Wall clock time and date at job start Sun Mar 7 2021 01:32:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45194 * 1 3 3 C 1.34230 * 117.00147 * 2 1 4 4 O 1.20823 * 119.99937 * 359.97438 * 3 2 1 5 5 C 1.50701 * 120.00059 * 179.97438 * 3 2 1 6 6 H 1.09004 * 109.47185 * 300.00208 * 5 3 2 7 7 C 1.52999 * 109.47078 * 60.00052 * 5 3 2 8 8 C 1.53000 * 109.47064 * 179.97438 * 7 5 3 9 9 C 1.52995 * 109.47220 * 300.00189 * 8 7 5 10 10 H 1.09002 * 109.46735 * 299.99643 * 9 8 7 11 11 N 1.46497 * 109.46902 * 180.02562 * 9 8 7 12 12 C 1.34773 * 120.00352 * 84.99876 * 11 9 8 13 13 O 1.21565 * 120.00074 * 359.97438 * 12 11 9 14 14 C 1.47698 * 120.00077 * 179.97438 * 12 11 9 15 15 C 1.39824 * 120.16764 * 179.97438 * 14 12 11 16 16 F 1.35097 * 120.10721 * 0.02562 * 15 14 12 17 17 C 1.38318 * 119.77740 * 180.02562 * 15 14 12 18 18 C 1.38204 * 120.12093 * 359.97200 * 17 15 14 19 19 C 1.38462 * 120.33494 * 0.02562 * 18 17 15 20 20 C 1.50698 * 119.88516 * 180.02562 * 19 18 17 21 21 O 1.42905 * 109.47321 * 119.99514 * 20 19 18 22 22 Si 1.86295 * 109.47516 * 359.97438 * 20 19 18 23 23 C 1.37849 * 120.22144 * 0.28377 * 19 18 17 24 24 C 1.52994 * 109.47560 * 59.99828 * 9 8 7 25 25 C 1.53000 * 109.46994 * 300.00310 * 24 9 8 26 26 H 1.09003 * 109.47432 * 59.99852 * 1 2 3 27 27 H 1.08999 * 109.47147 * 180.02562 * 1 2 3 28 28 H 1.09002 * 109.47454 * 300.00264 * 1 2 3 29 29 H 1.09005 * 109.46929 * 300.00194 * 7 5 3 30 30 H 1.08995 * 109.47329 * 59.99543 * 7 5 3 31 31 H 1.08998 * 109.46535 * 179.97438 * 8 7 5 32 32 H 1.09004 * 109.47085 * 60.00226 * 8 7 5 33 33 H 0.97003 * 119.99982 * 264.99326 * 11 9 8 34 34 H 1.07999 * 119.94008 * 180.02562 * 17 15 14 35 35 H 1.07996 * 119.82879 * 180.02562 * 18 17 15 36 36 H 1.09001 * 109.47122 * 239.99613 * 20 19 18 37 37 H 0.96696 * 114.00036 * 299.99741 * 21 20 19 38 38 H 1.48504 * 110.00018 * 58.68178 * 22 20 19 39 39 H 1.48496 * 110.00262 * 180.02562 * 22 20 19 40 40 H 1.07999 * 120.05946 * 179.71015 * 23 19 18 41 41 H 1.08997 * 109.46834 * 59.99536 * 24 9 8 42 42 H 1.08996 * 109.47665 * 180.02562 * 24 9 8 43 43 H 1.09003 * 109.47149 * 179.97438 * 25 24 9 44 44 H 1.08996 * 109.47423 * 299.99465 * 25 24 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4519 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2748 0.0006 6 1 3.9557 0.7808 0.8908 7 6 4.1138 0.5810 -1.2483 8 6 5.6417 0.6616 -1.2480 9 6 6.0750 2.1289 -1.2484 10 1 5.6853 2.6226 -2.1387 11 7 7.5379 2.2060 -1.2488 12 6 8.2160 2.1397 -2.4116 13 8 7.6137 2.0154 -3.4602 14 6 9.6909 2.2180 -2.4119 15 6 10.3980 2.1490 -3.6163 16 9 9.7342 2.0108 -4.7848 17 6 11.7792 2.2226 -3.6071 18 6 12.4583 2.3645 -2.4119 19 6 11.7630 2.4334 -1.2164 20 6 12.5137 2.5887 0.0810 21 8 12.1060 3.7972 0.7255 22 14 14.3432 2.6552 -0.2641 23 6 10.3867 2.3550 -1.2087 24 6 5.5275 2.8228 0.0004 25 6 3.9996 2.7422 0.0001 26 1 -0.3634 0.5139 -0.8900 27 1 -0.3633 -1.0277 0.0005 28 1 -0.3634 0.5139 0.8900 29 1 3.8047 -0.4643 -1.2482 30 1 3.7244 1.0749 -2.1385 31 1 6.0317 0.1669 -2.1375 32 1 6.0314 0.1679 -0.3578 33 1 8.0186 2.3049 -0.4120 34 1 12.3279 2.1700 -4.5359 35 1 13.5367 2.4219 -2.4103 36 1 12.2973 1.7400 0.7298 37 1 12.2689 4.5953 0.2044 38 1 14.6476 3.7889 -1.1737 39 1 15.0948 2.8076 1.0075 40 1 9.8473 2.4044 -0.2744 41 1 5.9172 2.3291 0.8906 42 1 5.8358 3.8682 -0.0001 43 1 3.6096 3.2361 0.8901 44 1 3.6099 3.2358 -0.8900 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14475160_12335834.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:32:12 Heat of formation + Delta-G solvation = -174.777770 kcal Electronic energy + Delta-G solvation = -29237.234640 eV Core-core repulsion = 24842.418776 eV Total energy + Delta-G solvation = -4394.815864 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 338.141 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -49.86789 -41.81113 -41.31891 -40.23132 -38.94427 -37.71383 -37.38316 -35.40309 -33.06188 -32.41960 -31.98809 -30.91710 -28.56032 -26.77823 -25.82957 -24.54920 -23.92847 -23.06997 -21.87658 -21.56035 -20.86662 -19.33439 -18.55335 -18.43886 -18.29364 -17.85111 -17.55500 -17.32165 -16.85050 -16.83140 -16.34256 -16.19479 -15.92603 -15.74127 -15.37852 -15.21586 -14.94452 -14.90770 -14.53830 -14.37358 -14.22923 -13.94050 -13.72760 -13.66703 -13.38900 -13.24111 -13.04627 -12.89698 -12.67784 -12.45106 -12.41478 -12.30581 -11.86868 -11.77280 -11.66511 -11.47370 -11.30558 -11.05120 -10.73676 -10.43691 -10.12174 -9.87327 -5.11488 -0.53381 -0.13031 1.09221 1.22027 1.44216 1.64599 1.70695 1.82756 1.96139 2.46221 2.99450 3.13277 3.32605 3.37581 3.42765 3.45595 3.53801 3.64749 3.83793 3.86381 3.97309 3.98612 4.12546 4.18076 4.20285 4.23769 4.26340 4.29424 4.31973 4.43084 4.52716 4.60108 4.63652 4.67274 4.73439 4.83346 4.87091 4.91065 5.00071 5.01270 5.02852 5.15309 5.20324 5.38486 5.44168 5.51434 6.20245 6.35982 6.76392 7.12091 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.358 6.358 3 C 0.464 3.536 4 O -0.505 6.505 5 C -0.081 4.081 6 H 0.112 0.888 7 C -0.108 4.108 8 C -0.128 4.128 9 C 0.142 3.858 10 H 0.094 0.906 11 N -0.722 5.722 12 C 0.560 3.440 13 O -0.519 6.519 14 C -0.175 4.175 15 C 0.167 3.833 16 F -0.111 7.111 17 C -0.157 4.157 18 C -0.060 4.060 19 C -0.139 4.139 20 C -0.073 4.073 21 O -0.528 6.528 22 Si 0.684 3.316 23 C -0.031 4.031 24 C -0.126 4.126 25 C -0.101 4.101 26 H 0.064 0.936 27 H 0.103 0.897 28 H 0.063 0.937 29 H 0.083 0.917 30 H 0.073 0.927 31 H 0.077 0.923 32 H 0.070 0.930 33 H 0.400 0.600 34 H 0.150 0.850 35 H 0.142 0.858 36 H 0.123 0.877 37 H 0.378 0.622 38 H -0.257 1.257 39 H -0.254 1.254 40 H 0.139 0.861 41 H 0.074 0.926 42 H 0.079 0.921 43 H 0.080 0.920 44 H 0.078 0.922 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.281 -2.781 3.185 6.017 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.275 6.275 3 C 0.306 3.694 4 O -0.392 6.392 5 C -0.100 4.100 6 H 0.130 0.870 7 C -0.146 4.146 8 C -0.166 4.166 9 C 0.038 3.962 10 H 0.112 0.888 11 N -0.374 5.374 12 C 0.346 3.654 13 O -0.395 6.395 14 C -0.179 4.179 15 C 0.146 3.854 16 F -0.089 7.089 17 C -0.175 4.175 18 C -0.077 4.077 19 C -0.140 4.140 20 C -0.183 4.183 21 O -0.335 6.335 22 Si 0.584 3.416 23 C -0.050 4.050 24 C -0.163 4.163 25 C -0.139 4.139 26 H 0.082 0.918 27 H 0.121 0.879 28 H 0.082 0.918 29 H 0.102 0.898 30 H 0.091 0.909 31 H 0.096 0.904 32 H 0.089 0.911 33 H 0.236 0.764 34 H 0.168 0.832 35 H 0.159 0.841 36 H 0.141 0.859 37 H 0.226 0.774 38 H -0.182 1.182 39 H -0.179 1.179 40 H 0.157 0.843 41 H 0.092 0.908 42 H 0.097 0.903 43 H 0.099 0.901 44 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges 4.120 -2.521 2.902 5.635 hybrid contribution -0.708 1.103 0.241 1.332 sum 3.412 -1.418 3.143 4.851 Atomic orbital electron populations 1.23313 0.75982 1.03970 1.02702 1.86504 1.23692 1.33371 1.83898 1.23793 0.92015 0.81409 0.72165 1.90690 1.67200 1.36380 1.44909 1.21178 0.86993 0.99505 1.02312 0.87018 1.21497 0.95413 1.01640 0.96085 1.21925 0.94939 0.96325 1.03438 1.21094 0.78731 0.96391 0.99942 0.88838 1.45933 1.07507 1.75103 1.08830 1.17970 0.86407 0.76866 0.84129 1.90875 1.69631 1.47999 1.30946 1.20087 0.93974 1.10400 0.93450 1.17762 0.89919 0.96658 0.81013 1.91632 1.80723 1.91759 1.44736 1.21173 0.91911 1.04154 1.00308 1.21097 1.00113 0.95385 0.91154 1.20274 0.94248 1.03752 0.95700 1.25014 1.09553 0.90288 0.93415 1.86612 1.84515 1.15744 1.46612 0.95010 0.74456 0.90019 0.82083 1.21023 0.93604 0.93860 0.96499 1.21818 0.95475 1.01688 0.97368 1.21393 0.94495 0.93472 1.04523 0.91752 0.87867 0.91787 0.89839 0.90862 0.90448 0.91084 0.76438 0.83247 0.84068 0.85901 0.77408 1.18214 1.17870 0.84313 0.90778 0.90272 0.90113 0.90369 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.56 101.05 1.07 1.06 16 2 O -0.36 -0.54 10.47 -39.26 -0.41 -0.95 16 3 C 0.46 0.91 7.25 36.01 0.26 1.17 16 4 O -0.50 -2.48 15.73 -18.75 -0.29 -2.78 16 5 C -0.08 0.08 2.63 -91.77 -0.24 -0.17 16 6 H 0.11 -0.29 8.14 -51.93 -0.42 -0.71 16 7 C -0.11 0.11 5.14 -26.73 -0.14 -0.03 16 8 C -0.13 0.13 5.49 -26.73 -0.15 -0.01 16 9 C 0.14 -0.11 2.45 -67.94 -0.17 -0.28 16 10 H 0.09 0.13 7.58 -51.93 -0.39 -0.26 16 11 N -0.72 0.64 5.03 -54.81 -0.28 0.37 16 12 C 0.56 1.32 7.73 -12.40 -0.10 1.22 16 13 O -0.52 -3.34 15.00 5.31 0.08 -3.26 16 14 C -0.18 -0.14 5.88 -104.91 -0.62 -0.76 16 15 C 0.17 0.27 7.29 -38.96 -0.28 -0.01 16 16 F -0.11 -0.50 15.55 2.25 0.04 -0.46 16 17 C -0.16 0.19 10.01 -39.56 -0.40 -0.20 16 18 C -0.06 0.16 8.66 -39.51 -0.34 -0.18 16 19 C -0.14 0.34 5.38 -104.68 -0.56 -0.22 16 20 C -0.07 0.22 2.81 36.00 0.10 0.32 16 21 O -0.53 0.80 12.77 -35.23 -0.45 0.35 16 22 Si 0.68 -2.16 29.78 -169.99 -5.06 -7.22 16 23 C -0.03 0.06 9.10 -39.19 -0.36 -0.30 16 24 C -0.13 0.32 5.39 -26.73 -0.14 0.17 16 25 C -0.10 0.10 4.49 -26.73 -0.12 -0.02 16 26 H 0.06 -0.01 8.13 -51.93 -0.42 -0.43 16 27 H 0.10 -0.28 8.14 -51.93 -0.42 -0.70 16 28 H 0.06 -0.02 8.13 -51.93 -0.42 -0.44 16 29 H 0.08 -0.10 8.11 -51.93 -0.42 -0.52 16 30 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 31 H 0.08 0.07 8.14 -51.93 -0.42 -0.35 16 32 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 33 H 0.40 -1.41 6.64 -40.82 -0.27 -1.68 16 34 H 0.15 -0.46 8.06 -52.49 -0.42 -0.88 16 35 H 0.14 -0.68 4.86 -52.49 -0.25 -0.94 16 36 H 0.12 -0.48 7.96 -51.93 -0.41 -0.90 16 37 H 0.38 -1.52 8.70 45.56 0.40 -1.13 16 38 H -0.26 0.30 7.11 56.52 0.40 0.71 16 39 H -0.25 -0.13 7.11 56.52 0.40 0.27 16 40 H 0.14 -0.52 6.41 -52.49 -0.34 -0.86 16 41 H 0.07 -0.29 8.14 -51.93 -0.42 -0.71 16 42 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 43 H 0.08 -0.06 8.10 -51.93 -0.42 -0.48 16 44 H 0.08 0.02 8.10 -51.93 -0.42 -0.40 16 LS Contribution 366.58 15.07 5.52 5.52 Total: 0.00 -9.71 366.58 -9.00 -18.70 By element: Atomic # 1 Polarization: -6.08 SS G_CDS: -5.96 Total: -12.04 kcal Atomic # 6 Polarization: 3.95 SS G_CDS: -2.18 Total: 1.77 kcal Atomic # 7 Polarization: 0.64 SS G_CDS: -0.28 Total: 0.37 kcal Atomic # 8 Polarization: -5.56 SS G_CDS: -1.08 Total: -6.63 kcal Atomic # 9 Polarization: -0.50 SS G_CDS: 0.04 Total: -0.46 kcal Atomic # 14 Polarization: -2.16 SS G_CDS: -5.06 Total: -7.22 kcal Total LS contribution 5.52 Total: 5.52 kcal Total: -9.71 -9.00 -18.70 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14475160_12335834.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -156.077 kcal (2) G-P(sol) polarization free energy of solvation -9.705 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -165.782 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.995 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.701 kcal (6) G-S(sol) free energy of system = (1) + (5) -174.778 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds