Wall clock time and date at job start Sun Mar 7 2021 01:32:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45194 * 1 3 3 C 1.34230 * 117.00147 * 2 1 4 4 O 1.20823 * 119.99937 * 359.97438 * 3 2 1 5 5 C 1.50701 * 120.00059 * 179.97438 * 3 2 1 6 6 H 1.09004 * 109.47185 * 300.00208 * 5 3 2 7 7 C 1.52999 * 109.47078 * 60.00052 * 5 3 2 8 8 C 1.53000 * 109.47064 * 179.97438 * 7 5 3 9 9 C 1.52995 * 109.47220 * 300.00189 * 8 7 5 10 10 H 1.09002 * 109.46735 * 299.99643 * 9 8 7 11 11 N 1.46497 * 109.46902 * 180.02562 * 9 8 7 12 12 C 1.34773 * 120.00352 * 84.99876 * 11 9 8 13 13 O 1.21565 * 120.00074 * 359.97438 * 12 11 9 14 14 C 1.47698 * 120.00077 * 179.97438 * 12 11 9 15 15 C 1.39824 * 120.16764 * 179.97438 * 14 12 11 16 16 F 1.35097 * 120.10721 * 0.02562 * 15 14 12 17 17 C 1.38318 * 119.77740 * 180.02562 * 15 14 12 18 18 C 1.38204 * 120.12093 * 359.97200 * 17 15 14 19 19 C 1.38462 * 120.33494 * 0.02562 * 18 17 15 20 20 C 1.50698 * 119.88516 * 180.02562 * 19 18 17 21 21 O 1.42905 * 109.47321 * 119.99514 * 20 19 18 22 22 Si 1.86295 * 109.47516 * 359.97438 * 20 19 18 23 23 C 1.37849 * 120.22144 * 0.28377 * 19 18 17 24 24 C 1.52994 * 109.47560 * 59.99828 * 9 8 7 25 25 C 1.53000 * 109.46994 * 300.00310 * 24 9 8 26 26 H 1.09003 * 109.47432 * 59.99852 * 1 2 3 27 27 H 1.08999 * 109.47147 * 180.02562 * 1 2 3 28 28 H 1.09002 * 109.47454 * 300.00264 * 1 2 3 29 29 H 1.09005 * 109.46929 * 300.00194 * 7 5 3 30 30 H 1.08995 * 109.47329 * 59.99543 * 7 5 3 31 31 H 1.08998 * 109.46535 * 179.97438 * 8 7 5 32 32 H 1.09004 * 109.47085 * 60.00226 * 8 7 5 33 33 H 0.97003 * 119.99982 * 264.99326 * 11 9 8 34 34 H 1.07999 * 119.94008 * 180.02562 * 17 15 14 35 35 H 1.07996 * 119.82879 * 180.02562 * 18 17 15 36 36 H 1.09001 * 109.47122 * 239.99613 * 20 19 18 37 37 H 0.96696 * 114.00036 * 299.99741 * 21 20 19 38 38 H 1.48504 * 110.00018 * 58.68178 * 22 20 19 39 39 H 1.48496 * 110.00262 * 180.02562 * 22 20 19 40 40 H 1.07999 * 120.05946 * 179.71015 * 23 19 18 41 41 H 1.08997 * 109.46834 * 59.99536 * 24 9 8 42 42 H 1.08996 * 109.47665 * 180.02562 * 24 9 8 43 43 H 1.09003 * 109.47149 * 179.97438 * 25 24 9 44 44 H 1.08996 * 109.47423 * 299.99465 * 25 24 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4519 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2748 0.0006 6 1 3.9557 0.7808 0.8908 7 6 4.1138 0.5810 -1.2483 8 6 5.6417 0.6616 -1.2480 9 6 6.0750 2.1289 -1.2484 10 1 5.6853 2.6226 -2.1387 11 7 7.5379 2.2060 -1.2488 12 6 8.2160 2.1397 -2.4116 13 8 7.6137 2.0154 -3.4602 14 6 9.6909 2.2180 -2.4119 15 6 10.3980 2.1490 -3.6163 16 9 9.7342 2.0108 -4.7848 17 6 11.7792 2.2226 -3.6071 18 6 12.4583 2.3645 -2.4119 19 6 11.7630 2.4334 -1.2164 20 6 12.5137 2.5887 0.0810 21 8 12.1060 3.7972 0.7255 22 14 14.3432 2.6552 -0.2641 23 6 10.3867 2.3550 -1.2087 24 6 5.5275 2.8228 0.0004 25 6 3.9996 2.7422 0.0001 26 1 -0.3634 0.5139 -0.8900 27 1 -0.3633 -1.0277 0.0005 28 1 -0.3634 0.5139 0.8900 29 1 3.8047 -0.4643 -1.2482 30 1 3.7244 1.0749 -2.1385 31 1 6.0317 0.1669 -2.1375 32 1 6.0314 0.1679 -0.3578 33 1 8.0186 2.3049 -0.4120 34 1 12.3279 2.1700 -4.5359 35 1 13.5367 2.4219 -2.4103 36 1 12.2973 1.7400 0.7298 37 1 12.2689 4.5953 0.2044 38 1 14.6476 3.7889 -1.1737 39 1 15.0948 2.8076 1.0075 40 1 9.8473 2.4044 -0.2744 41 1 5.9172 2.3291 0.8906 42 1 5.8358 3.8682 -0.0001 43 1 3.6096 3.2361 0.8901 44 1 3.6099 3.2358 -0.8900 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14475160_12335834.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:32:11 Heat of formation + Delta-G solvation = -174.543484 kcal Electronic energy + Delta-G solvation = -29237.224480 eV Core-core repulsion = 24842.418776 eV Total energy + Delta-G solvation = -4394.805704 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 338.141 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -50.00682 -41.89978 -41.37175 -40.17421 -38.98421 -37.60209 -37.51464 -35.49919 -33.01056 -32.30414 -31.91120 -30.90063 -28.55811 -26.61849 -25.81254 -24.51392 -23.85951 -23.01200 -21.89028 -21.60525 -20.84708 -19.28924 -18.65494 -18.36078 -18.29097 -17.89010 -17.58264 -17.38878 -16.93379 -16.86446 -16.21563 -16.10210 -15.97947 -15.68060 -15.35113 -15.19235 -14.96003 -14.78434 -14.52908 -14.37241 -14.28301 -13.96889 -13.72844 -13.56088 -13.32895 -13.18465 -13.02500 -12.84397 -12.69674 -12.40828 -12.28814 -12.21724 -11.86817 -11.73121 -11.60642 -11.50217 -11.41185 -11.12306 -10.62462 -10.40153 -10.10689 -9.81568 -4.87003 -0.48317 -0.01564 1.07851 1.32711 1.62586 1.64559 1.68810 1.95146 2.03274 2.49108 3.06327 3.33908 3.44057 3.47181 3.53195 3.56461 3.63984 3.68912 3.89944 4.01858 4.05174 4.11641 4.17391 4.25702 4.26736 4.27410 4.30700 4.40767 4.49936 4.57985 4.64063 4.66957 4.76004 4.79676 4.83994 4.91885 4.96738 5.01946 5.06616 5.08143 5.15174 5.22295 5.24658 5.33602 5.42989 5.61112 6.38512 6.51503 6.63626 7.07387 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.362 6.362 3 C 0.462 3.538 4 O -0.541 6.541 5 C -0.074 4.074 6 H 0.140 0.860 7 C -0.103 4.103 8 C -0.120 4.120 9 C 0.142 3.858 10 H 0.063 0.937 11 N -0.704 5.704 12 C 0.554 3.446 13 O -0.571 6.571 14 C -0.188 4.188 15 C 0.132 3.868 16 F -0.138 7.138 17 C -0.153 4.153 18 C -0.052 4.052 19 C -0.131 4.131 20 C -0.073 4.073 21 O -0.544 6.544 22 Si 0.759 3.241 23 C -0.023 4.023 24 C -0.114 4.114 25 C -0.099 4.099 26 H 0.057 0.943 27 H 0.129 0.871 28 H 0.062 0.938 29 H 0.089 0.911 30 H 0.055 0.945 31 H 0.054 0.946 32 H 0.094 0.906 33 H 0.416 0.584 34 H 0.165 0.835 35 H 0.166 0.834 36 H 0.139 0.861 37 H 0.388 0.612 38 H -0.280 1.280 39 H -0.306 1.306 40 H 0.161 0.839 41 H 0.102 0.898 42 H 0.083 0.917 43 H 0.081 0.919 44 H 0.056 0.944 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.736 -3.428 5.210 8.473 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.278 6.278 3 C 0.306 3.694 4 O -0.431 6.431 5 C -0.093 4.093 6 H 0.158 0.842 7 C -0.141 4.141 8 C -0.158 4.158 9 C 0.037 3.963 10 H 0.081 0.919 11 N -0.356 5.356 12 C 0.342 3.658 13 O -0.451 6.451 14 C -0.192 4.192 15 C 0.112 3.888 16 F -0.116 7.116 17 C -0.172 4.172 18 C -0.069 4.069 19 C -0.132 4.132 20 C -0.182 4.182 21 O -0.352 6.352 22 Si 0.664 3.336 23 C -0.042 4.042 24 C -0.151 4.151 25 C -0.137 4.137 26 H 0.076 0.924 27 H 0.147 0.853 28 H 0.081 0.919 29 H 0.107 0.893 30 H 0.074 0.926 31 H 0.073 0.927 32 H 0.113 0.887 33 H 0.255 0.745 34 H 0.183 0.817 35 H 0.183 0.817 36 H 0.157 0.843 37 H 0.237 0.763 38 H -0.207 1.207 39 H -0.234 1.234 40 H 0.179 0.821 41 H 0.120 0.880 42 H 0.101 0.899 43 H 0.100 0.900 44 H 0.075 0.925 Dipole moment (debyes) X Y Z Total from point charges 5.571 -3.182 4.954 8.105 hybrid contribution -1.117 1.328 -0.324 1.765 sum 4.454 -1.853 4.629 6.686 Atomic orbital electron populations 1.23514 0.75167 1.05596 1.02341 1.86506 1.24647 1.33120 1.83543 1.24380 0.93057 0.80991 0.70948 1.90673 1.68170 1.37476 1.46731 1.21257 0.85048 0.99764 1.03241 0.84218 1.21429 0.95440 1.01743 0.95478 1.21842 0.94661 0.95928 1.03401 1.21074 0.78735 0.96664 0.99802 0.91854 1.45797 1.07460 1.73609 1.08708 1.18331 0.87239 0.76139 0.84090 1.90845 1.70725 1.50693 1.32869 1.20070 0.93083 1.11772 0.94278 1.18235 0.91170 0.98884 0.80550 1.91557 1.81461 1.92366 1.46226 1.21373 0.90741 1.03361 1.01710 1.21378 1.01256 0.93854 0.90432 1.20400 0.93997 1.02708 0.96087 1.25137 1.09288 0.90531 0.93279 1.86595 1.84649 1.16561 1.47386 0.94176 0.72443 0.88376 0.78556 1.21205 0.93981 0.92787 0.96187 1.21747 0.94123 1.02042 0.97215 1.21361 0.95518 0.93304 1.03540 0.92379 0.85280 0.91946 0.89261 0.92644 0.92733 0.88727 0.74541 0.81716 0.81662 0.84319 0.76261 1.20686 1.23441 0.82131 0.87990 0.89875 0.90044 0.92483 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.56 113.37 1.20 1.19 16 2 O -0.36 -1.15 10.47 -51.41 -0.54 -1.69 16 3 C 0.46 2.11 7.25 71.24 0.52 2.63 16 4 O -0.54 -6.09 15.73 21.97 0.35 -5.75 16 5 C -0.07 0.16 2.63 -11.54 -0.03 0.13 16 6 H 0.14 -1.04 8.14 -2.39 -0.02 -1.06 16 7 C -0.10 0.14 5.14 30.59 0.16 0.30 16 8 C -0.12 0.22 5.49 30.59 0.17 0.39 16 9 C 0.14 -0.14 2.45 44.99 0.11 -0.03 16 10 H 0.06 0.35 7.58 -2.39 -0.02 0.33 16 11 N -0.70 1.24 5.03 -445.58 -2.24 -1.00 16 12 C 0.55 3.43 7.73 86.74 0.67 4.11 16 13 O -0.57 -9.19 15.00 -3.92 -0.06 -9.24 16 14 C -0.19 -0.41 5.88 -20.05 -0.12 -0.53 16 15 C 0.13 0.59 7.29 22.67 0.17 0.76 16 16 F -0.14 -1.64 15.55 44.97 0.70 -0.94 16 17 C -0.15 0.42 10.01 22.28 0.22 0.65 16 18 C -0.05 0.37 8.66 22.32 0.19 0.56 16 19 C -0.13 0.90 5.38 -19.90 -0.11 0.79 16 20 C -0.07 0.60 2.81 71.24 0.20 0.81 16 21 O -0.54 2.77 12.77 -148.98 -1.90 0.86 16 22 Si 0.76 -5.90 29.78 68.60 2.04 -3.86 16 23 C -0.02 0.11 9.10 22.52 0.20 0.32 16 24 C -0.11 0.67 5.39 30.59 0.16 0.84 16 25 C -0.10 0.18 4.49 30.59 0.14 0.32 16 26 H 0.06 0.05 8.13 -2.39 -0.02 0.03 16 27 H 0.13 -0.78 8.14 -2.39 -0.02 -0.80 16 28 H 0.06 0.00 8.13 -2.39 -0.02 -0.02 16 29 H 0.09 -0.21 8.11 -2.38 -0.02 -0.23 16 30 H 0.05 0.12 8.14 -2.39 -0.02 0.10 16 31 H 0.05 0.19 8.14 -2.39 -0.02 0.17 16 32 H 0.09 -0.60 8.14 -2.39 -0.02 -0.62 16 33 H 0.42 -3.59 6.64 -92.71 -0.62 -4.21 16 34 H 0.17 -1.08 8.06 -2.91 -0.02 -1.11 16 35 H 0.17 -2.02 4.86 -2.91 -0.01 -2.03 16 36 H 0.14 -1.52 7.96 -2.39 -0.02 -1.54 16 37 H 0.39 -3.81 8.70 -74.06 -0.64 -4.46 16 38 H -0.28 1.08 7.11 99.48 0.71 1.78 16 39 H -0.31 -0.39 7.11 99.48 0.71 0.32 16 40 H 0.16 -1.61 6.41 -2.91 -0.02 -1.63 16 41 H 0.10 -1.11 8.14 -2.39 -0.02 -1.12 16 42 H 0.08 -0.50 8.14 -2.39 -0.02 -0.52 16 43 H 0.08 -0.12 8.10 -2.39 -0.02 -0.14 16 44 H 0.06 0.14 8.10 -2.39 -0.02 0.12 16 Total: 0.00 -27.04 366.58 2.03 -25.01 By element: Atomic # 1 Polarization: -16.45 SS G_CDS: -0.17 Total: -16.62 kcal Atomic # 6 Polarization: 9.37 SS G_CDS: 3.85 Total: 13.23 kcal Atomic # 7 Polarization: 1.24 SS G_CDS: -2.24 Total: -1.00 kcal Atomic # 8 Polarization: -13.66 SS G_CDS: -2.15 Total: -15.81 kcal Atomic # 9 Polarization: -1.64 SS G_CDS: 0.70 Total: -0.94 kcal Atomic # 14 Polarization: -5.90 SS G_CDS: 2.04 Total: -3.86 kcal Total: -27.04 2.03 -25.01 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14475160_12335834.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -149.538 kcal (2) G-P(sol) polarization free energy of solvation -27.036 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -176.574 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.030 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.006 kcal (6) G-S(sol) free energy of system = (1) + (5) -174.543 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds