926 45 H 0.087 0.913 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.397 0.909 1.723 3.916 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.278 6.278 3 C 0.301 3.699 4 O -0.396 6.396 5 C -0.151 4.151 6 C -0.134 4.134 7 C -0.128 4.128 8 H 0.116 0.884 9 C -0.179 4.179 10 C 0.017 3.983 11 H 0.132 0.868 12 N -0.375 5.375 13 C 0.297 3.703 14 O -0.399 6.399 15 C -0.114 4.114 16 C -0.078 4.078 17 C -0.198 4.198 18 C -0.211 4.211 19 C -0.124 4.124 20 C -0.160 4.160 21 O -0.352 6.352 22 Si 0.620 3.380 23 N -0.130 5.130 24 C -0.188 4.188 25 H 0.121 0.879 26 H 0.082 0.918 27 H 0.082 0.918 28 H 0.125 0.875 29 H 0.125 0.875 30 H 0.093 0.907 31 H 0.094 0.906 32 H 0.107 0.893 33 H 0.095 0.905 34 H 0.236 0.764 35 H 0.135 0.865 36 H 0.118 0.882 37 H 0.154 0.846 38 H 0.159 0.841 39 H 0.127 0.873 40 H 0.229 0.771 41 H -0.179 1.179 42 H -0.181 1.181 43 H 0.248 0.752 44 H 0.093 0.907 45 H 0.105 0.895 Dipole moment (debyes) X Y Z Total from point charges -2.104 0.163 0.865 2.281 hybrid contribution -1.076 0.668 -0.927 1.570 sum -3.180 0.831 -0.063 3.288 Atomic orbital electron populations 1.23302 0.75968 1.03963 1.02676 1.86514 1.23778 1.33546 1.83995 1.23918 0.92415 0.81342 0.72191 1.90688 1.67375 1.36370 1.45155 1.21446 0.87199 1.00330 1.06161 1.21395 0.94210 0.93766 1.04017 1.22386 0.94754 0.97589 0.98024 0.88356 1.23400 0.97582 0.97224 0.99717 1.22504 0.97705 0.88697 0.89378 0.86751 1.46008 1.16463 1.32220 1.42806 1.20650 0.81754 0.86146 0.81728 1.90765 1.46096 1.39610 1.63407 1.20145 0.93560 0.98751 0.98908 1.19481 0.87273 1.01353 0.99670 1.20585 0.95452 1.02915 1.00806 1.20645 0.95365 1.02862 1.02277 1.20828 0.89842 1.03316 0.98460 1.24832 0.94993 0.88634 1.07541 1.86480 1.89845 1.22632 1.36258 0.94154 0.77294 0.78342 0.88242 1.41791 1.06192 1.36011 1.29020 1.23588 0.98337 1.00007 0.96853 0.87892 0.91786 0.91774 0.87455 0.87458 0.90699 0.90591 0.89289 0.90507 0.76410 0.86457 0.88235 0.84588 0.84066 0.87337 0.77120 1.17923 1.18089 0.75151 0.90729 0.89464 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.46 10.57 -39.25 -0.41 -0.87 16 3 C 0.46 0.62 7.96 36.01 0.29 0.91 16 4 O -0.51 -2.19 15.73 -18.75 -0.29 -2.48 16 5 C -0.11 0.23 5.80 -27.88 -0.16 0.07 16 6 C -0.10 0.19 4.34 -26.74 -0.12 0.07 16 7 C -0.11 0.31 3.65 -89.81 -0.33 -0.02 16 8 H 0.10 -0.32 8.13 -51.93 -0.42 -0.74 16 9 C -0.14 0.39 7.39 -25.93 -0.19 0.19 16 10 C 0.12 -0.15 4.24 -67.12 -0.28 -0.43 16 11 H 0.11 0.10 7.46 -51.93 -0.39 -0.28 16 12 N -0.72 1.26 5.35 -53.02 -0.28 0.98 16 13 C 0.51 0.46 7.82 -10.98 -0.09 0.37 16 14 O -0.52 -3.02 15.63 5.56 0.09 -2.94 16 15 C -0.07 0.12 6.24 -29.03 -0.18 -0.06 16 16 C 0.04 0.05 5.66 -81.79 -0.46 -0.41 16 17 C -0.17 -0.41 10.77 -39.78 -0.43 -0.84 16 18 C -0.19 -0.38 9.37 -39.78 -0.37 -0.75 16 19 C -0.01 -0.02 6.50 -81.79 -0.53 -0.55 16 20 C -0.05 -0.04 3.08 36.01 0.11 0.07 16 21 O -0.55 -0.35 12.88 -35.23 -0.45 -0.80 16 22 Si 0.72 -0.20 30.60 -169.99 -5.20 -5.40 16 23 N -0.54 -0.76 6.07 -5.44 -0.03 -0.80 16 24 C -0.15 0.30 7.43 -25.92 -0.19 0.11 16 25 H 0.10 -0.30 8.14 -51.93 -0.42 -0.72 16 26 H 0.06 -0.03 8.13 -51.93 -0.42 -0.46 16 27 H 0.06 -0.03 8.13 -51.94 -0.42 -0.46 16 28 H 0.11 -0.37 8.14 -51.93 -0.42 -0.79 16 29 H 0.11 -0.34 8.14 -51.92 -0.42 -0.76 16 30 H 0.07 -0.09 7.80 -51.93 -0.41 -0.49 16 31 H 0.08 -0.08 8.10 -51.93 -0.42 -0.50 16 32 H 0.09 -0.30 8.08 -51.93 -0.42 -0.72 16 33 H 0.08 -0.19 8.14 -51.92 -0.42 -0.62 16 34 H 0.40 -1.81 8.73 -40.82 -0.36 -2.17 16 35 H 0.12 -0.45 8.14 -51.93 -0.42 -0.87 16 36 H 0.10 -0.38 8.14 -51.93 -0.42 -0.81 16 37 H 0.14 0.16 8.06 -52.49 -0.42 -0.26 16 38 H 0.14 0.02 6.24 -52.49 -0.33 -0.31 16 39 H 0.11 0.15 7.96 -51.93 -0.41 -0.27 16 40 H 0.38 -1.18 8.70 45.56 0.40 -0.79 16 41 H -0.25 -0.67 7.11 56.52 0.40 -0.27 16 42 H -0.26 -0.64 7.11 56.52 0.40 -0.24 16 43 H 0.41 -0.07 8.96 -40.82 -0.37 -0.44 16 44 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 45 H 0.09 -0.20 7.90 -51.93 -0.41 -0.61 16 LS Contribution 381.23 15.07 5.75 5.75 Total: 0.00 -11.19 381.23 -9.68 -20.86 By element: Atomic # 1 Polarization: -7.12 SS G_CDS: -6.96 Total: -14.08 kcal Atomic # 6 Polarization: 1.65 SS G_CDS: -1.87 Total: -0.23 kcal Atomic # 7 Polarization: 0.50 SS G_CDS: -0.32 Total: 0.18 kcal Atomic # 8 Polarization: -6.01 SS G_CDS: -1.08 Total: -7.09 kcal Atomic # 14 Polarization: -0.20 SS G_CDS: -5.20 Total: -5.40 kcal Total LS contribution 5.75 Total: 5.75 kcal Total: -11.19 -9.68 -20.86 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14475074_14644196.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -72.421 kcal (2) G-P(sol) polarization free energy of solvation -11.186 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -83.606 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.678 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.864 kcal (6) G-S(sol) free energy of system = (1) + (5) -93.285 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds