Wall clock time and date at job start Sun Mar 7 2021 01:31:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45202 * 1 3 3 C 1.34230 * 116.99836 * 2 1 4 4 O 1.20833 * 119.99930 * 359.97438 * 3 2 1 5 5 C 1.50697 * 120.00262 * 180.27336 * 3 2 1 6 6 C 1.52996 * 109.47491 * 179.72204 * 5 3 2 7 7 C 1.53003 * 109.47301 * 179.97438 * 6 5 3 8 8 H 1.08992 * 112.84639 * 316.19999 * 7 6 5 9 9 C 1.53788 * 113.61338 * 87.49918 * 7 6 5 10 10 C 1.53782 * 87.07903 * 139.98122 * 9 7 6 11 11 H 1.08996 * 113.68728 * 89.12834 * 10 9 7 12 12 N 1.46502 * 113.61342 * 220.01991 * 10 9 7 13 13 C 1.34783 * 119.99579 * 252.49742 * 12 10 9 14 14 O 1.21647 * 119.99837 * 0.02562 * 13 12 10 15 15 C 1.46985 * 119.99668 * 180.02562 * 13 12 10 16 16 C 1.35806 * 125.14312 * 180.02562 * 15 13 12 17 17 C 1.46251 * 106.09561 * 179.97438 * 16 15 13 18 18 C 1.39771 * 134.15516 * 180.02562 * 17 16 15 19 19 C 1.50693 * 120.09628 * 359.95264 * 18 17 16 20 20 O 1.42901 * 109.47115 * 74.99824 * 19 18 17 21 21 Si 1.86302 * 109.47497 * 194.99890 * 19 18 17 22 22 C 1.36633 * 119.81350 * 179.97438 * 18 17 16 23 23 C 1.38768 * 120.49486 * 0.02562 * 22 18 17 24 24 C 1.38265 * 120.67932 * 359.97438 * 23 22 18 25 25 O 1.35961 * 120.12361 * 179.97438 * 24 23 22 26 26 C 1.42902 * 116.99856 * 0.02562 * 25 24 23 27 27 C 1.39449 * 119.75290 * 0.02562 * 24 23 22 28 28 O 1.34777 * 133.23863 * 180.36663 * 27 24 23 29 29 C 1.53781 * 87.08310 * 334.56707 * 10 9 7 30 30 H 1.08998 * 109.47630 * 300.00638 * 1 2 3 31 31 H 1.09004 * 109.46770 * 60.01042 * 1 2 3 32 32 H 1.09001 * 109.46882 * 180.02562 * 1 2 3 33 33 H 1.09004 * 109.46801 * 299.72165 * 5 3 2 34 34 H 1.09000 * 109.47461 * 59.71633 * 5 3 2 35 35 H 1.09004 * 109.47066 * 299.99799 * 6 5 3 36 36 H 1.08994 * 109.47405 * 59.99969 * 6 5 3 37 37 H 1.09000 * 113.61377 * 254.53330 * 9 7 6 38 38 H 1.09005 * 113.61211 * 25.43743 * 9 7 6 39 39 H 0.96993 * 120.00021 * 72.50158 * 12 10 9 40 40 H 1.08007 * 126.94994 * 0.02562 * 16 15 13 41 41 H 1.09002 * 109.47460 * 315.00012 * 19 18 17 42 42 H 0.96710 * 114.00148 * 179.97438 * 20 19 18 43 43 H 1.48501 * 110.00158 * 178.67836 * 21 19 18 44 44 H 1.48496 * 110.00227 * 300.00240 * 21 19 18 45 45 H 1.08001 * 119.75512 * 179.97438 * 22 18 17 46 46 H 1.08002 * 119.66329 * 179.97438 * 23 22 18 47 47 H 1.09001 * 109.47477 * 300.00094 * 26 25 24 48 48 H 1.08995 * 109.47063 * 60.00195 * 26 25 24 49 49 H 1.09001 * 109.47215 * 180.02562 * 26 25 24 50 50 H 1.08994 * 113.61880 * 270.88570 * 29 10 9 51 51 H 1.09003 * 113.61410 * 139.97660 * 29 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4032 2.2094 -0.0005 5 6 3.5663 1.2750 -0.0062 6 6 4.0000 2.7422 -0.0119 7 6 5.5279 2.8223 -0.0176 8 1 5.9910 2.1225 0.6780 9 6 6.1413 2.7892 -1.4274 10 6 7.1350 3.8544 -0.9346 11 1 8.0391 3.4378 -0.4907 12 7 7.4158 4.8976 -1.9242 13 6 8.6088 4.9285 -2.5507 14 8 9.4521 4.0900 -2.2947 15 6 8.8907 5.9754 -3.5431 16 6 10.0524 6.1048 -4.2345 17 6 9.8824 7.2728 -5.0981 18 6 10.6956 7.9184 -6.0338 19 6 12.0833 7.4016 -6.3132 20 8 11.9993 6.2177 -7.1092 21 14 13.0562 8.6988 -7.2305 22 6 10.2289 9.0198 -6.6941 23 6 8.9528 9.5035 -6.4425 24 6 8.1312 8.8808 -5.5212 25 8 6.8831 9.3646 -5.2831 26 6 6.4839 10.5211 -6.0216 27 6 8.5879 7.7552 -4.8362 28 8 8.0322 6.9500 -3.9093 29 6 6.0700 4.2567 0.0992 30 1 -0.3634 0.5139 0.8899 31 1 -0.3633 0.5137 -0.8901 32 1 -0.3633 -1.0277 0.0005 33 1 3.9595 0.7833 0.8836 34 1 3.9525 0.7785 -0.8964 35 1 3.6067 3.2339 -0.9017 36 1 3.6139 3.2387 0.8782 37 1 6.6098 1.8374 -1.6775 38 1 5.4672 3.1478 -2.2054 39 1 6.7432 5.5659 -2.1285 40 1 10.9250 5.4724 -4.1618 41 1 12.5819 7.1717 -5.3716 42 1 12.8575 5.8294 -7.3284 43 1 14.4366 8.2137 -7.4841 44 1 12.3868 9.0212 -8.5163 45 1 10.8582 9.5182 -7.4166 46 1 8.5977 10.3754 -6.9718 47 1 7.1639 11.3445 -5.8029 48 1 6.5135 10.2991 -7.0883 49 1 5.4701 10.8021 -5.7365 50 1 5.3764 5.0162 -0.2614 51 1 6.4810 4.4894 1.0815 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14475074_6672420.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:31:08 Heat of formation + Delta-G solvation = -128.128385 kcal Electronic energy + Delta-G solvation = -35259.432095 eV Core-core repulsion = 30286.738792 eV Total energy + Delta-G solvation = -4972.693303 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 390.165 amu Computer time = 1.44 seconds Orbital eigenvalues (eV) -43.61154 -41.51598 -41.13408 -40.56990 -39.45746 -38.96903 -37.51734 -37.16898 -35.26875 -33.52886 -33.41223 -31.93530 -30.95429 -29.17188 -28.67020 -27.09642 -26.76125 -26.24185 -25.09909 -23.90743 -22.98292 -21.83730 -21.58760 -21.44854 -20.84178 -19.57698 -18.79812 -18.55606 -18.53592 -18.37919 -17.63315 -17.58928 -17.49136 -17.26695 -16.97297 -16.60329 -16.39361 -16.27390 -15.81247 -15.68105 -15.62517 -15.29567 -14.75513 -14.54046 -14.45060 -14.10190 -14.09539 -13.99989 -13.93487 -13.86448 -13.54950 -13.43389 -13.37436 -13.20230 -13.08074 -12.78128 -12.64778 -12.42200 -12.41135 -12.06500 -12.04920 -11.75620 -11.71817 -11.70030 -11.40698 -11.33718 -11.21348 -10.89658 -10.49629 -10.16455 -9.71048 -8.93718 -5.00959 -0.54020 0.17966 0.75675 1.21139 1.24807 1.34397 1.54141 1.75119 1.88741 2.01119 2.08989 2.11030 2.42026 3.21842 3.36273 3.38734 3.42442 3.59744 3.66752 3.69031 3.72356 3.76056 3.88426 3.99364 4.01154 4.05448 4.12284 4.13303 4.14002 4.17988 4.19440 4.26326 4.34857 4.40051 4.49131 4.49247 4.50968 4.55532 4.63062 4.64571 4.73240 4.80086 4.87543 4.93560 4.94761 4.97992 5.11160 5.11569 5.23920 5.30260 5.35686 5.44032 5.48325 5.68698 6.20396 6.38480 6.43005 6.77859 6.97423 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.362 6.362 3 C 0.458 3.542 4 O -0.508 6.508 5 C -0.114 4.114 6 C -0.097 4.097 7 C -0.108 4.108 8 H 0.100 0.900 9 C -0.150 4.150 10 C 0.120 3.880 11 H 0.121 0.879 12 N -0.707 5.707 13 C 0.604 3.396 14 O -0.511 6.511 15 C -0.025 4.025 16 C -0.104 4.104 17 C -0.083 4.083 18 C -0.051 4.051 19 C -0.075 4.075 20 O -0.533 6.533 21 Si 0.688 3.312 22 C -0.090 4.090 23 C -0.177 4.177 24 C 0.150 3.850 25 O -0.310 6.310 26 C 0.024 3.976 27 C 0.047 3.953 28 O -0.174 6.174 29 C -0.140 4.140 30 H 0.063 0.937 31 H 0.063 0.937 32 H 0.103 0.897 33 H 0.108 0.892 34 H 0.107 0.893 35 H 0.075 0.925 36 H 0.076 0.924 37 H 0.077 0.923 38 H 0.088 0.912 39 H 0.409 0.591 40 H 0.173 0.827 41 H 0.077 0.923 42 H 0.380 0.620 43 H -0.259 1.259 44 H -0.253 1.253 45 H 0.140 0.860 46 H 0.148 0.852 47 H 0.061 0.939 48 H 0.060 0.940 49 H 0.105 0.895 50 H 0.090 0.910 51 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.133 3.018 0.395 3.046 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.278 6.278 3 C 0.301 3.699 4 O -0.395 6.395 5 C -0.151 4.151 6 C -0.135 4.135 7 C -0.126 4.126 8 H 0.118 0.882 9 C -0.189 4.189 10 C 0.015 3.985 11 H 0.139 0.861 12 N -0.357 5.357 13 C 0.389 3.611 14 O -0.388 6.388 15 C -0.075 4.075 16 C -0.125 4.125 17 C -0.084 4.084 18 C -0.051 4.051 19 C -0.184 4.184 20 O -0.340 6.340 21 Si 0.589 3.411 22 C -0.108 4.108 23 C -0.196 4.196 24 C 0.104 3.896 25 O -0.224 6.224 26 C -0.071 4.071 27 C -0.002 4.002 28 O -0.075 6.075 29 C -0.178 4.178 30 H 0.082 0.918 31 H 0.082 0.918 32 H 0.121 0.879 33 H 0.126 0.874 34 H 0.125 0.875 35 H 0.093 0.907 36 H 0.095 0.905 37 H 0.095 0.905 38 H 0.107 0.893 39 H 0.245 0.755 40 H 0.190 0.810 41 H 0.095 0.905 42 H 0.228 0.772 43 H -0.184 1.184 44 H -0.178 1.178 45 H 0.157 0.843 46 H 0.166 0.834 47 H 0.080 0.920 48 H 0.078 0.922 49 H 0.123 0.877 50 H 0.109 0.891 51 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges -0.131 2.990 0.164 2.997 hybrid contribution -0.232 -0.642 -0.678 0.962 sum -0.363 2.348 -0.514 2.431 Atomic orbital electron populations 1.23301 0.75996 1.03938 1.02675 1.86513 1.23756 1.33560 1.84017 1.23925 0.92428 0.81338 0.72207 1.90693 1.67372 1.36363 1.45115 1.21443 0.87187 1.00323 1.06158 1.21403 0.94177 0.93781 1.04116 1.22383 0.94843 0.97560 0.97861 0.88162 1.23615 0.98305 0.99881 0.97058 1.22666 0.98250 0.88430 0.89124 0.86139 1.45925 1.15946 1.32260 1.41546 1.16654 0.82713 0.82311 0.79410 1.90906 1.46438 1.37865 1.63601 1.21981 0.90842 0.92826 1.01844 1.22696 0.98479 0.96606 0.94681 1.19401 0.93173 0.96454 0.99345 1.18335 0.94740 0.95589 0.96442 1.24780 0.98670 0.95160 0.99799 1.86624 1.34345 1.40527 1.72536 0.94979 0.77633 0.85360 0.83137 1.20525 0.95441 0.95965 0.98884 1.20954 0.94910 1.02942 1.00788 1.17729 0.85844 0.91059 0.94932 1.86170 1.27896 1.45257 1.63042 1.23190 1.01798 0.85806 0.96282 1.18733 0.92614 0.94023 0.94802 1.84050 1.40177 1.34467 1.48823 1.23411 0.97453 0.97320 0.99648 0.91778 0.91795 0.87910 0.87424 0.87457 0.90667 0.90500 0.90452 0.89338 0.75527 0.81005 0.90501 0.77197 1.18386 1.17760 0.84256 0.83406 0.92009 0.92151 0.87654 0.89124 0.90150 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.56 101.05 1.07 1.06 16 2 O -0.36 -0.56 10.57 -39.26 -0.41 -0.98 16 3 C 0.46 0.78 7.96 36.00 0.29 1.07 16 4 O -0.51 -2.40 15.73 -18.76 -0.30 -2.69 16 5 C -0.11 0.20 5.80 -27.89 -0.16 0.04 16 6 C -0.10 0.15 4.34 -26.73 -0.12 0.03 16 7 C -0.11 0.27 3.65 -89.80 -0.33 -0.05 16 8 H 0.10 -0.34 8.13 -51.93 -0.42 -0.76 16 9 C -0.15 0.22 7.43 -25.91 -0.19 0.03 16 10 C 0.12 -0.07 4.24 -67.12 -0.28 -0.35 16 11 H 0.12 0.05 7.46 -51.93 -0.39 -0.33 16 12 N -0.71 -0.40 5.35 -54.23 -0.29 -0.69 16 13 C 0.60 1.99 7.80 -12.71 -0.10 1.90 16 14 O -0.51 -3.03 16.42 5.24 0.09 -2.95 16 15 C -0.02 -0.09 7.07 -36.91 -0.26 -0.35 16 16 C -0.10 -0.35 10.68 -37.24 -0.40 -0.75 16 17 C -0.08 -0.28 6.16 -105.21 -0.65 -0.93 16 18 C -0.05 -0.10 5.30 -104.63 -0.55 -0.65 16 19 C -0.07 -0.02 2.70 36.00 0.10 0.07 16 20 O -0.53 -0.86 12.86 -35.23 -0.45 -1.31 16 21 Si 0.69 -0.85 30.20 -169.99 -5.13 -5.98 16 22 C -0.09 -0.05 8.62 -39.97 -0.34 -0.40 16 23 C -0.18 -0.04 9.03 -39.38 -0.36 -0.40 16 24 C 0.15 0.36 6.70 -39.12 -0.26 0.09 16 25 O -0.31 -0.59 10.50 -19.62 -0.21 -0.80 16 26 C 0.02 -0.05 9.81 101.05 0.99 0.94 16 27 C 0.05 0.18 7.35 -38.24 -0.28 -0.10 16 28 O -0.17 -0.66 10.28 2.63 0.03 -0.63 16 29 C -0.14 0.31 7.39 -25.92 -0.19 0.11 16 30 H 0.06 -0.02 8.13 -51.93 -0.42 -0.44 16 31 H 0.06 -0.01 8.13 -51.93 -0.42 -0.43 16 32 H 0.10 -0.27 8.14 -51.93 -0.42 -0.70 16 33 H 0.11 -0.36 8.14 -51.93 -0.42 -0.78 16 34 H 0.11 -0.31 8.14 -51.93 -0.42 -0.73 16 35 H 0.07 -0.04 7.80 -51.93 -0.41 -0.44 16 36 H 0.08 -0.05 8.10 -51.93 -0.42 -0.47 16 37 H 0.08 -0.09 8.14 -51.93 -0.42 -0.52 16 38 H 0.09 -0.11 7.90 -51.93 -0.41 -0.52 16 39 H 0.41 -0.33 8.44 -40.82 -0.34 -0.68 16 40 H 0.17 0.39 8.06 -52.48 -0.42 -0.04 16 41 H 0.08 -0.08 7.96 -51.93 -0.41 -0.49 16 42 H 0.38 -0.93 8.74 45.56 0.40 -0.54 16 43 H -0.26 -0.21 7.11 56.52 0.40 0.19 16 44 H -0.25 -0.30 6.75 56.52 0.38 0.08 16 45 H 0.14 -0.18 4.85 -52.49 -0.25 -0.44 16 46 H 0.15 -0.40 6.26 -52.49 -0.33 -0.73 16 47 H 0.06 -0.22 7.66 -51.93 -0.40 -0.62 16 48 H 0.06 -0.19 7.66 -51.93 -0.40 -0.59 16 49 H 0.11 -0.38 8.14 -51.93 -0.42 -0.80 16 50 H 0.09 -0.21 8.08 -51.93 -0.42 -0.63 16 51 H 0.08 -0.19 8.14 -51.93 -0.42 -0.62 16 LS Contribution 430.56 15.07 6.49 6.49 Total: 0.00 -10.78 430.56 -9.45 -20.23 By element: Atomic # 1 Polarization: -4.81 SS G_CDS: -7.22 Total: -12.04 kcal Atomic # 6 Polarization: 3.39 SS G_CDS: -2.04 Total: 1.35 kcal Atomic # 7 Polarization: -0.40 SS G_CDS: -0.29 Total: -0.69 kcal Atomic # 8 Polarization: -8.11 SS G_CDS: -1.26 Total: -9.36 kcal Atomic # 14 Polarization: -0.85 SS G_CDS: -5.13 Total: -5.98 kcal Total LS contribution 6.49 Total: 6.49 kcal Total: -10.78 -9.45 -20.23 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14475074_6672420.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -107.897 kcal (2) G-P(sol) polarization free energy of solvation -10.780 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -118.677 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.451 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.231 kcal (6) G-S(sol) free energy of system = (1) + (5) -128.128 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.44 seconds