Wall clock time and date at job start Sun Mar 7 2021 01:30:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45196 * 1 3 3 C 1.34224 * 117.00232 * 2 1 4 4 O 1.20824 * 120.00357 * 359.97438 * 3 2 1 5 5 C 1.50704 * 120.00154 * 179.97438 * 3 2 1 6 6 C 1.53002 * 109.47423 * 180.02562 * 5 3 2 7 7 C 1.52992 * 109.47262 * 180.02562 * 6 5 3 8 8 H 1.09004 * 112.90752 * 316.24761 * 7 6 5 9 9 C 1.53784 * 113.61673 * 87.50130 * 7 6 5 10 10 C 1.53778 * 87.08081 * 139.98135 * 9 7 6 11 11 H 1.09004 * 113.61886 * 89.12045 * 10 9 7 12 12 N 1.46504 * 113.61207 * 220.01967 * 10 9 7 13 13 C 1.34782 * 120.00014 * 252.49389 * 12 10 9 14 14 O 1.21283 * 119.99599 * 0.02562 * 13 12 10 15 15 C 1.50691 * 120.00122 * 180.02562 * 13 12 10 16 16 O 1.42894 * 109.47338 * 180.02562 * 15 13 12 17 17 C 1.35984 * 117.00215 * 180.02562 * 16 15 13 18 18 C 1.38679 * 119.99984 * 179.72851 * 17 16 15 19 19 C 1.50702 * 120.00136 * 359.97438 * 18 17 16 20 20 O 1.42898 * 109.46893 * 75.00116 * 19 18 17 21 21 Si 1.86302 * 109.47134 * 195.00364 * 19 18 17 22 22 C 1.38158 * 119.99710 * 179.74427 * 18 17 16 23 23 C 1.38674 * 120.00011 * 0.50569 * 22 18 17 24 24 O 1.35980 * 120.00199 * 179.74967 * 23 22 18 25 25 C 1.42898 * 117.00459 * 180.02562 * 24 23 22 26 26 C 1.38718 * 119.99973 * 359.76631 * 23 22 18 27 27 C 1.38111 * 120.00022 * 359.97438 * 26 23 22 28 28 C 1.53778 * 87.08449 * 334.56700 * 10 9 7 29 29 H 1.09002 * 109.46766 * 59.99822 * 1 2 3 30 30 H 1.08992 * 109.47327 * 180.02562 * 1 2 3 31 31 H 1.08997 * 109.46842 * 300.00716 * 1 2 3 32 32 H 1.09005 * 109.47343 * 60.00087 * 5 3 2 33 33 H 1.09003 * 109.47230 * 300.00286 * 5 3 2 34 34 H 1.08996 * 109.46995 * 59.99673 * 6 5 3 35 35 H 1.09007 * 109.46560 * 299.99898 * 6 5 3 36 36 H 1.08993 * 113.61313 * 254.52732 * 9 7 6 37 37 H 1.09000 * 113.61578 * 25.43464 * 9 7 6 38 38 H 0.97001 * 119.99776 * 72.50291 * 12 10 9 39 39 H 1.08997 * 109.47312 * 300.00577 * 15 13 12 40 40 H 1.09009 * 109.47249 * 59.99997 * 15 13 12 41 41 H 1.09008 * 109.46987 * 315.00077 * 19 18 17 42 42 H 0.96694 * 114.00153 * 60.00042 * 20 19 18 43 43 H 1.48498 * 110.00183 * 58.68087 * 21 19 18 44 44 H 1.48502 * 109.99593 * 179.97438 * 21 19 18 45 45 H 1.08006 * 119.99858 * 180.23008 * 22 18 17 46 46 H 1.09001 * 109.46806 * 299.99729 * 25 24 23 47 47 H 1.09000 * 109.46932 * 59.99497 * 25 24 23 48 48 H 1.08997 * 109.47157 * 179.97438 * 25 24 23 49 49 H 1.08002 * 119.99932 * 180.02562 * 26 23 22 50 50 H 1.08001 * 120.00017 * 180.02562 * 27 26 23 51 51 H 1.08998 * 113.61879 * 270.88747 * 28 10 9 52 52 H 1.08997 * 113.69304 * 139.98833 * 28 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5664 1.2748 0.0006 6 6 4.0003 2.7420 0.0011 7 6 5.5281 2.8220 0.0011 8 1 5.9898 2.1196 0.6951 9 6 6.1465 2.7934 -1.4067 10 6 7.1385 3.8568 -0.9070 11 1 8.0405 3.4374 -0.4612 12 7 7.4229 4.9031 -1.8923 13 6 8.6181 4.9361 -2.5144 14 8 9.4579 4.0992 -2.2588 15 6 8.9108 6.0126 -3.5274 16 8 10.2315 5.8349 -4.0433 17 6 10.6560 6.7298 -4.9750 18 6 11.9292 6.6190 -5.5132 19 6 12.8427 5.5073 -5.0651 20 8 12.4178 4.2759 -5.6524 21 14 14.5869 5.8823 -5.6018 22 6 12.3585 7.5251 -6.4637 23 6 11.5201 8.5515 -6.8719 24 8 11.9444 9.4463 -7.8037 25 6 11.0288 10.4780 -8.1769 26 6 10.2485 8.6655 -6.3294 27 6 9.8174 7.7566 -5.3831 28 6 6.0699 4.2559 0.1243 29 1 -0.3633 0.5139 -0.8900 30 1 -0.3633 -1.0276 0.0005 31 1 -0.3633 0.5139 0.8899 32 1 3.9565 0.7805 -0.8892 33 1 3.9558 0.7808 0.8908 34 1 3.6102 3.2359 0.8910 35 1 3.6108 3.2363 -0.8890 36 1 6.6158 1.8424 -1.6581 37 1 5.4752 3.1544 -2.1859 38 1 6.7510 5.5722 -2.0968 39 1 8.1908 5.9492 -4.3433 40 1 8.8348 6.9901 -3.0511 41 1 12.8070 5.4233 -3.9789 42 1 12.4245 4.2783 -6.6194 43 1 15.0292 7.1765 -5.0233 44 1 15.4977 4.7936 -5.1653 45 1 13.3488 7.4367 -6.8856 46 1 10.1257 10.0297 -8.5912 47 1 10.7707 11.0697 -7.2986 48 1 11.4917 11.1214 -8.9250 49 1 9.5953 9.4646 -6.6475 50 1 8.8272 7.8452 -4.9610 51 1 5.3776 5.0167 -0.2363 52 1 6.4761 4.4860 1.1093 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14475074_4974302.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:30:36 Heat of formation + Delta-G solvation = -174.034994 kcal Electronic energy + Delta-G solvation = -33897.798793 eV Core-core repulsion = 29024.029492 eV Total energy + Delta-G solvation = -4873.769301 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 380.181 amu Computer time = 1.43 seconds Orbital eigenvalues (eV) -41.81868 -41.56912 -41.13745 -40.11575 -39.36060 -38.16249 -37.63889 -36.89767 -35.25954 -33.42845 -32.79359 -31.04897 -29.64775 -28.91354 -27.94973 -26.79629 -26.62350 -26.52495 -24.04343 -22.97356 -22.42121 -21.77516 -21.46295 -20.59613 -19.61003 -18.78356 -18.60889 -18.42104 -17.69752 -17.69378 -17.52920 -17.50469 -17.25519 -16.99947 -16.61466 -16.25851 -16.12468 -15.87108 -15.62806 -15.52719 -15.20556 -15.16731 -14.67669 -14.52739 -14.30060 -14.16022 -14.08728 -13.84025 -13.55433 -13.47423 -13.40001 -13.33146 -13.04297 -13.00181 -12.71689 -12.50081 -12.33962 -12.29718 -12.09298 -11.93706 -11.83586 -11.79794 -11.70556 -11.41736 -11.40200 -11.20265 -10.94055 -10.40742 -10.12258 -10.10409 -8.79445 -5.04275 0.06843 0.36104 1.14480 1.26634 1.41626 1.51547 1.62004 1.77920 1.93200 2.35803 2.55926 2.63465 3.46715 3.50187 3.51609 3.54770 3.71438 3.74258 3.76700 3.83000 3.84952 3.93468 4.06853 4.10629 4.13652 4.15289 4.24167 4.25386 4.26287 4.29822 4.40229 4.45365 4.46640 4.51723 4.63967 4.66699 4.69342 4.70062 4.78089 4.80422 4.87369 4.93259 4.98380 5.06206 5.08940 5.15519 5.22405 5.22962 5.32805 5.41197 5.43548 5.59830 6.18833 6.42092 6.49108 6.68370 6.80445 7.12148 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.369 6.369 3 C 0.456 3.544 4 O -0.544 6.544 5 C -0.111 4.111 6 C -0.090 4.090 7 C -0.098 4.098 8 H 0.106 0.894 9 C -0.146 4.146 10 C 0.113 3.887 11 H 0.092 0.908 12 N -0.700 5.700 13 C 0.512 3.488 14 O -0.572 6.572 15 C 0.035 3.965 16 O -0.312 6.312 17 C 0.097 3.903 18 C -0.125 4.125 19 C -0.067 4.067 20 O -0.552 6.552 21 Si 0.783 3.217 22 C -0.115 4.115 23 C 0.088 3.912 24 O -0.332 6.332 25 C 0.017 3.983 26 C -0.159 4.159 27 C -0.166 4.166 28 C -0.130 4.130 29 H 0.060 0.940 30 H 0.127 0.873 31 H 0.060 0.940 32 H 0.122 0.878 33 H 0.126 0.874 34 H 0.068 0.932 35 H 0.068 0.932 36 H 0.066 0.934 37 H 0.094 0.906 38 H 0.420 0.580 39 H 0.122 0.878 40 H 0.122 0.878 41 H 0.088 0.912 42 H 0.391 0.609 43 H -0.284 1.284 44 H -0.296 1.296 45 H 0.157 0.843 46 H 0.067 0.933 47 H 0.064 0.936 48 H 0.115 0.885 49 H 0.160 0.840 50 H 0.163 0.837 51 H 0.102 0.898 52 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.910 4.256 -3.283 7.989 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.286 6.286 3 C 0.301 3.699 4 O -0.434 6.434 5 C -0.148 4.148 6 C -0.127 4.127 7 C -0.117 4.117 8 H 0.124 0.876 9 C -0.185 4.185 10 C 0.008 3.992 11 H 0.110 0.890 12 N -0.354 5.354 13 C 0.298 3.702 14 O -0.451 6.451 15 C -0.043 4.043 16 O -0.225 6.225 17 C 0.051 3.949 18 C -0.126 4.126 19 C -0.176 4.176 20 O -0.359 6.359 21 Si 0.688 3.312 22 C -0.133 4.133 23 C 0.043 3.957 24 O -0.246 6.246 25 C -0.077 4.077 26 C -0.178 4.178 27 C -0.184 4.184 28 C -0.168 4.168 29 H 0.079 0.921 30 H 0.145 0.855 31 H 0.079 0.921 32 H 0.140 0.860 33 H 0.144 0.856 34 H 0.087 0.913 35 H 0.087 0.913 36 H 0.085 0.915 37 H 0.113 0.887 38 H 0.258 0.742 39 H 0.140 0.860 40 H 0.139 0.861 41 H 0.106 0.894 42 H 0.241 0.759 43 H -0.211 1.211 44 H -0.224 1.224 45 H 0.174 0.826 46 H 0.086 0.914 47 H 0.083 0.917 48 H 0.133 0.867 49 H 0.177 0.823 50 H 0.180 0.820 51 H 0.121 0.879 52 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges -4.520 3.780 -2.248 6.307 hybrid contribution -1.370 0.443 0.609 1.563 sum -5.890 4.223 -1.640 7.431 Atomic orbital electron populations 1.23488 0.75218 1.05482 1.02361 1.86517 1.24720 1.33610 1.83737 1.24574 0.93562 0.80806 0.70942 1.90667 1.68376 1.37365 1.47001 1.21571 0.84884 1.00647 1.07712 1.21314 0.94344 0.93718 1.03355 1.22318 0.94182 0.97798 0.97416 0.87571 1.23584 0.97970 0.99230 0.97696 1.22569 0.97516 0.89125 0.89976 0.88986 1.45726 1.15373 1.32442 1.41817 1.20590 0.82314 0.85494 0.81816 1.90770 1.47841 1.41513 1.64952 1.22719 0.84718 0.99084 0.97748 1.86209 1.31762 1.50364 1.54154 1.18893 0.93882 0.90617 0.91468 1.19517 0.94180 0.99321 0.99574 1.25099 1.07908 0.84468 1.00133 1.86549 1.90471 1.32575 1.26342 0.93990 0.71322 0.76093 0.89823 1.20178 1.00562 0.94139 0.98420 1.18958 0.93488 0.91410 0.91843 1.86080 1.43883 1.39574 1.55082 1.23345 0.94058 0.88805 1.01505 1.21404 0.95589 1.01743 0.99039 1.21364 1.01223 0.95187 1.00632 1.23376 0.96664 0.97620 0.99135 0.92115 0.85519 0.92119 0.85986 0.85607 0.91301 0.91336 0.91538 0.88716 0.74194 0.86016 0.86079 0.89423 0.75921 1.21102 1.22376 0.82595 0.91401 0.91727 0.86719 0.82269 0.81968 0.87931 0.90198 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 113.37 1.20 1.17 16 2 O -0.37 -0.92 10.56 -51.36 -0.54 -1.46 16 3 C 0.46 1.26 7.96 71.24 0.57 1.83 16 4 O -0.54 -4.98 15.73 21.97 0.35 -4.63 16 5 C -0.11 0.53 5.80 29.85 0.17 0.70 16 6 C -0.09 0.42 4.34 30.59 0.13 0.55 16 7 C -0.10 0.62 3.65 -10.27 -0.04 0.58 16 8 H 0.11 -0.77 8.13 -2.39 -0.02 -0.79 16 9 C -0.15 0.58 7.43 31.12 0.23 0.81 16 10 C 0.11 -0.20 4.24 45.51 0.19 0.00 16 11 H 0.09 0.36 7.47 -2.38 -0.02 0.34 16 12 N -0.70 2.14 5.35 -440.03 -2.36 -0.21 16 13 C 0.51 2.40 7.91 87.65 0.69 3.09 16 14 O -0.57 -9.71 16.10 16.00 0.26 -9.45 16 15 C 0.04 -0.04 5.22 71.23 0.37 0.33 16 16 O -0.31 -2.65 9.00 -74.34 -0.67 -3.32 16 17 C 0.10 0.50 6.66 22.49 0.15 0.65 16 18 C -0.12 -0.69 5.27 -19.78 -0.10 -0.80 16 19 C -0.07 -0.49 2.37 71.24 0.17 -0.32 16 20 O -0.55 -4.64 12.88 -148.98 -1.92 -6.56 16 21 Si 0.78 2.38 29.92 68.60 2.05 4.43 16 22 C -0.12 -0.30 8.59 22.35 0.19 -0.11 16 23 C 0.09 0.16 6.69 22.49 0.15 0.31 16 24 O -0.33 -0.39 10.50 -93.33 -0.98 -1.37 16 25 C 0.02 -0.11 9.81 113.37 1.11 1.01 16 26 C -0.16 0.27 9.03 22.35 0.20 0.47 16 27 C -0.17 0.19 9.03 22.35 0.20 0.40 16 28 C -0.13 0.82 7.39 31.12 0.23 1.05 16 29 H 0.06 -0.03 8.13 -2.39 -0.02 -0.05 16 30 H 0.13 -0.82 8.14 -2.39 -0.02 -0.84 16 31 H 0.06 -0.03 8.13 -2.39 -0.02 -0.05 16 32 H 0.12 -0.91 8.14 -2.38 -0.02 -0.93 16 33 H 0.13 -1.03 8.14 -2.39 -0.02 -1.05 16 34 H 0.07 -0.18 8.10 -2.39 -0.02 -0.20 16 35 H 0.07 -0.21 7.80 -2.38 -0.02 -0.23 16 36 H 0.07 -0.11 8.14 -2.39 -0.02 -0.13 16 37 H 0.09 -0.50 7.89 -2.39 -0.02 -0.52 16 38 H 0.42 -4.46 8.73 -92.71 -0.81 -5.27 16 39 H 0.12 -0.90 7.66 -2.39 -0.02 -0.92 16 40 H 0.12 -0.92 7.66 -2.38 -0.02 -0.93 16 41 H 0.09 1.09 7.82 -2.38 -0.02 1.07 16 42 H 0.39 -0.51 8.70 -74.06 -0.64 -1.15 16 43 H -0.28 -2.13 7.11 99.48 0.71 -1.42 16 44 H -0.30 -2.96 7.11 99.48 0.71 -2.25 16 45 H 0.16 -0.20 5.14 -2.91 -0.01 -0.21 16 46 H 0.07 -0.58 7.66 -2.39 -0.02 -0.60 16 47 H 0.06 -0.52 7.66 -2.39 -0.02 -0.54 16 48 H 0.11 -1.02 8.14 -2.39 -0.02 -1.04 16 49 H 0.16 -1.17 6.29 -2.91 -0.02 -1.19 16 50 H 0.16 -1.32 6.29 -2.91 -0.02 -1.34 16 51 H 0.10 -0.89 8.08 -2.39 -0.02 -0.91 16 52 H 0.08 -0.48 8.14 -2.39 -0.02 -0.50 16 Total: 0.00 -34.07 432.40 1.56 -32.51 By element: Atomic # 1 Polarization: -21.21 SS G_CDS: -0.45 Total: -21.66 kcal Atomic # 6 Polarization: 5.90 SS G_CDS: 5.82 Total: 11.73 kcal Atomic # 7 Polarization: 2.14 SS G_CDS: -2.36 Total: -0.21 kcal Atomic # 8 Polarization: -23.29 SS G_CDS: -3.51 Total: -26.79 kcal Atomic # 14 Polarization: 2.38 SS G_CDS: 2.05 Total: 4.43 kcal Total: -34.07 1.56 -32.51 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14475074_4974302.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -141.524 kcal (2) G-P(sol) polarization free energy of solvation -34.074 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -175.598 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.563 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.511 kcal (6) G-S(sol) free energy of system = (1) + (5) -174.035 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.43 seconds