Wall clock time and date at job start Sun Mar 7 2021 01:30:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45196 * 1 3 3 C 1.34224 * 117.00232 * 2 1 4 4 O 1.20824 * 120.00357 * 359.97438 * 3 2 1 5 5 C 1.50704 * 120.00154 * 179.97438 * 3 2 1 6 6 C 1.53002 * 109.47423 * 180.02562 * 5 3 2 7 7 C 1.52992 * 109.47262 * 180.02562 * 6 5 3 8 8 H 1.09004 * 112.90752 * 316.24761 * 7 6 5 9 9 C 1.53784 * 113.61673 * 87.50130 * 7 6 5 10 10 C 1.53778 * 87.08081 * 139.98135 * 9 7 6 11 11 H 1.09004 * 113.61886 * 89.12045 * 10 9 7 12 12 N 1.46504 * 113.61207 * 220.01967 * 10 9 7 13 13 C 1.34782 * 120.00014 * 252.49389 * 12 10 9 14 14 O 1.21283 * 119.99599 * 0.02562 * 13 12 10 15 15 C 1.50691 * 120.00122 * 180.02562 * 13 12 10 16 16 O 1.42894 * 109.47338 * 180.02562 * 15 13 12 17 17 C 1.35984 * 117.00215 * 180.02562 * 16 15 13 18 18 C 1.38679 * 119.99984 * 179.72851 * 17 16 15 19 19 C 1.50702 * 120.00136 * 359.97438 * 18 17 16 20 20 O 1.42898 * 109.46893 * 75.00116 * 19 18 17 21 21 Si 1.86302 * 109.47134 * 195.00364 * 19 18 17 22 22 C 1.38158 * 119.99710 * 179.74427 * 18 17 16 23 23 C 1.38674 * 120.00011 * 0.50569 * 22 18 17 24 24 O 1.35980 * 120.00199 * 179.74967 * 23 22 18 25 25 C 1.42898 * 117.00459 * 180.02562 * 24 23 22 26 26 C 1.38718 * 119.99973 * 359.76631 * 23 22 18 27 27 C 1.38111 * 120.00022 * 359.97438 * 26 23 22 28 28 C 1.53778 * 87.08449 * 334.56700 * 10 9 7 29 29 H 1.09002 * 109.46766 * 59.99822 * 1 2 3 30 30 H 1.08992 * 109.47327 * 180.02562 * 1 2 3 31 31 H 1.08997 * 109.46842 * 300.00716 * 1 2 3 32 32 H 1.09005 * 109.47343 * 60.00087 * 5 3 2 33 33 H 1.09003 * 109.47230 * 300.00286 * 5 3 2 34 34 H 1.08996 * 109.46995 * 59.99673 * 6 5 3 35 35 H 1.09007 * 109.46560 * 299.99898 * 6 5 3 36 36 H 1.08993 * 113.61313 * 254.52732 * 9 7 6 37 37 H 1.09000 * 113.61578 * 25.43464 * 9 7 6 38 38 H 0.97001 * 119.99776 * 72.50291 * 12 10 9 39 39 H 1.08997 * 109.47312 * 300.00577 * 15 13 12 40 40 H 1.09009 * 109.47249 * 59.99997 * 15 13 12 41 41 H 1.09008 * 109.46987 * 315.00077 * 19 18 17 42 42 H 0.96694 * 114.00153 * 60.00042 * 20 19 18 43 43 H 1.48498 * 110.00183 * 58.68087 * 21 19 18 44 44 H 1.48502 * 109.99593 * 179.97438 * 21 19 18 45 45 H 1.08006 * 119.99858 * 180.23008 * 22 18 17 46 46 H 1.09001 * 109.46806 * 299.99729 * 25 24 23 47 47 H 1.09000 * 109.46932 * 59.99497 * 25 24 23 48 48 H 1.08997 * 109.47157 * 179.97438 * 25 24 23 49 49 H 1.08002 * 119.99932 * 180.02562 * 26 23 22 50 50 H 1.08001 * 120.00017 * 180.02562 * 27 26 23 51 51 H 1.08998 * 113.61879 * 270.88747 * 28 10 9 52 52 H 1.08997 * 113.69304 * 139.98833 * 28 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5664 1.2748 0.0006 6 6 4.0003 2.7420 0.0011 7 6 5.5281 2.8220 0.0011 8 1 5.9898 2.1196 0.6951 9 6 6.1465 2.7934 -1.4067 10 6 7.1385 3.8568 -0.9070 11 1 8.0405 3.4374 -0.4612 12 7 7.4229 4.9031 -1.8923 13 6 8.6181 4.9361 -2.5144 14 8 9.4579 4.0992 -2.2588 15 6 8.9108 6.0126 -3.5274 16 8 10.2315 5.8349 -4.0433 17 6 10.6560 6.7298 -4.9750 18 6 11.9292 6.6190 -5.5132 19 6 12.8427 5.5073 -5.0651 20 8 12.4178 4.2759 -5.6524 21 14 14.5869 5.8823 -5.6018 22 6 12.3585 7.5251 -6.4637 23 6 11.5201 8.5515 -6.8719 24 8 11.9444 9.4463 -7.8037 25 6 11.0288 10.4780 -8.1769 26 6 10.2485 8.6655 -6.3294 27 6 9.8174 7.7566 -5.3831 28 6 6.0699 4.2559 0.1243 29 1 -0.3633 0.5139 -0.8900 30 1 -0.3633 -1.0276 0.0005 31 1 -0.3633 0.5139 0.8899 32 1 3.9565 0.7805 -0.8892 33 1 3.9558 0.7808 0.8908 34 1 3.6102 3.2359 0.8910 35 1 3.6108 3.2363 -0.8890 36 1 6.6158 1.8424 -1.6581 37 1 5.4752 3.1544 -2.1859 38 1 6.7510 5.5722 -2.0968 39 1 8.1908 5.9492 -4.3433 40 1 8.8348 6.9901 -3.0511 41 1 12.8070 5.4233 -3.9789 42 1 12.4245 4.2783 -6.6194 43 1 15.0292 7.1765 -5.0233 44 1 15.4977 4.7936 -5.1653 45 1 13.3488 7.4367 -6.8856 46 1 10.1257 10.0297 -8.5912 47 1 10.7707 11.0697 -7.2986 48 1 11.4917 11.1214 -8.9250 49 1 9.5953 9.4646 -6.6475 50 1 8.8272 7.8452 -4.9610 51 1 5.3776 5.0167 -0.2363 52 1 6.4761 4.4860 1.1093 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14475074_4974302.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:30:37 Heat of formation + Delta-G solvation = -171.135576 kcal Electronic energy + Delta-G solvation = -33897.673064 eV Core-core repulsion = 29024.029492 eV Total energy + Delta-G solvation = -4873.643573 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 380.181 amu Computer time = 1.18 seconds Orbital eigenvalues (eV) -41.79375 -41.52014 -41.11376 -40.14876 -39.31887 -38.03194 -37.54232 -36.82250 -35.22495 -33.46810 -32.76631 -31.07643 -29.67265 -28.96029 -28.07408 -26.92836 -26.64203 -26.54035 -24.05081 -23.00772 -22.39270 -21.74047 -21.46642 -20.73241 -19.57826 -18.77956 -18.56017 -18.40438 -17.66326 -17.60678 -17.51843 -17.47926 -17.20785 -17.01530 -16.70151 -16.36387 -16.02263 -15.86461 -15.66084 -15.46740 -15.14352 -15.10226 -14.68471 -14.52917 -14.24738 -14.13355 -13.96439 -13.93835 -13.61782 -13.59564 -13.51849 -13.37009 -13.10129 -13.02213 -12.80271 -12.60053 -12.41678 -12.25191 -12.05725 -11.92228 -11.78513 -11.74973 -11.73306 -11.46534 -11.40221 -11.32676 -10.80789 -10.24367 -10.11674 -10.09718 -8.77281 -4.91645 0.07241 0.39191 1.21467 1.40696 1.48906 1.51070 1.73204 1.76909 2.10371 2.26144 2.57135 2.60721 3.34181 3.35996 3.46741 3.55275 3.63175 3.66765 3.70580 3.72541 3.76946 3.82301 3.92822 4.00853 4.04008 4.08948 4.09250 4.14325 4.15374 4.17220 4.23598 4.34655 4.36433 4.45829 4.51613 4.53973 4.58561 4.59939 4.60861 4.65109 4.69677 4.76463 4.92359 4.96397 5.03208 5.07744 5.14853 5.20770 5.23298 5.41131 5.42277 5.47705 6.16159 6.34653 6.43585 6.74550 6.78205 7.12772 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.362 6.362 3 C 0.458 3.542 4 O -0.509 6.509 5 C -0.114 4.114 6 C -0.096 4.096 7 C -0.108 4.108 8 H 0.099 0.901 9 C -0.150 4.150 10 C 0.124 3.876 11 H 0.118 0.882 12 N -0.719 5.719 13 C 0.516 3.484 14 O -0.508 6.508 15 C 0.039 3.961 16 O -0.277 6.277 17 C 0.117 3.883 18 C -0.109 4.109 19 C -0.056 4.056 20 O -0.529 6.529 21 Si 0.681 3.319 22 C -0.107 4.107 23 C 0.099 3.901 24 O -0.315 6.315 25 C 0.026 3.974 26 C -0.161 4.161 27 C -0.171 4.171 28 C -0.140 4.140 29 H 0.063 0.937 30 H 0.103 0.897 31 H 0.063 0.937 32 H 0.107 0.893 33 H 0.108 0.892 34 H 0.076 0.924 35 H 0.074 0.926 36 H 0.076 0.924 37 H 0.087 0.913 38 H 0.402 0.598 39 H 0.093 0.907 40 H 0.092 0.908 41 H 0.117 0.883 42 H 0.374 0.626 43 H -0.256 1.256 44 H -0.252 1.252 45 H 0.145 0.855 46 H 0.056 0.944 47 H 0.055 0.945 48 H 0.103 0.897 49 H 0.135 0.865 50 H 0.133 0.867 51 H 0.089 0.911 52 H 0.078 0.922 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.447 2.947 -2.471 5.879 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.278 6.278 3 C 0.301 3.699 4 O -0.396 6.396 5 C -0.152 4.152 6 C -0.134 4.134 7 C -0.127 4.127 8 H 0.118 0.882 9 C -0.189 4.189 10 C 0.019 3.981 11 H 0.136 0.864 12 N -0.372 5.372 13 C 0.301 3.699 14 O -0.381 6.381 15 C -0.040 4.040 16 O -0.189 6.189 17 C 0.071 3.929 18 C -0.110 4.110 19 C -0.167 4.167 20 O -0.334 6.334 21 Si 0.583 3.417 22 C -0.125 4.125 23 C 0.054 3.946 24 O -0.228 6.228 25 C -0.069 4.069 26 C -0.180 4.180 27 C -0.190 4.190 28 C -0.179 4.179 29 H 0.082 0.918 30 H 0.121 0.879 31 H 0.082 0.918 32 H 0.126 0.874 33 H 0.126 0.874 34 H 0.095 0.905 35 H 0.093 0.907 36 H 0.094 0.906 37 H 0.106 0.894 38 H 0.237 0.763 39 H 0.111 0.889 40 H 0.109 0.891 41 H 0.134 0.866 42 H 0.220 0.780 43 H -0.181 1.181 44 H -0.177 1.177 45 H 0.162 0.838 46 H 0.075 0.925 47 H 0.074 0.926 48 H 0.121 0.879 49 H 0.152 0.848 50 H 0.151 0.849 51 H 0.107 0.893 52 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges -2.976 2.450 -1.417 4.107 hybrid contribution -1.742 0.851 0.335 1.967 sum -4.718 3.301 -1.082 5.859 Atomic orbital electron populations 1.23301 0.75970 1.03966 1.02668 1.86513 1.23775 1.33545 1.83985 1.23917 0.92416 0.81340 0.72180 1.90687 1.67392 1.36363 1.45178 1.21449 0.87198 1.00316 1.06197 1.21394 0.94167 0.93795 1.04023 1.22386 0.94789 0.97581 0.97975 0.88235 1.23606 0.98295 1.00045 0.96925 1.22558 0.97952 0.88402 0.89156 0.86440 1.45827 1.15958 1.32475 1.42955 1.20064 0.82332 0.85778 0.81768 1.90798 1.45735 1.38912 1.62686 1.22466 0.85464 0.98807 0.97311 1.86252 1.29825 1.49341 1.53520 1.18639 0.93302 0.89852 0.91094 1.19494 0.93799 0.99054 0.98646 1.24940 1.05931 0.84260 1.01521 1.86608 1.90208 1.31986 1.24579 0.95114 0.75006 0.80103 0.91505 1.20060 0.99813 0.94114 0.98508 1.18774 0.92928 0.91340 0.91597 1.86103 1.42566 1.39003 1.55172 1.23094 0.93860 0.89218 1.00694 1.21089 0.95778 1.01424 0.99722 1.21061 1.00389 0.96368 1.01137 1.23406 0.97463 0.97265 0.99718 0.91791 0.87887 0.91780 0.87441 0.87418 0.90547 0.90721 0.90564 0.89446 0.76346 0.88933 0.89059 0.86558 0.77961 1.18052 1.17700 0.83786 0.92546 0.92642 0.87909 0.84756 0.84929 0.89258 0.90315 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.46 10.56 -39.24 -0.41 -0.87 16 3 C 0.46 0.61 7.96 36.01 0.29 0.89 16 4 O -0.51 -2.16 15.73 -18.75 -0.29 -2.46 16 5 C -0.11 0.24 5.80 -27.88 -0.16 0.07 16 6 C -0.10 0.20 4.34 -26.73 -0.12 0.08 16 7 C -0.11 0.32 3.65 -89.81 -0.33 -0.01 16 8 H 0.10 -0.33 8.13 -51.93 -0.42 -0.76 16 9 C -0.15 0.30 7.43 -25.92 -0.19 0.11 16 10 C 0.12 -0.14 4.24 -67.12 -0.28 -0.43 16 11 H 0.12 0.10 7.47 -51.93 -0.39 -0.29 16 12 N -0.72 1.08 5.35 -53.02 -0.28 0.80 16 13 C 0.52 0.96 7.91 -10.99 -0.09 0.88 16 14 O -0.51 -3.59 16.10 -14.36 -0.23 -3.82 16 15 C 0.04 -0.01 5.22 36.00 0.19 0.18 16 16 O -0.28 -1.01 9.00 -39.60 -0.36 -1.36 16 17 C 0.12 0.28 6.66 -39.24 -0.26 0.02 16 18 C -0.11 -0.24 5.27 -104.49 -0.55 -0.79 16 19 C -0.06 -0.14 2.37 36.01 0.09 -0.06 16 20 O -0.53 -1.67 12.88 -35.23 -0.45 -2.12 16 21 Si 0.68 0.56 29.92 -169.99 -5.09 -4.53 16 22 C -0.11 -0.12 8.59 -39.45 -0.34 -0.46 16 23 C 0.10 0.12 6.69 -39.24 -0.26 -0.14 16 24 O -0.31 -0.31 10.50 -19.68 -0.21 -0.52 16 25 C 0.03 -0.06 9.81 101.05 0.99 0.93 16 26 C -0.16 0.01 9.03 -39.45 -0.36 -0.35 16 27 C -0.17 -0.02 9.03 -39.45 -0.36 -0.38 16 28 C -0.14 0.40 7.39 -25.92 -0.19 0.21 16 29 H 0.06 -0.03 8.13 -51.93 -0.42 -0.46 16 30 H 0.10 -0.30 8.14 -51.93 -0.42 -0.72 16 31 H 0.06 -0.03 8.13 -51.93 -0.42 -0.46 16 32 H 0.11 -0.34 8.14 -51.93 -0.42 -0.77 16 33 H 0.11 -0.38 8.14 -51.93 -0.42 -0.80 16 34 H 0.08 -0.09 8.10 -51.93 -0.42 -0.51 16 35 H 0.07 -0.10 7.80 -51.93 -0.41 -0.50 16 36 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 37 H 0.09 -0.20 7.89 -51.93 -0.41 -0.61 16 38 H 0.40 -1.86 8.73 -40.82 -0.36 -2.21 16 39 H 0.09 -0.26 7.66 -51.93 -0.40 -0.66 16 40 H 0.09 -0.27 7.66 -51.92 -0.40 -0.67 16 41 H 0.12 0.50 7.82 -51.92 -0.41 0.10 16 42 H 0.37 -0.50 8.70 45.56 0.40 -0.10 16 43 H -0.26 -0.80 7.11 56.52 0.40 -0.40 16 44 H -0.25 -0.98 7.11 56.52 0.40 -0.58 16 45 H 0.14 -0.11 5.14 -52.48 -0.27 -0.38 16 46 H 0.06 -0.19 7.66 -51.93 -0.40 -0.58 16 47 H 0.05 -0.17 7.66 -51.93 -0.40 -0.57 16 48 H 0.10 -0.38 8.14 -51.93 -0.42 -0.81 16 49 H 0.13 -0.31 6.29 -52.49 -0.33 -0.64 16 50 H 0.13 -0.35 6.29 -52.49 -0.33 -0.68 16 51 H 0.09 -0.32 8.08 -51.93 -0.42 -0.74 16 52 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 LS Contribution 432.40 15.07 6.52 6.52 Total: 0.00 -12.91 432.40 -9.61 -22.52 By element: Atomic # 1 Polarization: -8.01 SS G_CDS: -7.93 Total: -15.95 kcal Atomic # 6 Polarization: 2.67 SS G_CDS: -0.87 Total: 1.80 kcal Atomic # 7 Polarization: 1.08 SS G_CDS: -0.28 Total: 0.80 kcal Atomic # 8 Polarization: -9.20 SS G_CDS: -1.96 Total: -11.16 kcal Atomic # 14 Polarization: 0.56 SS G_CDS: -5.09 Total: -4.53 kcal Total LS contribution 6.52 Total: 6.52 kcal Total: -12.91 -9.61 -22.52 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14475074_4974302.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -148.616 kcal (2) G-P(sol) polarization free energy of solvation -12.908 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -161.525 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.611 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.519 kcal (6) G-S(sol) free energy of system = (1) + (5) -171.136 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.18 seconds