Wall clock time and date at job start Sun Mar 7 2021 01:31:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45202 * 1 3 3 C 1.34223 * 117.00112 * 2 1 4 4 O 1.20829 * 120.00219 * 359.97438 * 3 2 1 5 5 C 1.50704 * 120.00204 * 180.02562 * 3 2 1 6 6 H 1.09006 * 109.47275 * 59.99396 * 5 3 2 7 7 C 1.52995 * 109.47437 * 179.97438 * 5 3 2 8 8 C 1.53003 * 109.47323 * 179.97438 * 7 5 3 9 9 C 1.53005 * 109.46729 * 300.00225 * 8 7 5 10 10 H 1.08996 * 109.47034 * 299.99296 * 9 8 7 11 11 N 1.46504 * 109.46790 * 180.02562 * 9 8 7 12 12 C 1.34776 * 120.00067 * 154.99957 * 11 9 8 13 13 O 1.21280 * 119.99842 * 359.97438 * 12 11 9 14 14 C 1.50694 * 119.99788 * 180.02562 * 12 11 9 15 15 C 1.53001 * 109.47324 * 65.00254 * 14 12 11 16 16 O 1.42898 * 109.47043 * 185.00039 * 14 12 11 17 17 C 1.35897 * 117.00184 * 155.32333 * 16 14 12 18 18 C 1.38730 * 120.05817 * 5.08490 * 17 16 14 19 19 C 1.38143 * 119.94425 * 179.74450 * 18 17 16 20 20 C 1.38259 * 120.05838 * 0.50662 * 19 18 17 21 21 C 1.50701 * 119.94863 * 179.74346 * 20 19 18 22 22 O 1.42898 * 109.47138 * 120.02009 * 21 20 19 23 23 Si 1.86309 * 109.46885 * 0.02562 * 21 20 19 24 24 C 1.38265 * 120.11278 * 359.76804 * 20 19 18 25 25 C 1.38144 * 120.05450 * 359.97438 * 24 20 19 26 26 C 1.52995 * 109.47077 * 60.00019 * 9 8 7 27 27 C 1.52994 * 109.47258 * 299.99602 * 26 9 8 28 28 H 1.08986 * 109.46869 * 60.00295 * 1 2 3 29 29 H 1.09006 * 109.46950 * 180.02562 * 1 2 3 30 30 H 1.09002 * 109.46602 * 299.99931 * 1 2 3 31 31 H 1.09006 * 109.46949 * 59.99726 * 7 5 3 32 32 H 1.08995 * 109.47270 * 300.00086 * 7 5 3 33 33 H 1.08990 * 109.46795 * 60.00125 * 8 7 5 34 34 H 1.08993 * 109.46864 * 180.02562 * 8 7 5 35 35 H 0.97000 * 119.99992 * 334.99817 * 11 9 8 36 36 H 1.09000 * 109.47206 * 304.99880 * 14 12 11 37 37 H 1.09003 * 109.47448 * 180.02562 * 15 14 12 38 38 H 1.09005 * 109.46747 * 299.99538 * 15 14 12 39 39 H 1.09000 * 109.47284 * 59.99674 * 15 14 12 40 40 H 1.08002 * 120.02494 * 359.97438 * 18 17 16 41 41 H 1.08003 * 119.97207 * 180.23086 * 19 18 17 42 42 H 1.09004 * 109.47453 * 240.02704 * 21 20 19 43 43 H 0.96698 * 114.00643 * 300.00266 * 22 21 20 44 44 H 1.48500 * 109.99783 * 179.97438 * 23 21 20 45 45 H 1.48505 * 109.99686 * 301.31685 * 23 21 20 46 46 H 1.08004 * 119.97568 * 179.97438 * 24 20 19 47 47 H 1.08001 * 120.03074 * 179.97438 * 25 24 20 48 48 H 1.08998 * 109.47461 * 60.00161 * 26 9 8 49 49 H 1.09004 * 109.46832 * 179.97438 * 26 9 8 50 50 H 1.08998 * 109.47249 * 180.02562 * 27 26 9 51 51 H 1.09000 * 109.47213 * 299.99864 * 27 26 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5664 1.2748 -0.0006 6 1 3.9558 0.7808 -0.8908 7 6 4.0002 2.7420 -0.0011 8 6 5.5282 2.8220 -0.0011 9 6 6.0751 2.1288 1.2485 10 1 5.6854 2.6233 2.1382 11 7 7.5381 2.2060 1.2489 12 6 8.2161 2.1402 2.4118 13 8 7.6150 2.0175 3.4580 14 6 9.7209 2.2202 2.4122 15 6 10.1584 3.6009 1.9191 16 8 10.2086 2.0117 3.7391 17 6 11.4783 1.5433 3.8633 18 6 12.2753 1.3894 2.7383 19 6 13.5673 0.9180 2.8678 20 6 14.0629 0.5898 4.1162 21 6 15.4708 0.0703 4.2540 22 8 16.2216 0.9468 5.0966 23 14 16.2701 -0.0106 2.5730 24 6 13.2687 0.7369 5.2384 25 6 11.9777 1.2129 5.1148 26 6 5.6412 0.6617 1.2489 27 6 4.1134 0.5817 1.2489 28 1 -0.3632 0.5137 -0.8899 29 1 -0.3633 -1.0277 0.0005 30 1 -0.3632 0.5138 0.8900 31 1 3.6108 3.2363 0.8889 32 1 3.6102 3.2359 -0.8910 33 1 5.9178 2.3276 -0.8908 34 1 5.8372 3.8673 -0.0010 35 1 8.0188 2.3045 0.4121 36 1 10.1257 1.4533 1.7517 37 1 11.2469 3.6586 1.9189 38 1 9.7864 3.7598 0.9069 39 1 9.7536 4.3677 2.5795 40 1 11.8872 1.6414 1.7624 41 1 14.1895 0.8015 1.9927 42 1 15.4488 -0.9266 4.6942 43 1 16.2830 1.8534 4.7659 44 1 17.6593 -0.5209 2.6953 45 1 15.4809 -0.8941 1.6774 46 1 13.6579 0.4795 6.2124 47 1 11.3576 1.3273 5.9916 48 1 6.0310 0.1672 0.3592 49 1 6.0312 0.1678 2.1389 50 1 3.8043 -0.4636 1.2496 51 1 3.7236 1.0760 2.1387 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14475160_10157680.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:31:41 Heat of formation + Delta-G solvation = -167.156444 kcal Electronic energy + Delta-G solvation = -32465.502344 eV Core-core repulsion = 27910.713512 eV Total energy + Delta-G solvation = -4554.788833 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 364.181 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -41.93743 -41.64928 -40.76922 -39.46046 -38.70304 -37.42723 -37.14137 -35.46713 -33.55801 -32.06678 -31.98040 -31.63513 -30.87224 -28.58894 -26.76657 -25.80235 -24.65919 -23.97667 -23.90076 -22.46845 -21.90539 -21.51003 -20.82970 -19.55245 -18.75869 -18.55026 -18.10231 -17.78896 -17.40476 -17.28739 -16.87141 -16.79536 -16.44750 -16.00924 -15.91655 -15.67231 -15.36382 -15.19952 -15.10856 -14.97041 -14.70494 -14.43953 -14.26982 -14.11957 -13.99412 -13.82541 -13.66027 -13.54813 -13.41683 -13.37720 -13.08472 -12.97198 -12.72787 -12.50270 -12.35492 -12.14756 -12.14498 -12.05495 -11.80458 -11.70706 -11.69670 -11.52386 -11.31484 -10.79769 -10.43250 -10.20901 -10.05452 -9.20497 -5.07426 0.27779 0.28595 1.18831 1.28108 1.42830 1.45930 1.59281 1.69838 1.94863 2.42434 2.65303 3.31509 3.38175 3.45141 3.46546 3.51730 3.61867 3.65477 3.70249 3.78904 3.81014 3.85989 3.93295 4.08249 4.13903 4.16892 4.18246 4.20731 4.23984 4.27005 4.27798 4.40235 4.46988 4.49572 4.50330 4.56836 4.63228 4.64767 4.80592 4.86052 4.87097 4.94173 4.95710 4.98214 5.09867 5.14924 5.15728 5.24345 5.32295 5.40788 5.49546 5.67893 6.21003 6.36392 6.57790 6.73288 7.06232 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.358 6.358 3 C 0.463 3.537 4 O -0.505 6.505 5 C -0.081 4.081 6 H 0.112 0.888 7 C -0.101 4.101 8 C -0.125 4.125 9 C 0.143 3.857 10 H 0.093 0.907 11 N -0.723 5.723 12 C 0.519 3.481 13 O -0.510 6.510 14 C 0.066 3.934 15 C -0.177 4.177 16 O -0.283 6.283 17 C 0.135 3.865 18 C -0.208 4.208 19 C -0.076 4.076 20 C -0.158 4.158 21 C -0.063 4.063 22 O -0.541 6.541 23 Si 0.687 3.313 24 C -0.051 4.051 25 C -0.146 4.146 26 C -0.128 4.128 27 C -0.108 4.108 28 H 0.064 0.936 29 H 0.103 0.897 30 H 0.064 0.936 31 H 0.078 0.922 32 H 0.081 0.919 33 H 0.074 0.926 34 H 0.079 0.921 35 H 0.401 0.599 36 H 0.100 0.900 37 H 0.079 0.921 38 H 0.079 0.921 39 H 0.077 0.923 40 H 0.133 0.867 41 H 0.129 0.871 42 H 0.113 0.887 43 H 0.379 0.621 44 H -0.255 1.255 45 H -0.259 1.259 46 H 0.134 0.866 47 H 0.135 0.865 48 H 0.071 0.929 49 H 0.076 0.924 50 H 0.083 0.917 51 H 0.073 0.927 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.578 0.844 -6.556 6.796 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.275 6.275 3 C 0.306 3.694 4 O -0.392 6.392 5 C -0.100 4.100 6 H 0.130 0.870 7 C -0.139 4.139 8 C -0.163 4.163 9 C 0.039 3.961 10 H 0.112 0.888 11 N -0.377 5.377 12 C 0.304 3.696 13 O -0.383 6.383 14 C 0.006 3.994 15 C -0.235 4.235 16 O -0.196 6.196 17 C 0.090 3.910 18 C -0.227 4.227 19 C -0.093 4.093 20 C -0.158 4.158 21 C -0.174 4.174 22 O -0.346 6.346 23 Si 0.589 3.411 24 C -0.069 4.069 25 C -0.165 4.165 26 C -0.167 4.167 27 C -0.147 4.147 28 H 0.082 0.918 29 H 0.121 0.879 30 H 0.083 0.917 31 H 0.096 0.904 32 H 0.099 0.901 33 H 0.092 0.908 34 H 0.098 0.902 35 H 0.236 0.764 36 H 0.117 0.883 37 H 0.098 0.902 38 H 0.098 0.902 39 H 0.096 0.904 40 H 0.151 0.849 41 H 0.146 0.854 42 H 0.130 0.870 43 H 0.226 0.774 44 H -0.180 1.180 45 H -0.184 1.184 46 H 0.152 0.848 47 H 0.153 0.847 48 H 0.089 0.911 49 H 0.095 0.905 50 H 0.102 0.898 51 H 0.092 0.908 Dipole moment (debyes) X Y Z Total from point charges 1.189 0.042 -5.868 5.988 hybrid contribution -0.392 -0.261 -0.258 0.537 sum 0.797 -0.218 -6.127 6.182 Atomic orbital electron populations 1.23318 0.75936 1.03994 1.02720 1.86503 1.23730 1.33365 1.83885 1.23787 0.92014 0.81421 0.72187 1.90694 1.67202 1.36369 1.44897 1.21173 0.87026 0.99507 1.02267 0.87027 1.21396 0.94501 0.93473 1.04562 1.21814 0.95474 1.01674 0.97300 1.21098 0.78631 0.96369 0.99987 0.88848 1.45918 1.07487 1.75609 1.08650 1.20083 0.88597 0.76728 0.84224 1.90782 1.69753 1.46589 1.31169 1.22204 0.92405 0.99994 0.84835 1.22357 1.03614 0.95183 1.02326 1.86233 1.26648 1.79520 1.27176 1.19086 0.83612 0.93838 0.94466 1.21200 0.95621 1.07827 0.98027 1.20781 0.95018 0.97068 0.96477 1.20246 0.97337 1.04608 0.93645 1.24976 0.90253 0.95814 1.06383 1.86501 1.73534 1.24147 1.50457 0.94822 0.79649 0.89960 0.76670 1.20857 0.91831 0.95374 0.98806 1.20549 0.96523 1.03651 0.95736 1.21928 0.95011 0.96357 1.03405 1.21494 0.95374 1.01683 0.96114 0.91758 0.87855 0.91738 0.90359 0.90080 0.90765 0.90222 0.76413 0.88266 0.90190 0.90173 0.90412 0.84931 0.85355 0.86993 0.77391 1.17998 1.18400 0.84787 0.84685 0.91074 0.90512 0.89843 0.90846 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 101.05 1.07 1.05 16 2 O -0.36 -0.43 10.47 -39.24 -0.41 -0.84 16 3 C 0.46 0.72 7.25 36.01 0.26 0.98 16 4 O -0.50 -2.28 15.73 -18.75 -0.29 -2.57 16 5 C -0.08 0.12 2.63 -91.77 -0.24 -0.12 16 6 H 0.11 -0.35 8.14 -51.93 -0.42 -0.78 16 7 C -0.10 0.18 4.49 -26.73 -0.12 0.06 16 8 C -0.12 0.45 5.39 -26.73 -0.14 0.30 16 9 C 0.14 -0.26 2.45 -67.93 -0.17 -0.43 16 10 H 0.09 0.05 7.58 -51.93 -0.39 -0.34 16 11 N -0.72 1.83 5.04 -53.81 -0.27 1.56 16 12 C 0.52 0.46 7.14 -10.99 -0.08 0.38 16 13 O -0.51 -2.95 16.17 -14.30 -0.23 -3.19 16 14 C 0.07 -0.06 2.64 -27.88 -0.07 -0.13 16 15 C -0.18 0.55 9.12 37.16 0.34 0.89 16 16 O -0.28 -0.72 9.34 -39.27 -0.37 -1.09 16 17 C 0.14 0.20 6.60 -39.21 -0.26 -0.06 16 18 C -0.21 0.13 8.24 -39.43 -0.32 -0.19 16 19 C -0.08 0.06 8.66 -39.61 -0.34 -0.28 16 20 C -0.16 -0.01 5.39 -104.60 -0.56 -0.57 16 21 C -0.06 0.02 2.82 36.01 0.10 0.12 16 22 O -0.54 -0.09 12.77 -35.23 -0.45 -0.54 16 23 Si 0.69 -0.93 29.78 -169.99 -5.06 -6.00 16 24 C -0.05 -0.04 9.60 -39.61 -0.38 -0.42 16 25 C -0.15 -0.24 9.99 -39.43 -0.39 -0.63 16 26 C -0.13 0.22 5.50 -26.74 -0.15 0.08 16 27 C -0.11 0.16 5.13 -26.73 -0.14 0.03 16 28 H 0.06 -0.04 8.13 -51.94 -0.42 -0.46 16 29 H 0.10 -0.30 8.14 -51.93 -0.42 -0.72 16 30 H 0.06 -0.02 8.13 -51.93 -0.42 -0.45 16 31 H 0.08 -0.03 8.10 -51.93 -0.42 -0.45 16 32 H 0.08 -0.11 8.10 -51.93 -0.42 -0.53 16 33 H 0.07 -0.37 8.14 -51.93 -0.42 -0.79 16 34 H 0.08 -0.30 8.14 -51.93 -0.42 -0.73 16 35 H 0.40 -2.28 8.39 -40.82 -0.34 -2.62 16 36 H 0.10 -0.32 6.31 -51.93 -0.33 -0.65 16 37 H 0.08 -0.28 6.91 -51.93 -0.36 -0.64 16 38 H 0.08 -0.45 7.93 -51.93 -0.41 -0.86 16 39 H 0.08 -0.11 8.14 -51.93 -0.42 -0.54 16 40 H 0.13 -0.42 5.43 -52.49 -0.29 -0.71 16 41 H 0.13 -0.37 4.87 -52.48 -0.26 -0.62 16 42 H 0.11 0.02 7.96 -51.93 -0.41 -0.39 16 43 H 0.38 -1.39 8.70 45.56 0.40 -1.00 16 44 H -0.25 -0.52 7.11 56.52 0.40 -0.12 16 45 H -0.26 -0.21 7.11 56.52 0.40 0.19 16 46 H 0.13 0.02 8.06 -52.48 -0.42 -0.41 16 47 H 0.14 0.17 8.06 -52.49 -0.42 -0.25 16 48 H 0.07 -0.21 8.14 -51.93 -0.42 -0.63 16 49 H 0.08 0.03 8.14 -51.93 -0.42 -0.40 16 50 H 0.08 -0.13 8.11 -51.93 -0.42 -0.55 16 51 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 LS Contribution 413.02 15.07 6.22 6.22 Total: 0.00 -10.90 413.02 -10.39 -21.30 By element: Atomic # 1 Polarization: -7.99 SS G_CDS: -7.92 Total: -15.91 kcal Atomic # 6 Polarization: 2.65 SS G_CDS: -1.60 Total: 1.05 kcal Atomic # 7 Polarization: 1.83 SS G_CDS: -0.27 Total: 1.56 kcal Atomic # 8 Polarization: -6.46 SS G_CDS: -1.75 Total: -8.22 kcal Atomic # 14 Polarization: -0.93 SS G_CDS: -5.06 Total: -6.00 kcal Total LS contribution 6.22 Total: 6.22 kcal Total: -10.90 -10.39 -21.30 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14475160_10157680.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -145.861 kcal (2) G-P(sol) polarization free energy of solvation -10.903 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -156.764 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.392 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.295 kcal (6) G-S(sol) free energy of system = (1) + (5) -167.156 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.19 seconds