Wall clock time and date at job start Sun Mar 7 2021 01:33:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45193 * 1 3 3 C 1.34222 * 117.00495 * 2 1 4 4 O 1.20826 * 119.99719 * 0.02562 * 3 2 1 5 5 C 1.50702 * 120.00388 * 179.97438 * 3 2 1 6 6 H 1.08993 * 109.46847 * 60.00256 * 5 3 2 7 7 C 1.52999 * 109.47228 * 179.97438 * 5 3 2 8 8 C 1.52999 * 109.47031 * 179.97438 * 7 5 3 9 9 C 1.52996 * 109.47703 * 300.00331 * 8 7 5 10 10 H 1.08999 * 109.47237 * 300.00281 * 9 8 7 11 11 N 1.46493 * 109.47222 * 179.97438 * 9 8 7 12 12 C 1.34784 * 119.99864 * 155.00033 * 11 9 8 13 13 O 1.21574 * 119.99695 * 359.72925 * 12 11 9 14 14 C 1.47694 * 120.00174 * 179.72594 * 12 11 9 15 15 C 1.39799 * 120.15568 * 179.71981 * 14 12 11 16 16 F 1.35098 * 120.08435 * 0.02562 * 15 14 12 17 17 C 1.38319 * 119.83220 * 179.74735 * 15 14 12 18 18 C 1.38190 * 120.14089 * 0.53546 * 17 15 14 19 19 C 1.50701 * 119.83968 * 179.76534 * 18 17 15 20 20 O 1.42894 * 109.47214 * 254.97897 * 19 18 17 21 21 Si 1.86300 * 109.47163 * 14.97835 * 19 18 17 22 22 C 1.38651 * 120.31673 * 359.73946 * 18 17 15 23 23 F 1.35098 * 119.91733 * 179.97438 * 22 18 17 24 24 C 1.38077 * 120.16656 * 359.97438 * 22 18 17 25 25 C 1.53000 * 109.46775 * 59.99747 * 9 8 7 26 26 C 1.52997 * 109.46936 * 300.00032 * 5 3 2 27 27 H 1.09001 * 109.46930 * 299.99811 * 1 2 3 28 28 H 1.09002 * 109.47260 * 59.99714 * 1 2 3 29 29 H 1.08995 * 109.47653 * 179.97438 * 1 2 3 30 30 H 1.09010 * 109.46991 * 60.00477 * 7 5 3 31 31 H 1.08994 * 109.47214 * 300.00495 * 7 5 3 32 32 H 1.09003 * 109.46971 * 179.97438 * 8 7 5 33 33 H 1.08999 * 109.47003 * 60.00755 * 8 7 5 34 34 H 0.97000 * 120.00740 * 334.72725 * 11 9 8 35 35 H 1.07999 * 119.92538 * 180.28044 * 17 15 14 36 36 H 1.08999 * 109.47057 * 134.97298 * 19 18 17 37 37 H 0.96702 * 113.99900 * 59.99383 * 20 19 18 38 38 H 1.48498 * 110.00223 * 180.02562 * 21 19 18 39 39 H 1.48508 * 109.99978 * 301.32158 * 21 19 18 40 40 H 1.07997 * 120.07252 * 179.97438 * 24 22 18 41 41 H 1.09005 * 109.47224 * 60.00408 * 25 9 8 42 42 H 1.09008 * 109.47230 * 180.02562 * 25 9 8 43 43 H 1.08993 * 109.47536 * 299.99802 * 26 5 3 44 44 H 1.09000 * 109.46884 * 60.00411 * 26 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4519 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4034 2.2092 0.0005 5 6 3.5663 1.2747 0.0006 6 1 3.9563 0.7805 -0.8891 7 6 4.0002 2.7419 -0.0002 8 6 5.5281 2.8219 0.0011 9 6 6.0742 2.1292 1.2512 10 1 5.6838 2.6240 2.1405 11 7 7.5371 2.2054 1.2519 12 6 8.2147 2.1398 2.4152 13 8 7.6115 2.0225 3.4642 14 6 9.6900 2.2105 2.4156 15 6 10.3958 2.1486 3.6207 16 9 9.7302 2.0235 4.7897 17 6 11.7776 2.2102 3.6129 18 6 12.4594 2.3435 2.4183 19 6 13.9647 2.4152 2.4181 20 8 14.3774 3.7623 2.1795 21 14 14.6136 1.8504 4.0706 22 6 11.7652 2.4112 1.2200 23 9 12.4400 2.5420 0.0569 24 6 10.3861 2.3451 1.2124 25 6 5.6403 0.6621 1.2519 26 6 4.1128 0.5814 1.2502 27 1 -0.3633 0.5138 0.8900 28 1 -0.3634 0.5139 -0.8900 29 1 -0.3634 -1.0276 -0.0005 30 1 3.6101 3.2366 0.8894 31 1 3.6108 3.2355 -0.8906 32 1 5.8372 3.8672 0.0000 33 1 5.9185 2.3272 -0.8883 34 1 8.0185 2.2990 0.4150 35 1 12.3245 2.1580 4.5426 36 1 14.3590 1.7698 1.6331 37 1 14.0618 4.3933 2.8407 38 1 16.0970 1.9169 4.0835 39 1 14.0580 2.7024 5.1526 40 1 9.8469 2.3983 0.2781 41 1 6.0307 0.1673 0.3625 42 1 6.0289 0.1686 2.1428 43 1 3.7228 1.0756 2.1399 44 1 3.8038 -0.4639 1.2502 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14475160_12360598.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:33:28 Heat of formation + Delta-G solvation = -214.983692 kcal Electronic energy + Delta-G solvation = -31591.931957 eV Core-core repulsion = 26725.918658 eV Total energy + Delta-G solvation = -4866.013299 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 356.131 amu Computer time = 0.93 seconds Orbital eigenvalues (eV) -50.11850 -50.00701 -41.85058 -41.33985 -40.19464 -39.02290 -37.81893 -37.41189 -35.50412 -33.56154 -32.03941 -31.43644 -31.17955 -28.68040 -27.78988 -25.08320 -24.50216 -23.96369 -23.56787 -22.08720 -21.72167 -21.01619 -19.71687 -18.90840 -18.67075 -18.56028 -17.99444 -17.78509 -17.45683 -17.32235 -17.09111 -16.91737 -16.56053 -16.30929 -16.07994 -15.94066 -15.66624 -15.53867 -15.28701 -15.22319 -14.97556 -14.66059 -14.27285 -14.20653 -13.98039 -13.80952 -13.75315 -13.42581 -13.24278 -13.08361 -13.00059 -12.72306 -12.53553 -12.42824 -12.34316 -11.97686 -11.79760 -11.70216 -11.52010 -11.34328 -11.07823 -10.87361 -10.66504 -10.22829 -9.84851 -5.13933 -0.85998 -0.38162 1.00633 1.19756 1.37324 1.40775 1.67043 1.78539 1.82719 2.23442 2.73427 2.78057 3.00769 3.09588 3.31145 3.38727 3.40151 3.47681 3.60872 3.68453 3.79168 3.93097 4.03381 4.09100 4.14469 4.17627 4.19655 4.24350 4.24681 4.27555 4.28331 4.43989 4.49945 4.57623 4.60044 4.64094 4.66536 4.81373 4.87143 4.96480 4.98961 5.10598 5.14667 5.29213 5.33771 5.41571 6.16408 6.23685 6.74188 6.98493 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.358 6.358 3 C 0.463 3.537 4 O -0.505 6.505 5 C -0.081 4.081 6 H 0.112 0.888 7 C -0.101 4.101 8 C -0.126 4.126 9 C 0.142 3.858 10 H 0.095 0.905 11 N -0.720 5.720 12 C 0.560 3.440 13 O -0.512 6.512 14 C -0.141 4.141 15 C 0.160 3.840 16 F -0.104 7.104 17 C -0.139 4.139 18 C -0.097 4.097 19 C -0.080 4.080 20 O -0.520 6.520 21 Si 0.696 3.304 22 C 0.111 3.889 23 F -0.121 7.121 24 C -0.094 4.094 25 C -0.128 4.128 26 C -0.108 4.108 27 H 0.064 0.936 28 H 0.063 0.937 29 H 0.103 0.897 30 H 0.078 0.922 31 H 0.081 0.919 32 H 0.079 0.921 33 H 0.074 0.926 34 H 0.400 0.600 35 H 0.158 0.842 36 H 0.127 0.873 37 H 0.378 0.622 38 H -0.249 1.249 39 H -0.254 1.254 40 H 0.152 0.848 41 H 0.071 0.929 42 H 0.078 0.922 43 H 0.073 0.927 44 H 0.083 0.917 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.222 -3.339 -2.595 4.402 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.275 6.275 3 C 0.306 3.694 4 O -0.392 6.392 5 C -0.100 4.100 6 H 0.130 0.870 7 C -0.139 4.139 8 C -0.164 4.164 9 C 0.038 3.962 10 H 0.113 0.887 11 N -0.372 5.372 12 C 0.346 3.654 13 O -0.387 6.387 14 C -0.145 4.145 15 C 0.139 3.861 16 F -0.082 7.082 17 C -0.158 4.158 18 C -0.099 4.099 19 C -0.189 4.189 20 O -0.326 6.326 21 Si 0.596 3.404 22 C 0.092 3.908 23 F -0.099 7.099 24 C -0.113 4.113 25 C -0.167 4.167 26 C -0.146 4.146 27 H 0.083 0.917 28 H 0.082 0.918 29 H 0.121 0.879 30 H 0.097 0.903 31 H 0.099 0.901 32 H 0.098 0.902 33 H 0.093 0.907 34 H 0.236 0.764 35 H 0.176 0.824 36 H 0.145 0.855 37 H 0.226 0.774 38 H -0.173 1.173 39 H -0.179 1.179 40 H 0.169 0.831 41 H 0.090 0.910 42 H 0.096 0.904 43 H 0.092 0.908 44 H 0.102 0.898 Dipole moment (debyes) X Y Z Total from point charges 1.276 -3.178 -1.630 3.793 hybrid contribution -0.297 1.256 -0.694 1.465 sum 0.979 -1.922 -2.323 3.171 Atomic orbital electron populations 1.23315 0.75950 1.03989 1.02712 1.86500 1.23715 1.33365 1.83886 1.23784 0.92009 0.81419 0.72185 1.90693 1.67200 1.36379 1.44898 1.21173 0.87031 0.99491 1.02309 0.87012 1.21392 0.94430 0.93500 1.04577 1.21824 0.95549 1.01715 0.97303 1.21128 0.78451 0.96519 1.00084 0.88669 1.45935 1.07667 1.74928 1.08684 1.17829 0.86019 0.77188 0.84320 1.90899 1.69307 1.47664 1.30832 1.19889 0.94300 1.07821 0.92503 1.17493 0.89316 0.98020 0.81273 1.91657 1.80346 1.91944 1.44273 1.21078 0.92406 1.03034 0.99276 1.20424 0.97815 1.00116 0.91555 1.25109 0.90424 0.88211 1.15141 1.86689 1.76510 1.16145 1.53242 0.94748 0.81334 0.90716 0.73618 1.17218 0.89294 1.02599 0.81735 1.91586 1.79989 1.92888 1.45416 1.21183 0.92540 0.99261 0.98340 1.21927 0.95027 0.96221 1.03503 1.21488 0.95361 1.01698 0.96097 0.91742 0.91777 0.87853 0.90341 0.90074 0.90222 0.90745 0.76420 0.82446 0.85483 0.77395 1.17287 1.17888 0.83072 0.91026 0.90381 0.90833 0.89792 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.40 10.47 -39.24 -0.41 -0.81 16 3 C 0.46 0.71 7.26 36.01 0.26 0.97 16 4 O -0.50 -2.28 15.73 -18.75 -0.29 -2.58 16 5 C -0.08 0.12 2.63 -91.77 -0.24 -0.12 16 6 H 0.11 -0.35 8.14 -51.93 -0.42 -0.77 16 7 C -0.10 0.17 4.49 -26.73 -0.12 0.05 16 8 C -0.13 0.42 5.39 -26.73 -0.14 0.27 16 9 C 0.14 -0.24 2.46 -67.94 -0.17 -0.41 16 10 H 0.10 0.04 7.57 -51.93 -0.39 -0.35 16 11 N -0.72 1.43 5.03 -54.80 -0.28 1.15 16 12 C 0.56 0.65 7.73 -12.39 -0.10 0.55 16 13 O -0.51 -2.63 15.00 5.30 0.08 -2.55 16 14 C -0.14 0.02 5.88 -104.92 -0.62 -0.59 16 15 C 0.16 0.10 7.28 -38.97 -0.28 -0.18 16 16 F -0.10 -0.33 15.55 2.25 0.04 -0.30 16 17 C -0.14 0.20 8.62 -39.57 -0.34 -0.15 16 18 C -0.10 0.14 5.27 -104.49 -0.55 -0.41 16 19 C -0.08 0.13 2.44 36.01 0.09 0.22 16 20 O -0.52 0.02 12.88 -35.23 -0.45 -0.43 16 21 Si 0.70 -1.78 30.23 -169.99 -5.14 -6.92 16 22 C 0.11 -0.11 7.23 -39.49 -0.29 -0.39 16 23 F -0.12 -0.06 16.73 2.25 0.04 -0.02 16 24 C -0.09 0.20 9.52 -39.11 -0.37 -0.17 16 25 C -0.13 0.24 5.49 -26.75 -0.15 0.10 16 26 C -0.11 0.18 5.13 -26.75 -0.14 0.04 16 27 H 0.06 -0.03 8.13 -51.93 -0.42 -0.45 16 28 H 0.06 -0.04 8.13 -51.93 -0.42 -0.46 16 29 H 0.10 -0.31 8.14 -51.93 -0.42 -0.73 16 30 H 0.08 -0.03 8.10 -51.92 -0.42 -0.45 16 31 H 0.08 -0.10 8.10 -51.93 -0.42 -0.52 16 32 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 33 H 0.07 -0.35 8.14 -51.93 -0.42 -0.77 16 34 H 0.40 -1.91 6.64 -40.82 -0.27 -2.18 16 35 H 0.16 -0.44 4.83 -52.49 -0.25 -0.69 16 36 H 0.13 -0.27 7.89 -51.93 -0.41 -0.68 16 37 H 0.38 -1.21 8.70 45.56 0.40 -0.82 16 38 H -0.25 -0.18 7.11 56.52 0.40 0.22 16 39 H -0.25 0.27 6.68 56.52 0.38 0.65 16 40 H 0.15 -0.76 6.40 -52.49 -0.34 -1.10 16 41 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 42 H 0.08 0.00 8.14 -51.92 -0.42 -0.43 16 43 H 0.07 -0.05 8.14 -51.93 -0.42 -0.48 16 44 H 0.08 -0.15 8.11 -51.93 -0.42 -0.57 16 LS Contribution 372.39 15.07 5.61 5.61 Total: 0.00 -9.48 372.39 -8.45 -17.93 By element: Atomic # 1 Polarization: -6.36 SS G_CDS: -5.56 Total: -11.91 kcal Atomic # 6 Polarization: 2.92 SS G_CDS: -2.09 Total: 0.83 kcal Atomic # 7 Polarization: 1.43 SS G_CDS: -0.28 Total: 1.15 kcal Atomic # 8 Polarization: -5.29 SS G_CDS: -1.08 Total: -6.37 kcal Atomic # 9 Polarization: -0.39 SS G_CDS: 0.07 Total: -0.32 kcal Atomic # 14 Polarization: -1.78 SS G_CDS: -5.14 Total: -6.92 kcal Total LS contribution 5.61 Total: 5.61 kcal Total: -9.48 -8.45 -17.93 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14475160_12360598.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -197.053 kcal (2) G-P(sol) polarization free energy of solvation -9.478 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -206.531 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.453 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.930 kcal (6) G-S(sol) free energy of system = (1) + (5) -214.984 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.93 seconds