Wall clock time and date at job start Sun Mar 7 2021 01:32:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45201 * 1 3 3 C 1.34225 * 116.99958 * 2 1 4 4 O 1.20830 * 120.00395 * 0.02562 * 3 2 1 5 5 C 1.50700 * 120.00149 * 180.02562 * 3 2 1 6 6 H 1.09004 * 109.47143 * 300.00203 * 5 3 2 7 7 C 1.52996 * 109.47133 * 60.00434 * 5 3 2 8 8 C 1.53005 * 109.47318 * 180.02562 * 7 5 3 9 9 C 1.53000 * 109.46822 * 299.99742 * 8 7 5 10 10 H 1.08997 * 109.47463 * 299.99945 * 9 8 7 11 11 N 1.46498 * 109.47024 * 180.02562 * 9 8 7 12 12 C 1.34772 * 120.00196 * 84.99801 * 11 9 8 13 13 O 1.21694 * 119.99959 * 0.02562 * 12 11 9 14 14 C 1.46677 * 120.00145 * 180.02562 * 12 11 9 15 15 C 1.37871 * 126.23537 * 180.02562 * 14 12 11 16 16 C 1.50701 * 126.45626 * 359.94542 * 15 14 12 17 17 C 1.39829 * 107.08889 * 179.97438 * 15 14 12 18 18 C 1.50696 * 126.06894 * 179.97438 * 17 15 14 19 19 O 1.42896 * 109.47250 * 54.76364 * 18 17 15 20 20 Si 1.86295 * 109.47299 * 294.76031 * 18 17 15 21 21 C 1.35454 * 107.86344 * 0.22453 * 17 15 14 22 22 C 1.50706 * 125.56485 * 179.77846 * 21 17 15 23 23 N 1.35534 * 108.87174 * 359.62833 * 21 17 15 24 24 C 1.53004 * 109.46951 * 59.99810 * 9 8 7 25 25 C 1.52991 * 109.47593 * 299.99946 * 24 9 8 26 26 H 1.08999 * 109.47235 * 59.99826 * 1 2 3 27 27 H 1.09000 * 109.46887 * 179.97438 * 1 2 3 28 28 H 1.09000 * 109.47218 * 299.99641 * 1 2 3 29 29 H 1.09004 * 109.46955 * 299.99832 * 7 5 3 30 30 H 1.08997 * 109.47357 * 59.99451 * 7 5 3 31 31 H 1.08991 * 109.47278 * 179.97438 * 8 7 5 32 32 H 1.09002 * 109.46846 * 59.99239 * 8 7 5 33 33 H 0.97004 * 119.99797 * 265.00306 * 11 9 8 34 34 H 1.08994 * 109.47711 * 270.03366 * 16 15 14 35 35 H 1.09000 * 109.46853 * 30.03375 * 16 15 14 36 36 H 1.09000 * 109.46921 * 150.03136 * 16 15 14 37 37 H 1.09004 * 109.47280 * 174.76576 * 18 17 15 38 38 H 0.96703 * 114.00273 * 179.97438 * 19 18 17 39 39 H 1.48498 * 109.99980 * 59.99905 * 20 18 17 40 40 H 1.48503 * 110.00464 * 181.31768 * 20 18 17 41 41 H 1.08998 * 109.47229 * 84.65546 * 22 21 17 42 42 H 1.08996 * 109.46794 * 204.66003 * 22 21 17 43 43 H 1.08999 * 109.46979 * 324.65255 * 22 21 17 44 44 H 0.97004 * 125.67688 * 180.17206 * 23 21 17 45 45 H 1.09004 * 109.47112 * 60.00139 * 24 9 8 46 46 H 1.09002 * 109.46534 * 179.97438 * 24 9 8 47 47 H 1.09000 * 109.47632 * 180.02562 * 25 24 9 48 48 H 1.09004 * 109.47049 * 300.00232 * 25 24 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2094 0.0005 5 6 3.5663 1.2749 -0.0006 6 1 3.9564 0.7805 0.8892 7 6 4.1129 0.5817 -1.2502 8 6 5.6408 0.6612 -1.2505 9 6 6.0751 2.1283 -1.2500 10 1 5.6853 2.6229 -2.1397 11 7 7.5381 2.2045 -1.2510 12 6 8.2156 2.1386 -2.4141 13 8 7.6120 2.0162 -3.4637 14 6 9.6804 2.2143 -2.4150 15 6 10.4986 2.1609 -3.5234 16 6 10.0564 2.0130 -4.9565 17 6 11.8160 2.2691 -3.0673 18 6 13.0553 2.2588 -3.9245 19 8 12.9498 3.2721 -4.9266 20 14 13.2318 0.5938 -4.7412 21 6 11.7807 2.3791 -1.7177 22 6 12.9819 2.5132 -0.8175 23 7 10.4886 2.3524 -1.3093 24 6 5.5284 2.8216 -0.0004 25 6 4.0006 2.7420 0.0000 26 1 -0.3633 0.5138 -0.8899 27 1 -0.3633 -1.0277 -0.0005 28 1 -0.3634 0.5138 0.8900 29 1 3.8038 -0.4636 -1.2503 30 1 3.7227 1.0759 -2.1399 31 1 6.0302 0.1670 -2.1405 32 1 6.0305 0.1667 -0.3607 33 1 8.0191 2.3024 -0.4143 34 1 10.0029 0.9550 -5.2130 35 1 9.0737 2.4675 -5.0822 36 1 10.7728 2.5097 -5.6108 37 1 13.9291 2.4527 -3.3023 38 1 13.7146 3.3234 -5.5161 39 1 12.0468 0.3174 -5.5924 40 1 14.4673 0.5601 -5.5644 41 1 13.2787 3.5605 -0.7612 42 1 12.7304 2.1526 0.1799 43 1 13.8053 1.9233 -1.2202 44 1 10.1843 2.4165 -0.3905 45 1 5.9182 2.3270 0.8894 46 1 5.8382 3.8666 0.0001 47 1 3.6112 3.2362 0.8900 48 1 3.6108 3.2366 -0.8898 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14475160_12297754.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:32:03 Heat of formation + Delta-G solvation = -125.037010 kcal Electronic energy + Delta-G solvation = -29663.424584 eV Core-core repulsion = 25491.944609 eV Total energy + Delta-G solvation = -4171.479975 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 337.177 amu Computer time = 0.93 seconds Orbital eigenvalues (eV) -42.58479 -41.73844 -40.54156 -38.87210 -37.72390 -37.39592 -35.41198 -33.68422 -33.13211 -32.00361 -31.21411 -29.19352 -28.65104 -27.30507 -26.34596 -24.57067 -23.93264 -22.43866 -21.79614 -21.12792 -20.50273 -19.91119 -19.22480 -18.54504 -18.34518 -17.80925 -17.42257 -17.17230 -16.71923 -16.29426 -15.98393 -15.49156 -15.31299 -15.15974 -15.10005 -14.92982 -14.59805 -14.30291 -14.13447 -13.99731 -13.95617 -13.76022 -13.69115 -13.62104 -13.38538 -13.18160 -13.06058 -13.02463 -12.69764 -12.49357 -12.45759 -12.32380 -12.30392 -11.78166 -11.69025 -11.65613 -11.47950 -11.28578 -10.83470 -10.61179 -10.14144 -9.36951 -8.89590 -4.83951 0.48958 1.21067 1.29700 1.61028 1.70178 1.76365 1.99889 2.08976 2.19496 2.45803 3.41960 3.46410 3.47653 3.60916 3.78712 3.81496 3.89349 3.97505 4.06358 4.11764 4.17094 4.17504 4.19395 4.24101 4.25791 4.30785 4.36737 4.47710 4.52122 4.53014 4.59200 4.65990 4.70679 4.83228 4.86680 4.89238 4.99509 5.02258 5.05716 5.13857 5.15911 5.19806 5.37227 5.42326 5.43487 5.52319 5.79260 6.00877 6.34062 6.50905 6.60891 6.75482 7.22753 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.358 6.358 3 C 0.463 3.537 4 O -0.505 6.505 5 C -0.081 4.081 6 H 0.111 0.889 7 C -0.108 4.108 8 C -0.127 4.127 9 C 0.144 3.856 10 H 0.094 0.906 11 N -0.731 5.731 12 C 0.593 3.407 13 O -0.521 6.521 14 C -0.068 4.068 15 C -0.041 4.041 16 C -0.098 4.098 17 C -0.169 4.169 18 C -0.030 4.030 19 O -0.533 6.533 20 Si 0.670 3.330 21 C 0.079 3.921 22 C -0.095 4.095 23 N -0.536 5.536 24 C -0.125 4.125 25 C -0.101 4.101 26 H 0.064 0.936 27 H 0.103 0.897 28 H 0.063 0.937 29 H 0.083 0.917 30 H 0.073 0.927 31 H 0.078 0.922 32 H 0.069 0.931 33 H 0.393 0.607 34 H 0.066 0.934 35 H 0.080 0.920 36 H 0.071 0.929 37 H 0.068 0.932 38 H 0.376 0.624 39 H -0.244 1.244 40 H -0.263 1.263 41 H 0.079 0.921 42 H 0.070 0.930 43 H 0.088 0.912 44 H 0.415 0.585 45 H 0.072 0.928 46 H 0.078 0.922 47 H 0.080 0.920 48 H 0.078 0.922 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.243 -2.876 6.438 8.229 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.275 6.275 3 C 0.306 3.694 4 O -0.392 6.392 5 C -0.100 4.100 6 H 0.129 0.871 7 C -0.147 4.147 8 C -0.166 4.166 9 C 0.040 3.960 10 H 0.112 0.888 11 N -0.382 5.382 12 C 0.381 3.619 13 O -0.397 6.397 14 C -0.179 4.179 15 C -0.049 4.049 16 C -0.155 4.155 17 C -0.175 4.175 18 C -0.141 4.141 19 O -0.339 6.339 20 Si 0.570 3.430 21 C -0.039 4.039 22 C -0.152 4.152 23 N -0.134 5.134 24 C -0.163 4.163 25 C -0.139 4.139 26 H 0.083 0.917 27 H 0.121 0.879 28 H 0.082 0.918 29 H 0.101 0.899 30 H 0.092 0.908 31 H 0.096 0.904 32 H 0.088 0.912 33 H 0.226 0.774 34 H 0.085 0.915 35 H 0.099 0.901 36 H 0.089 0.911 37 H 0.086 0.914 38 H 0.223 0.777 39 H -0.168 1.168 40 H -0.188 1.188 41 H 0.098 0.902 42 H 0.089 0.911 43 H 0.107 0.893 44 H 0.253 0.747 45 H 0.090 0.910 46 H 0.096 0.904 47 H 0.098 0.902 48 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges 2.907 -3.005 5.330 6.774 hybrid contribution 0.243 1.072 0.418 1.176 sum 3.151 -1.934 5.748 6.834 Atomic orbital electron populations 1.23315 0.75967 1.03976 1.02707 1.86504 1.23702 1.33360 1.83893 1.23791 0.92014 0.81414 0.72171 1.90693 1.67206 1.36374 1.44909 1.21170 0.87001 0.99486 1.02300 0.87084 1.21500 0.95469 1.01622 0.96060 1.21923 0.94863 0.96390 1.03399 1.21062 0.78821 0.96300 0.99839 0.88802 1.45932 1.07525 1.76182 1.08555 1.17000 0.84766 0.76216 0.83881 1.90842 1.68501 1.49424 1.30934 1.20022 0.90163 1.20735 0.86975 1.19736 0.91101 0.99440 0.94622 1.20506 1.02513 1.01944 0.90494 1.18331 0.93501 1.14028 0.91659 1.23893 0.96638 1.01208 0.92335 1.86628 1.46419 1.54624 1.46270 0.95085 0.80409 0.81682 0.85791 1.20174 0.85056 1.04656 0.94043 1.20499 0.93559 1.03559 0.97615 1.41744 1.05622 1.57603 1.08423 1.21816 0.95516 1.01609 0.97378 1.21388 0.94485 0.93490 1.04521 0.91747 0.87862 0.91781 0.89868 0.90838 0.90370 0.91246 0.77395 0.91529 0.90125 0.91061 0.91393 0.77692 1.16802 1.18799 0.90200 0.91105 0.89290 0.74706 0.90954 0.90378 0.90162 0.90348 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.56 101.05 1.07 1.05 16 2 O -0.36 -0.51 10.47 -39.24 -0.41 -0.93 16 3 C 0.46 0.88 7.26 36.01 0.26 1.14 16 4 O -0.50 -2.45 15.73 -18.75 -0.30 -2.75 16 5 C -0.08 0.08 2.63 -91.77 -0.24 -0.16 16 6 H 0.11 -0.30 8.14 -51.93 -0.42 -0.72 16 7 C -0.11 0.12 5.14 -26.73 -0.14 -0.02 16 8 C -0.13 0.14 5.49 -26.73 -0.15 0.00 16 9 C 0.14 -0.13 2.45 -67.93 -0.17 -0.29 16 10 H 0.09 0.13 7.57 -51.93 -0.39 -0.26 16 11 N -0.73 0.71 5.07 -55.12 -0.28 0.43 16 12 C 0.59 1.60 7.75 -12.86 -0.10 1.50 16 13 O -0.52 -3.25 14.46 5.19 0.08 -3.18 16 14 C -0.07 -0.15 7.06 -81.98 -0.58 -0.73 16 15 C -0.04 -0.15 5.87 -104.16 -0.61 -0.76 16 16 C -0.10 -0.45 8.19 36.01 0.30 -0.16 16 17 C -0.17 -0.29 4.49 -105.02 -0.47 -0.77 16 18 C -0.03 -0.01 2.76 36.00 0.10 0.09 16 19 O -0.53 -0.92 11.55 -35.23 -0.41 -1.32 16 20 Si 0.67 0.01 31.74 -169.99 -5.40 -5.38 16 21 C 0.08 -0.05 7.13 -81.95 -0.58 -0.63 16 22 C -0.09 0.36 9.89 36.01 0.36 0.72 16 23 N -0.54 0.65 5.99 -5.69 -0.03 0.62 16 24 C -0.13 0.33 5.39 -26.73 -0.14 0.19 16 25 C -0.10 0.11 4.50 -26.73 -0.12 -0.01 16 26 H 0.06 -0.01 8.13 -51.93 -0.42 -0.43 16 27 H 0.10 -0.28 8.14 -51.93 -0.42 -0.71 16 28 H 0.06 -0.02 8.13 -51.93 -0.42 -0.44 16 29 H 0.08 -0.10 8.11 -51.93 -0.42 -0.53 16 30 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 31 H 0.08 0.07 8.14 -51.93 -0.42 -0.36 16 32 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 33 H 0.39 -1.54 7.73 -40.82 -0.32 -1.85 16 34 H 0.07 0.30 7.50 -51.93 -0.39 -0.09 16 35 H 0.08 0.47 6.48 -51.93 -0.34 0.14 16 36 H 0.07 0.34 6.67 -51.93 -0.35 -0.01 16 37 H 0.07 -0.13 6.78 -51.93 -0.35 -0.48 16 38 H 0.38 -0.85 8.74 45.56 0.40 -0.45 16 39 H -0.24 -0.81 6.04 56.52 0.34 -0.47 16 40 H -0.26 -0.45 7.11 56.52 0.40 -0.05 16 41 H 0.08 -0.30 8.14 -51.93 -0.42 -0.72 16 42 H 0.07 -0.37 8.14 -51.93 -0.42 -0.80 16 43 H 0.09 -0.43 7.44 -51.93 -0.39 -0.82 16 44 H 0.42 -1.94 8.19 -40.82 -0.33 -2.28 16 45 H 0.07 -0.30 8.14 -51.93 -0.42 -0.72 16 46 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 47 H 0.08 -0.06 8.10 -51.93 -0.42 -0.48 16 48 H 0.08 0.02 8.10 -51.93 -0.42 -0.40 16 LS Contribution 385.69 15.07 5.81 5.81 Total: 0.00 -10.32 385.69 -9.78 -20.11 By element: Atomic # 1 Polarization: -6.95 SS G_CDS: -7.63 Total: -14.58 kcal Atomic # 6 Polarization: 2.39 SS G_CDS: -1.22 Total: 1.17 kcal Atomic # 7 Polarization: 1.36 SS G_CDS: -0.31 Total: 1.05 kcal Atomic # 8 Polarization: -7.14 SS G_CDS: -1.04 Total: -8.18 kcal Atomic # 14 Polarization: 0.01 SS G_CDS: -5.40 Total: -5.38 kcal Total LS contribution 5.81 Total: 5.81 kcal Total: -10.32 -9.78 -20.11 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14475160_12297754.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -104.931 kcal (2) G-P(sol) polarization free energy of solvation -10.323 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -115.254 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.783 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.106 kcal (6) G-S(sol) free energy of system = (1) + (5) -125.037 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.93 seconds