Wall clock time and date at job start Sun Mar 7 2021 01:30:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45201 * 1 3 3 C 1.34233 * 116.99959 * 2 1 4 4 O 1.20829 * 119.99524 * 0.02562 * 3 2 1 5 5 C 1.50699 * 120.00015 * 179.97438 * 3 2 1 6 6 C 1.53003 * 109.46971 * 180.02562 * 5 3 2 7 7 C 1.52994 * 109.46905 * 180.02562 * 6 5 3 8 8 H 1.09002 * 112.90771 * 316.25047 * 7 6 5 9 9 C 1.53779 * 113.61529 * 87.50451 * 7 6 5 10 10 C 1.53779 * 87.08402 * 139.98073 * 9 7 6 11 11 H 1.08998 * 113.69354 * 89.12517 * 10 9 7 12 12 N 1.46501 * 113.61719 * 220.02087 * 10 9 7 13 13 C 1.34772 * 120.00042 * 252.49461 * 12 10 9 14 14 O 1.21280 * 120.00022 * 0.02562 * 13 12 10 15 15 C 1.50700 * 120.00036 * 179.97438 * 13 12 10 16 16 O 1.42902 * 109.47246 * 180.02562 * 15 13 12 17 17 C 1.35988 * 116.99996 * 180.02562 * 16 15 13 18 18 C 1.39158 * 120.07290 * 179.72681 * 17 16 15 19 19 O 1.36001 * 120.07253 * 359.97438 * 18 17 16 20 20 C 1.42894 * 116.99906 * 180.02562 * 19 18 17 21 21 C 1.38565 * 119.85192 * 179.72225 * 18 17 16 22 22 C 1.38243 * 120.00311 * 0.55215 * 21 18 17 23 23 C 1.50695 * 119.92898 * 179.74736 * 22 21 18 24 24 O 1.42904 * 109.47265 * 64.97453 * 23 22 21 25 25 Si 1.86294 * 109.47106 * 184.97634 * 23 22 21 26 26 C 1.38245 * 120.14271 * 359.72233 * 22 21 18 27 27 C 1.38245 * 120.14851 * 0.02562 * 26 22 21 28 28 C 1.53784 * 113.61233 * 185.00038 * 7 6 5 29 29 H 1.09007 * 109.46875 * 179.97438 * 1 2 3 30 30 H 1.09004 * 109.46968 * 299.99595 * 1 2 3 31 31 H 1.08994 * 109.47322 * 60.00248 * 1 2 3 32 32 H 1.09000 * 109.46716 * 60.00416 * 5 3 2 33 33 H 1.08994 * 109.47192 * 300.00453 * 5 3 2 34 34 H 1.08994 * 109.46694 * 60.00023 * 6 5 3 35 35 H 1.09001 * 109.46897 * 300.00387 * 6 5 3 36 36 H 1.09006 * 113.61307 * 25.43275 * 9 7 6 37 37 H 1.08999 * 113.69146 * 254.53761 * 9 7 6 38 38 H 0.97005 * 120.00129 * 72.49260 * 12 10 9 39 39 H 1.08999 * 109.47487 * 300.00623 * 15 13 12 40 40 H 1.09002 * 109.46807 * 60.00250 * 15 13 12 41 41 H 1.09004 * 109.46779 * 299.99539 * 20 19 18 42 42 H 1.08993 * 109.47537 * 59.99877 * 20 19 18 43 43 H 1.09004 * 109.46933 * 180.02562 * 20 19 18 44 44 H 1.08005 * 119.99699 * 180.27345 * 21 18 17 45 45 H 1.09002 * 109.47173 * 304.97792 * 23 22 21 46 46 H 0.96692 * 113.99627 * 60.00202 * 24 23 22 47 47 H 1.48507 * 110.00094 * 179.97438 * 25 23 22 48 48 H 1.48492 * 110.00184 * 301.31713 * 25 23 22 49 49 H 1.08009 * 119.92867 * 180.02562 * 26 22 21 50 50 H 1.08003 * 119.99949 * 180.02562 * 27 26 22 51 51 H 1.09004 * 113.61451 * 105.47254 * 28 7 6 52 52 H 1.08994 * 113.61477 * 334.56556 * 28 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4032 2.2093 0.0005 5 6 3.5663 1.2749 0.0006 6 6 4.0001 2.7422 0.0011 7 6 5.5279 2.8222 0.0011 8 1 5.9896 2.1199 0.6951 9 6 6.1463 2.7937 -1.4067 10 6 7.1383 3.8572 -0.9070 11 1 8.0408 3.4392 -0.4611 12 7 7.4226 4.9036 -1.8922 13 6 8.6177 4.9366 -2.5143 14 8 9.4576 4.0998 -2.2589 15 6 8.9099 6.0126 -3.5281 16 8 10.2308 5.8351 -4.0439 17 6 10.6548 6.7295 -4.9763 18 6 11.9322 6.6201 -5.5174 19 8 12.7595 5.6186 -5.1144 20 6 14.0564 5.5684 -5.7122 21 6 12.3575 7.5306 -6.4714 22 6 11.5177 8.5516 -6.8753 23 6 11.9841 9.5443 -7.9088 24 8 12.1902 8.8742 -9.1541 25 14 10.6931 10.8702 -8.1233 26 6 10.2507 8.6637 -6.3336 27 6 9.8182 7.7556 -5.3853 28 6 6.0696 4.2562 0.1244 29 1 -0.3633 -1.0277 -0.0005 30 1 -0.3633 0.5138 0.8901 31 1 -0.3633 0.5138 -0.8899 32 1 3.9563 0.7807 -0.8892 33 1 3.9557 0.7809 0.8907 34 1 3.6100 3.2359 0.8910 35 1 3.6106 3.2365 -0.8889 36 1 5.4749 3.1548 -2.1858 37 1 6.6159 1.8432 -1.6596 38 1 6.7507 5.5726 -2.0967 39 1 8.1900 5.9483 -4.3440 40 1 8.8336 6.9903 -3.0524 41 1 13.9548 5.4482 -6.7909 42 1 14.5911 6.4938 -5.4985 43 1 14.6123 4.7245 -5.3038 44 1 13.3469 7.4452 -6.8961 45 1 12.9196 9.9976 -7.5810 46 1 11.3977 8.4466 -9.5064 47 1 11.1413 11.8559 -9.1396 48 1 9.4041 10.2615 -8.5394 49 1 9.5973 9.4626 -6.6521 50 1 8.8278 7.8452 -4.9640 51 1 6.4772 4.4859 1.1089 52 1 5.3774 5.0170 -0.2362 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14475074_60476.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:30:50 Heat of formation + Delta-G solvation = -170.205919 kcal Electronic energy + Delta-G solvation = -33643.860826 eV Core-core repulsion = 28770.257566 eV Total energy + Delta-G solvation = -4873.603260 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 380.181 amu Computer time = 1.31 seconds Orbital eigenvalues (eV) -41.81017 -41.52096 -41.10809 -39.91679 -39.02415 -38.80897 -37.54416 -36.99210 -35.22445 -33.46836 -32.02908 -31.45708 -29.81441 -28.98630 -28.41864 -26.94197 -26.68376 -26.17275 -23.94234 -23.09086 -22.46779 -21.73716 -21.46789 -20.73453 -19.77517 -18.62726 -18.53552 -18.29902 -17.91002 -17.66244 -17.52502 -17.50859 -17.25642 -16.92383 -16.60437 -16.37667 -16.14333 -15.85840 -15.79597 -15.68954 -15.37673 -15.17363 -14.75216 -14.55636 -14.28588 -14.13347 -13.95548 -13.73655 -13.62841 -13.58889 -13.50699 -13.33354 -13.09148 -12.80223 -12.63450 -12.55440 -12.42543 -12.17825 -12.12913 -12.04922 -11.99809 -11.78460 -11.72998 -11.63598 -11.40090 -11.32598 -10.81212 -10.62807 -10.11255 -9.78541 -8.85631 -4.98886 0.17656 0.29985 1.21500 1.25349 1.46842 1.51179 1.56165 1.73202 1.93333 2.32228 2.56205 2.56537 3.33924 3.34590 3.36425 3.48296 3.62342 3.63564 3.69190 3.72667 3.77431 3.79615 3.93327 3.94596 4.01063 4.09370 4.12451 4.15312 4.23665 4.26067 4.29432 4.34082 4.36616 4.45959 4.52773 4.54101 4.57296 4.59034 4.60793 4.65537 4.70133 4.76824 4.92267 4.96665 5.00190 5.08070 5.10455 5.23571 5.37016 5.41523 5.46812 5.55978 5.97265 6.35434 6.37672 6.55264 6.74564 7.12922 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.362 6.362 3 C 0.458 3.542 4 O -0.508 6.508 5 C -0.114 4.114 6 C -0.096 4.096 7 C -0.108 4.108 8 H 0.099 0.901 9 C -0.150 4.150 10 C 0.124 3.876 11 H 0.118 0.882 12 N -0.718 5.718 13 C 0.516 3.484 14 O -0.510 6.510 15 C 0.038 3.962 16 O -0.277 6.277 17 C 0.105 3.895 18 C 0.107 3.893 19 O -0.302 6.302 20 C 0.025 3.975 21 C -0.146 4.146 22 C -0.113 4.113 23 C -0.073 4.073 24 O -0.530 6.530 25 Si 0.688 3.312 26 C -0.115 4.115 27 C -0.170 4.170 28 C -0.140 4.140 29 H 0.103 0.897 30 H 0.064 0.936 31 H 0.063 0.937 32 H 0.107 0.893 33 H 0.108 0.892 34 H 0.076 0.924 35 H 0.074 0.926 36 H 0.087 0.913 37 H 0.075 0.925 38 H 0.402 0.598 39 H 0.093 0.907 40 H 0.095 0.905 41 H 0.056 0.944 42 H 0.056 0.944 43 H 0.103 0.897 44 H 0.140 0.860 45 H 0.118 0.882 46 H 0.376 0.624 47 H -0.257 1.257 48 H -0.260 1.260 49 H 0.133 0.867 50 H 0.139 0.861 51 H 0.078 0.922 52 H 0.089 0.911 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.299 1.784 1.555 4.060 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.278 6.278 3 C 0.301 3.699 4 O -0.396 6.396 5 C -0.152 4.152 6 C -0.134 4.134 7 C -0.127 4.127 8 H 0.118 0.882 9 C -0.189 4.189 10 C 0.019 3.981 11 H 0.136 0.864 12 N -0.372 5.372 13 C 0.301 3.699 14 O -0.383 6.383 15 C -0.041 4.041 16 O -0.189 6.189 17 C 0.059 3.941 18 C 0.061 3.939 19 O -0.215 6.215 20 C -0.070 4.070 21 C -0.165 4.165 22 C -0.114 4.114 23 C -0.182 4.182 24 O -0.336 6.336 25 Si 0.589 3.411 26 C -0.133 4.133 27 C -0.189 4.189 28 C -0.178 4.178 29 H 0.121 0.879 30 H 0.082 0.918 31 H 0.082 0.918 32 H 0.125 0.875 33 H 0.126 0.874 34 H 0.095 0.905 35 H 0.093 0.907 36 H 0.105 0.895 37 H 0.094 0.906 38 H 0.237 0.763 39 H 0.111 0.889 40 H 0.113 0.887 41 H 0.075 0.925 42 H 0.075 0.925 43 H 0.121 0.879 44 H 0.158 0.842 45 H 0.136 0.864 46 H 0.224 0.776 47 H -0.182 1.182 48 H -0.185 1.185 49 H 0.150 0.850 50 H 0.157 0.843 51 H 0.097 0.903 52 H 0.108 0.892 Dipole moment (debyes) X Y Z Total from point charges -2.752 1.752 1.494 3.589 hybrid contribution -0.746 -0.394 -1.042 1.341 sum -3.498 1.358 0.452 3.780 Atomic orbital electron populations 1.23303 0.75972 1.03961 1.02671 1.86515 1.23773 1.33551 1.83993 1.23923 0.92422 0.81339 0.72185 1.90689 1.67376 1.36372 1.45165 1.21447 0.87189 1.00334 1.06183 1.21395 0.94179 0.93776 1.04038 1.22383 0.94778 0.97617 0.97949 0.88238 1.23608 0.98313 1.00036 0.96945 1.22564 0.97959 0.88394 0.89163 0.86417 1.45824 1.15935 1.32473 1.42939 1.20060 0.82311 0.85760 0.81771 1.90793 1.45726 1.38980 1.62786 1.22501 0.85238 0.99054 0.97340 1.86280 1.29999 1.49203 1.53417 1.18290 0.91715 0.91550 0.92537 1.18283 0.88963 0.90729 0.95928 1.86250 1.25500 1.46491 1.63230 1.23133 0.82081 1.03293 0.98527 1.20943 1.01525 0.95668 0.98342 1.19966 0.94322 0.97679 0.99422 1.25008 1.10293 0.99578 0.83363 1.86600 1.38646 1.72112 1.36279 0.94936 0.76515 0.80135 0.89521 1.20736 0.95566 0.99241 0.97709 1.20991 1.00220 0.96074 1.01568 1.23409 0.97448 0.97241 0.99736 0.87897 0.91763 0.91799 0.87463 0.87417 0.90530 0.90718 0.89453 0.90603 0.76291 0.88869 0.88710 0.92541 0.92495 0.87858 0.84206 0.86421 0.77619 1.18234 1.18490 0.85009 0.84317 0.90281 0.89222 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.42 10.57 -39.27 -0.41 -0.84 16 3 C 0.46 0.55 7.96 36.01 0.29 0.84 16 4 O -0.51 -2.10 15.73 -18.75 -0.29 -2.40 16 5 C -0.11 0.25 5.80 -27.88 -0.16 0.09 16 6 C -0.10 0.22 4.34 -26.73 -0.12 0.10 16 7 C -0.11 0.34 3.65 -89.81 -0.33 0.01 16 8 H 0.10 -0.36 8.13 -51.93 -0.42 -0.78 16 9 C -0.15 0.34 7.43 -25.92 -0.19 0.15 16 10 C 0.12 -0.18 4.24 -67.12 -0.28 -0.47 16 11 H 0.12 0.06 7.46 -51.93 -0.39 -0.33 16 12 N -0.72 1.33 5.35 -53.02 -0.28 1.05 16 13 C 0.52 0.81 7.91 -10.99 -0.09 0.72 16 14 O -0.51 -3.47 16.10 -14.35 -0.23 -3.70 16 15 C 0.04 -0.02 5.22 36.01 0.19 0.16 16 16 O -0.28 -1.08 9.45 -47.33 -0.45 -1.53 16 17 C 0.10 0.28 6.70 -39.12 -0.26 0.02 16 18 C 0.11 0.36 6.70 -39.12 -0.26 0.09 16 19 O -0.30 -1.32 10.28 -34.24 -0.35 -1.67 16 20 C 0.02 0.01 9.81 101.05 0.99 1.00 16 21 C -0.15 -0.22 8.67 -39.46 -0.34 -0.56 16 22 C -0.11 -0.04 5.35 -104.62 -0.56 -0.60 16 23 C -0.07 0.03 2.80 36.00 0.10 0.13 16 24 O -0.53 -0.58 12.83 -35.23 -0.45 -1.03 16 25 Si 0.69 -0.92 29.88 -169.99 -5.08 -6.00 16 26 C -0.11 0.07 8.66 -39.58 -0.34 -0.28 16 27 C -0.17 0.05 9.04 -39.46 -0.36 -0.31 16 28 C -0.14 0.44 7.39 -25.91 -0.19 0.25 16 29 H 0.10 -0.31 8.14 -51.92 -0.42 -0.73 16 30 H 0.06 -0.04 8.13 -51.93 -0.42 -0.46 16 31 H 0.06 -0.04 8.13 -51.93 -0.42 -0.46 16 32 H 0.11 -0.36 8.14 -51.93 -0.42 -0.78 16 33 H 0.11 -0.39 8.14 -51.93 -0.42 -0.82 16 34 H 0.08 -0.10 8.10 -51.93 -0.42 -0.52 16 35 H 0.07 -0.11 7.80 -51.93 -0.41 -0.52 16 36 H 0.09 -0.22 7.90 -51.93 -0.41 -0.63 16 37 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 38 H 0.40 -2.02 8.73 -40.82 -0.36 -2.38 16 39 H 0.09 -0.31 7.67 -51.93 -0.40 -0.71 16 40 H 0.10 -0.33 7.66 -51.93 -0.40 -0.73 16 41 H 0.06 -0.03 7.65 -51.93 -0.40 -0.43 16 42 H 0.06 -0.05 7.68 -51.93 -0.40 -0.45 16 43 H 0.10 -0.10 8.14 -51.93 -0.42 -0.53 16 44 H 0.14 0.06 6.30 -52.48 -0.33 -0.27 16 45 H 0.12 -0.13 7.96 -51.93 -0.41 -0.54 16 46 H 0.38 -0.61 8.70 45.56 0.40 -0.22 16 47 H -0.26 -0.53 7.11 56.52 0.40 -0.13 16 48 H -0.26 -0.10 7.00 56.52 0.40 0.30 16 49 H 0.13 -0.34 4.83 -52.48 -0.25 -0.59 16 50 H 0.14 -0.47 6.30 -52.48 -0.33 -0.80 16 51 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 52 H 0.09 -0.35 8.08 -51.93 -0.42 -0.77 16 LS Contribution 432.58 15.07 6.52 6.52 Total: 0.00 -12.86 432.58 -9.82 -22.67 By element: Atomic # 1 Polarization: -7.55 SS G_CDS: -7.93 Total: -15.47 kcal Atomic # 6 Polarization: 3.25 SS G_CDS: -0.85 Total: 2.40 kcal Atomic # 7 Polarization: 1.33 SS G_CDS: -0.28 Total: 1.05 kcal Atomic # 8 Polarization: -8.98 SS G_CDS: -2.19 Total: -11.17 kcal Atomic # 14 Polarization: -0.92 SS G_CDS: -5.08 Total: -6.00 kcal Total LS contribution 6.52 Total: 6.52 kcal Total: -12.86 -9.82 -22.67 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14475074_60476.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -147.532 kcal (2) G-P(sol) polarization free energy of solvation -12.856 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -160.388 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.818 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.674 kcal (6) G-S(sol) free energy of system = (1) + (5) -170.206 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.31 seconds