Wall clock time and date at job start Sun Mar 7 2021 01:31:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45207 * 1 3 3 C 1.34231 * 116.99501 * 2 1 4 4 O 1.20823 * 120.00380 * 359.97438 * 3 2 1 5 5 C 1.50699 * 119.99439 * 179.97438 * 3 2 1 6 6 C 1.53006 * 109.47050 * 179.97438 * 5 3 2 7 7 C 1.53003 * 109.47438 * 179.97438 * 6 5 3 8 8 H 1.09001 * 112.84908 * 316.20465 * 7 6 5 9 9 C 1.53780 * 113.68806 * 87.46336 * 7 6 5 10 10 C 1.53781 * 87.08105 * 139.99461 * 9 7 6 11 11 H 1.09000 * 113.68927 * 89.12950 * 10 9 7 12 12 N 1.46495 * 113.61637 * 220.02458 * 10 9 7 13 13 C 1.34778 * 119.99713 * 252.49657 * 12 10 9 14 14 O 1.21694 * 120.00063 * 359.97438 * 13 12 10 15 15 C 1.46686 * 120.00174 * 180.02562 * 13 12 10 16 16 C 1.37860 * 126.23588 * 179.97438 * 15 13 12 17 17 C 1.39833 * 107.08711 * 179.97438 * 16 15 13 18 18 C 1.35449 * 107.86312 * 0.02562 * 17 16 15 19 19 C 1.50707 * 125.56210 * 179.97438 * 18 17 16 20 20 O 1.42903 * 109.46442 * 245.02004 * 19 18 17 21 21 Si 1.86293 * 109.47256 * 5.01570 * 19 18 17 22 22 N 1.35526 * 108.87513 * 0.22151 * 18 17 16 23 23 C 1.53775 * 113.61564 * 185.00063 * 7 6 5 24 24 H 1.09001 * 109.47166 * 300.00125 * 1 2 3 25 25 H 1.08999 * 109.47045 * 60.00231 * 1 2 3 26 26 H 1.08997 * 109.46611 * 180.02562 * 1 2 3 27 27 H 1.09001 * 109.47324 * 60.00062 * 5 3 2 28 28 H 1.09000 * 109.47430 * 299.99732 * 5 3 2 29 29 H 1.09001 * 109.46749 * 60.00025 * 6 5 3 30 30 H 1.08995 * 109.47441 * 300.00082 * 6 5 3 31 31 H 1.09004 * 113.61199 * 25.44966 * 9 7 6 32 32 H 1.08997 * 113.62217 * 254.54697 * 9 7 6 33 33 H 0.97000 * 120.00477 * 72.49570 * 12 10 9 34 34 H 1.08005 * 126.46130 * 359.97438 * 16 15 13 35 35 H 1.08005 * 126.06901 * 179.97438 * 17 16 15 36 36 H 1.08999 * 109.47345 * 125.02074 * 19 18 17 37 37 H 0.96700 * 114.00311 * 60.00230 * 20 19 18 38 38 H 1.48506 * 109.99973 * 180.02562 * 21 19 18 39 39 H 1.48493 * 110.00375 * 301.32185 * 21 19 18 40 40 H 0.97002 * 125.68548 * 179.75275 * 22 18 17 41 41 H 1.09001 * 113.61055 * 105.38984 * 23 7 6 42 42 H 1.08993 * 113.69160 * 334.50103 * 23 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0614 1.1961 0.0000 4 8 1.4033 2.2094 -0.0005 5 6 3.5663 1.2749 0.0006 6 6 4.0001 2.7422 -0.0002 7 6 5.5280 2.8223 0.0011 8 1 5.9881 2.1210 0.6972 9 6 6.1495 2.7914 -1.4053 10 6 7.1405 3.8556 -0.9051 11 1 8.0420 3.4382 -0.4566 12 7 7.4270 4.9003 -1.8913 13 6 8.6235 4.9321 -2.5109 14 8 9.4660 4.0934 -2.2508 15 6 8.9107 5.9785 -3.4980 16 6 10.0846 6.1324 -4.2043 17 6 9.9247 7.2506 -5.0285 18 6 8.6835 7.7495 -4.8157 19 6 8.0952 8.9571 -5.4989 20 8 7.8670 9.9861 -4.5339 21 14 9.2801 9.5749 -6.7969 22 7 8.0590 6.9887 -3.8840 23 6 6.0696 4.2564 0.1232 24 1 -0.3633 0.5139 0.8900 25 1 -0.3633 0.5138 -0.8900 26 1 -0.3632 -1.0277 0.0005 27 1 3.9564 0.7806 -0.8891 28 1 3.9557 0.7810 0.8908 29 1 3.6100 3.2368 0.8893 30 1 3.6108 3.2357 -0.8906 31 1 5.4799 3.1512 -2.1865 32 1 6.6193 1.8399 -1.6543 33 1 6.7557 5.5691 -2.0985 34 1 10.9626 5.5072 -4.1342 35 1 10.6605 7.6467 -5.7127 36 1 7.1507 8.6842 -5.9694 37 1 8.6660 10.2790 -4.0747 38 1 8.7118 10.7662 -7.4776 39 1 10.5825 9.9203 -6.1728 40 1 7.1606 7.1309 -3.5469 41 1 6.4750 4.4875 1.1083 42 1 5.3790 5.0177 -0.2396 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14475074_6580494.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:31:04 Heat of formation + Delta-G solvation = -90.818560 kcal Electronic energy + Delta-G solvation = -24555.095675 eV Core-core repulsion = 20696.174761 eV Total energy + Delta-G solvation = -3858.920914 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 309.145 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -42.53443 -41.52229 -40.92365 -39.32355 -37.89264 -37.55267 -35.27905 -33.51487 -32.11798 -31.35471 -29.17694 -27.46601 -26.86938 -26.40361 -24.02815 -22.55535 -21.65928 -21.37495 -21.36410 -20.77491 -19.72198 -18.58554 -18.20602 -17.67106 -17.53062 -17.25481 -16.74044 -16.42666 -16.29003 -16.04665 -15.50552 -15.24348 -15.16240 -14.64024 -14.55222 -14.36201 -14.08822 -13.99646 -13.93399 -13.68039 -13.61710 -13.39979 -13.11019 -12.81255 -12.44910 -12.37070 -12.08380 -11.91668 -11.79322 -11.74511 -11.41905 -11.35505 -11.16170 -10.86609 -10.16679 -10.08543 -9.28088 -4.99347 0.35314 1.09320 1.20584 1.54958 1.57823 1.71078 1.81265 2.03255 2.13828 2.37066 3.18165 3.33634 3.35373 3.51951 3.60466 3.66891 3.71847 3.79693 3.99714 4.07906 4.14681 4.20390 4.22955 4.26226 4.35031 4.40208 4.44327 4.53638 4.56695 4.60064 4.67990 4.75013 4.90324 4.93581 5.00147 5.05383 5.09064 5.21800 5.40195 5.43719 5.59753 5.82039 6.18003 6.21879 6.41957 6.73673 7.11608 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.362 6.362 3 C 0.458 3.542 4 O -0.509 6.509 5 C -0.114 4.114 6 C -0.097 4.097 7 C -0.108 4.108 8 H 0.100 0.900 9 C -0.149 4.149 10 C 0.123 3.877 11 H 0.120 0.880 12 N -0.722 5.722 13 C 0.591 3.409 14 O -0.524 6.524 15 C -0.051 4.051 16 C -0.098 4.098 17 C -0.199 4.199 18 C 0.023 3.977 19 C -0.062 4.062 20 O -0.534 6.534 21 Si 0.718 3.282 22 N -0.524 5.524 23 C -0.142 4.142 24 H 0.063 0.937 25 H 0.063 0.937 26 H 0.103 0.897 27 H 0.107 0.893 28 H 0.108 0.892 29 H 0.076 0.924 30 H 0.074 0.926 31 H 0.086 0.914 32 H 0.076 0.924 33 H 0.395 0.605 34 H 0.153 0.847 35 H 0.151 0.849 36 H 0.119 0.881 37 H 0.380 0.620 38 H -0.256 1.256 39 H -0.255 1.255 40 H 0.416 0.584 41 H 0.079 0.921 42 H 0.087 0.913 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.493 -0.892 -1.285 2.163 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.278 6.278 3 C 0.301 3.699 4 O -0.396 6.396 5 C -0.151 4.151 6 C -0.134 4.134 7 C -0.126 4.126 8 H 0.118 0.882 9 C -0.188 4.188 10 C 0.018 3.982 11 H 0.138 0.862 12 N -0.373 5.373 13 C 0.379 3.621 14 O -0.400 6.400 15 C -0.165 4.165 16 C -0.124 4.124 17 C -0.224 4.224 18 C -0.095 4.095 19 C -0.171 4.171 20 O -0.341 6.341 21 Si 0.617 3.383 22 N -0.120 5.120 23 C -0.180 4.180 24 H 0.082 0.918 25 H 0.082 0.918 26 H 0.121 0.879 27 H 0.126 0.874 28 H 0.126 0.874 29 H 0.095 0.905 30 H 0.092 0.908 31 H 0.104 0.896 32 H 0.095 0.905 33 H 0.228 0.772 34 H 0.171 0.829 35 H 0.168 0.832 36 H 0.137 0.863 37 H 0.229 0.771 38 H -0.181 1.181 39 H -0.179 1.179 40 H 0.254 0.746 41 H 0.097 0.903 42 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges -1.379 -0.627 -1.468 2.109 hybrid contribution -1.034 0.824 1.223 1.801 sum -2.413 0.198 -0.245 2.433 Atomic orbital electron populations 1.23305 0.75961 1.03971 1.02671 1.86516 1.23780 1.33523 1.83988 1.23916 0.92416 0.81346 0.72189 1.90689 1.67383 1.36378 1.45164 1.21444 0.87211 1.00278 1.06199 1.21396 0.94191 0.93822 1.04007 1.22381 0.94771 0.97515 0.97979 0.88171 1.23598 0.98268 1.00045 0.96902 1.22573 0.97999 0.88422 0.89159 0.86245 1.45897 1.16021 1.32288 1.43063 1.17098 0.81947 0.83382 0.79712 1.90869 1.46341 1.38946 1.63809 1.20493 0.93932 0.95637 1.06415 1.21338 0.96718 0.98151 0.96222 1.20741 0.96365 0.99980 1.05312 1.21090 0.94637 0.97183 0.96543 1.24909 1.09551 0.85093 0.97551 1.86599 1.37281 1.54987 1.55206 0.94221 0.76626 0.85045 0.82385 1.41955 1.15135 1.22407 1.32520 1.23408 0.97481 0.97266 0.99821 0.91777 0.91793 0.87875 0.87441 0.87392 0.90548 0.90776 0.89578 0.90484 0.77159 0.82931 0.83158 0.86301 0.77124 1.18050 1.17896 0.74649 0.90276 0.89440 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 101.05 1.07 1.05 16 2 O -0.36 -0.45 10.57 -39.26 -0.41 -0.86 16 3 C 0.46 0.62 7.96 36.00 0.29 0.90 16 4 O -0.51 -2.21 15.73 -18.75 -0.29 -2.50 16 5 C -0.11 0.24 5.80 -27.88 -0.16 0.08 16 6 C -0.10 0.19 4.34 -26.73 -0.12 0.08 16 7 C -0.11 0.31 3.65 -89.81 -0.33 -0.01 16 8 H 0.10 -0.35 8.13 -51.93 -0.42 -0.77 16 9 C -0.15 0.30 7.43 -25.92 -0.19 0.11 16 10 C 0.12 -0.13 4.24 -67.12 -0.28 -0.41 16 11 H 0.12 0.07 7.46 -51.93 -0.39 -0.32 16 12 N -0.72 0.57 5.35 -54.32 -0.29 0.28 16 13 C 0.59 1.41 7.79 -12.85 -0.10 1.31 16 14 O -0.52 -3.21 16.48 5.19 0.09 -3.12 16 15 C -0.05 -0.07 7.06 -81.98 -0.58 -0.65 16 16 C -0.10 -0.15 10.65 -39.12 -0.42 -0.57 16 17 C -0.20 0.02 9.32 -39.98 -0.37 -0.35 16 18 C 0.02 -0.02 6.46 -81.95 -0.53 -0.55 16 19 C -0.06 0.11 3.08 36.01 0.11 0.22 16 20 O -0.53 0.22 12.88 -35.23 -0.45 -0.24 16 21 Si 0.72 -1.60 30.56 -169.99 -5.19 -6.80 16 22 N -0.52 0.52 5.99 -5.69 -0.03 0.48 16 23 C -0.14 0.37 7.39 -25.92 -0.19 0.18 16 24 H 0.06 -0.03 8.13 -51.93 -0.42 -0.46 16 25 H 0.06 -0.03 8.13 -51.93 -0.42 -0.45 16 26 H 0.10 -0.30 8.14 -51.93 -0.42 -0.72 16 27 H 0.11 -0.35 8.14 -51.93 -0.42 -0.77 16 28 H 0.11 -0.39 8.14 -51.93 -0.42 -0.81 16 29 H 0.08 -0.08 8.10 -51.93 -0.42 -0.50 16 30 H 0.07 -0.08 7.81 -51.93 -0.41 -0.49 16 31 H 0.09 -0.18 7.90 -51.93 -0.41 -0.59 16 32 H 0.08 -0.11 8.14 -51.93 -0.42 -0.54 16 33 H 0.39 -1.29 7.86 -40.82 -0.32 -1.61 16 34 H 0.15 0.21 8.06 -52.48 -0.42 -0.22 16 35 H 0.15 -0.29 6.19 -52.48 -0.32 -0.61 16 36 H 0.12 -0.33 7.96 -51.93 -0.41 -0.74 16 37 H 0.38 -1.07 8.70 45.56 0.40 -0.68 16 38 H -0.26 -0.25 7.11 56.52 0.40 0.15 16 39 H -0.25 0.03 7.11 56.52 0.40 0.43 16 40 H 0.42 -1.36 8.19 -40.82 -0.33 -1.69 16 41 H 0.08 -0.20 8.14 -51.93 -0.42 -0.63 16 42 H 0.09 -0.27 8.08 -51.93 -0.42 -0.69 16 LS Contribution 358.91 15.07 5.41 5.41 Total: 0.00 -9.65 358.91 -9.04 -18.69 By element: Atomic # 1 Polarization: -6.66 SS G_CDS: -6.04 Total: -12.71 kcal Atomic # 6 Polarization: 3.18 SS G_CDS: -1.81 Total: 1.37 kcal Atomic # 7 Polarization: 1.09 SS G_CDS: -0.32 Total: 0.76 kcal Atomic # 8 Polarization: -5.65 SS G_CDS: -1.08 Total: -6.73 kcal Atomic # 14 Polarization: -1.60 SS G_CDS: -5.19 Total: -6.80 kcal Total LS contribution 5.41 Total: 5.41 kcal Total: -9.65 -9.04 -18.69 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14475074_6580494.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -72.129 kcal (2) G-P(sol) polarization free energy of solvation -9.652 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -81.781 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.037 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.690 kcal (6) G-S(sol) free energy of system = (1) + (5) -90.819 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds