Wall clock time and date at job start Sun Mar 7 2021 01:33:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45193 * 1 3 3 C 1.34222 * 117.00495 * 2 1 4 4 O 1.20826 * 119.99719 * 0.02562 * 3 2 1 5 5 C 1.50702 * 120.00388 * 179.97438 * 3 2 1 6 6 H 1.08993 * 109.46847 * 60.00256 * 5 3 2 7 7 C 1.52999 * 109.47228 * 179.97438 * 5 3 2 8 8 C 1.52999 * 109.47031 * 179.97438 * 7 5 3 9 9 C 1.52996 * 109.47703 * 300.00331 * 8 7 5 10 10 H 1.08999 * 109.47237 * 300.00281 * 9 8 7 11 11 N 1.46493 * 109.47222 * 179.97438 * 9 8 7 12 12 C 1.34784 * 119.99864 * 155.00033 * 11 9 8 13 13 O 1.21574 * 119.99695 * 359.72925 * 12 11 9 14 14 C 1.47694 * 120.00174 * 179.72594 * 12 11 9 15 15 C 1.39799 * 120.15568 * 179.71981 * 14 12 11 16 16 F 1.35098 * 120.08435 * 0.02562 * 15 14 12 17 17 C 1.38319 * 119.83220 * 179.74735 * 15 14 12 18 18 C 1.38190 * 120.14089 * 0.53546 * 17 15 14 19 19 C 1.50701 * 119.83968 * 179.76534 * 18 17 15 20 20 O 1.42894 * 109.47214 * 254.97897 * 19 18 17 21 21 Si 1.86300 * 109.47163 * 14.97835 * 19 18 17 22 22 C 1.38651 * 120.31673 * 359.73946 * 18 17 15 23 23 F 1.35098 * 119.91733 * 179.97438 * 22 18 17 24 24 C 1.38077 * 120.16656 * 359.97438 * 22 18 17 25 25 C 1.53000 * 109.46775 * 59.99747 * 9 8 7 26 26 C 1.52997 * 109.46936 * 300.00032 * 5 3 2 27 27 H 1.09001 * 109.46930 * 299.99811 * 1 2 3 28 28 H 1.09002 * 109.47260 * 59.99714 * 1 2 3 29 29 H 1.08995 * 109.47653 * 179.97438 * 1 2 3 30 30 H 1.09010 * 109.46991 * 60.00477 * 7 5 3 31 31 H 1.08994 * 109.47214 * 300.00495 * 7 5 3 32 32 H 1.09003 * 109.46971 * 179.97438 * 8 7 5 33 33 H 1.08999 * 109.47003 * 60.00755 * 8 7 5 34 34 H 0.97000 * 120.00740 * 334.72725 * 11 9 8 35 35 H 1.07999 * 119.92538 * 180.28044 * 17 15 14 36 36 H 1.08999 * 109.47057 * 134.97298 * 19 18 17 37 37 H 0.96702 * 113.99900 * 59.99383 * 20 19 18 38 38 H 1.48498 * 110.00223 * 180.02562 * 21 19 18 39 39 H 1.48508 * 109.99978 * 301.32158 * 21 19 18 40 40 H 1.07997 * 120.07252 * 179.97438 * 24 22 18 41 41 H 1.09005 * 109.47224 * 60.00408 * 25 9 8 42 42 H 1.09008 * 109.47230 * 180.02562 * 25 9 8 43 43 H 1.08993 * 109.47536 * 299.99802 * 26 5 3 44 44 H 1.09000 * 109.46884 * 60.00411 * 26 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4519 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4034 2.2092 0.0005 5 6 3.5663 1.2747 0.0006 6 1 3.9563 0.7805 -0.8891 7 6 4.0002 2.7419 -0.0002 8 6 5.5281 2.8219 0.0011 9 6 6.0742 2.1292 1.2512 10 1 5.6838 2.6240 2.1405 11 7 7.5371 2.2054 1.2519 12 6 8.2147 2.1398 2.4152 13 8 7.6115 2.0225 3.4642 14 6 9.6900 2.2105 2.4156 15 6 10.3958 2.1486 3.6207 16 9 9.7302 2.0235 4.7897 17 6 11.7776 2.2102 3.6129 18 6 12.4594 2.3435 2.4183 19 6 13.9647 2.4152 2.4181 20 8 14.3774 3.7623 2.1795 21 14 14.6136 1.8504 4.0706 22 6 11.7652 2.4112 1.2200 23 9 12.4400 2.5420 0.0569 24 6 10.3861 2.3451 1.2124 25 6 5.6403 0.6621 1.2519 26 6 4.1128 0.5814 1.2502 27 1 -0.3633 0.5138 0.8900 28 1 -0.3634 0.5139 -0.8900 29 1 -0.3634 -1.0276 -0.0005 30 1 3.6101 3.2366 0.8894 31 1 3.6108 3.2355 -0.8906 32 1 5.8372 3.8672 0.0000 33 1 5.9185 2.3272 -0.8883 34 1 8.0185 2.2990 0.4150 35 1 12.3245 2.1580 4.5426 36 1 14.3590 1.7698 1.6331 37 1 14.0618 4.3933 2.8407 38 1 16.0970 1.9169 4.0835 39 1 14.0580 2.7024 5.1526 40 1 9.8469 2.3983 0.2781 41 1 6.0307 0.1673 0.3625 42 1 6.0289 0.1686 2.1428 43 1 3.7228 1.0756 2.1399 44 1 3.8038 -0.4639 1.2502 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14475160_12360598.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:33:27 Heat of formation + Delta-G solvation = -214.175087 kcal Electronic energy + Delta-G solvation = -31591.896893 eV Core-core repulsion = 26725.918658 eV Total energy + Delta-G solvation = -4865.978235 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 356.131 amu Computer time = 4.28 seconds Orbital eigenvalues (eV) -50.09988 -50.07831 -41.89020 -41.37411 -40.13430 -39.00207 -37.76791 -37.53881 -35.52568 -33.49348 -31.89417 -31.36651 -31.12276 -28.64845 -27.71248 -25.04311 -24.40078 -23.82821 -23.53834 -22.07784 -21.69324 -20.95331 -19.65964 -18.87048 -18.64325 -18.61951 -17.96802 -17.82037 -17.49360 -17.32478 -17.07629 -16.89435 -16.57793 -16.23171 -16.06600 -15.88951 -15.66652 -15.44391 -15.18154 -15.16187 -14.94406 -14.66242 -14.27494 -14.15275 -13.96027 -13.81006 -13.70193 -13.30225 -13.18405 -13.02803 -12.96151 -12.69515 -12.44920 -12.34609 -12.18590 -11.93022 -11.85594 -11.58194 -11.49179 -11.39900 -11.13540 -10.78016 -10.58850 -10.17791 -9.80964 -4.96078 -0.79867 -0.29563 1.09500 1.16167 1.40430 1.54160 1.69660 1.87219 1.91603 2.25783 2.80098 2.86156 3.11735 3.25473 3.43595 3.48048 3.51835 3.59829 3.69377 3.80478 3.91475 4.06957 4.17941 4.19365 4.27161 4.27973 4.30075 4.32362 4.34403 4.39361 4.43715 4.54439 4.61952 4.68124 4.70321 4.75115 4.78760 4.93051 5.05056 5.09435 5.10989 5.23846 5.25807 5.35079 5.38990 5.44319 6.34714 6.38698 6.65140 7.02660 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.362 6.362 3 C 0.461 3.539 4 O -0.541 6.541 5 C -0.075 4.075 6 H 0.140 0.860 7 C -0.100 4.100 8 C -0.115 4.115 9 C 0.142 3.858 10 H 0.067 0.933 11 N -0.701 5.701 12 C 0.558 3.442 13 O -0.560 6.560 14 C -0.147 4.147 15 C 0.139 3.861 16 F -0.125 7.125 17 C -0.131 4.131 18 C -0.091 4.091 19 C -0.086 4.086 20 O -0.540 6.540 21 Si 0.771 3.229 22 C 0.104 3.896 23 F -0.127 7.127 24 C -0.075 4.075 25 C -0.121 4.121 26 C -0.103 4.103 27 H 0.057 0.943 28 H 0.061 0.939 29 H 0.129 0.871 30 H 0.057 0.943 31 H 0.080 0.920 32 H 0.084 0.916 33 H 0.102 0.898 34 H 0.417 0.583 35 H 0.170 0.830 36 H 0.133 0.867 37 H 0.390 0.610 38 H -0.294 1.294 39 H -0.272 1.272 40 H 0.184 0.816 41 H 0.095 0.905 42 H 0.057 0.943 43 H 0.055 0.945 44 H 0.088 0.912 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.947 -3.978 -4.482 6.301 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.278 6.278 3 C 0.306 3.694 4 O -0.431 6.431 5 C -0.093 4.093 6 H 0.157 0.843 7 C -0.138 4.138 8 C -0.152 4.152 9 C 0.037 3.963 10 H 0.085 0.915 11 N -0.354 5.354 12 C 0.345 3.655 13 O -0.440 6.440 14 C -0.151 4.151 15 C 0.118 3.882 16 F -0.103 7.103 17 C -0.150 4.150 18 C -0.093 4.093 19 C -0.195 4.195 20 O -0.348 6.348 21 Si 0.675 3.325 22 C 0.084 3.916 23 F -0.106 7.106 24 C -0.094 4.094 25 C -0.159 4.159 26 C -0.141 4.141 27 H 0.076 0.924 28 H 0.080 0.920 29 H 0.147 0.853 30 H 0.076 0.924 31 H 0.098 0.902 32 H 0.103 0.897 33 H 0.121 0.879 34 H 0.256 0.744 35 H 0.187 0.813 36 H 0.151 0.849 37 H 0.240 0.760 38 H -0.222 1.222 39 H -0.198 1.198 40 H 0.201 0.799 41 H 0.113 0.887 42 H 0.076 0.924 43 H 0.074 0.926 44 H 0.107 0.893 Dipole moment (debyes) X Y Z Total from point charges 1.989 -3.827 -3.565 5.595 hybrid contribution -0.516 1.464 -0.118 1.556 sum 1.473 -2.363 -3.683 4.617 Atomic orbital electron populations 1.23509 0.75199 1.05584 1.02326 1.86504 1.24620 1.33174 1.83546 1.24417 0.93126 0.80965 0.70933 1.90675 1.68201 1.37487 1.46749 1.21265 0.84950 0.99831 1.03301 0.84262 1.21362 0.95633 0.93246 1.03530 1.21758 0.94031 1.02173 0.97263 1.21100 0.78480 0.96720 0.99962 0.91469 1.45794 1.07589 1.73373 1.08619 1.18069 0.86560 0.76559 0.84338 1.90879 1.70255 1.50175 1.32654 1.19835 0.93620 1.08636 0.92994 1.17816 0.90107 0.99313 0.80976 1.91602 1.80893 1.92358 1.45497 1.21095 0.91591 1.02450 0.99826 1.20433 0.97862 0.99560 0.91425 1.25289 0.90297 0.87829 1.16054 1.86655 1.76880 1.17014 1.54277 0.93853 0.77451 0.89394 0.71791 1.17349 0.89745 1.02936 0.81528 1.91574 1.80189 1.93011 1.45787 1.21365 0.92120 0.97249 0.98690 1.21852 0.94573 0.95920 1.03586 1.21424 0.95574 1.01712 0.95422 0.92371 0.91985 0.85301 0.92444 0.90161 0.89729 0.87927 0.74399 0.81331 0.84888 0.76046 1.22175 1.19823 0.79926 0.88689 0.92417 0.92568 0.89329 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 113.37 1.20 1.17 16 2 O -0.36 -0.86 10.47 -51.34 -0.54 -1.40 16 3 C 0.46 1.66 7.26 71.24 0.52 2.18 16 4 O -0.54 -5.64 15.73 21.96 0.35 -5.29 16 5 C -0.07 0.26 2.63 -11.54 -0.03 0.23 16 6 H 0.14 -1.21 8.14 -2.39 -0.02 -1.23 16 7 C -0.10 0.33 4.49 30.59 0.14 0.47 16 8 C -0.11 0.92 5.39 30.59 0.16 1.08 16 9 C 0.14 -0.50 2.46 44.99 0.11 -0.39 16 10 H 0.07 0.18 7.57 -2.39 -0.02 0.16 16 11 N -0.70 3.39 5.03 -445.56 -2.24 1.15 16 12 C 0.56 1.54 7.73 86.74 0.67 2.21 16 13 O -0.56 -6.89 15.00 -3.95 -0.06 -6.95 16 14 C -0.15 0.08 5.88 -20.06 -0.12 -0.04 16 15 C 0.14 0.27 7.28 22.67 0.17 0.43 16 16 F -0.13 -1.03 15.55 44.97 0.70 -0.33 16 17 C -0.13 0.39 8.62 22.28 0.19 0.58 16 18 C -0.09 0.33 5.27 -19.78 -0.10 0.23 16 19 C -0.09 0.34 2.44 71.24 0.17 0.51 16 20 O -0.54 0.27 12.88 -148.98 -1.92 -1.65 16 21 Si 0.77 -4.02 30.23 68.60 2.07 -1.94 16 22 C 0.10 -0.34 7.23 22.33 0.16 -0.18 16 23 F -0.13 0.07 16.73 44.97 0.75 0.82 16 24 C -0.08 0.45 9.52 22.57 0.21 0.66 16 25 C -0.12 0.50 5.49 30.58 0.17 0.67 16 26 C -0.10 0.32 5.13 30.58 0.16 0.47 16 27 H 0.06 0.02 8.13 -2.39 -0.02 0.00 16 28 H 0.06 -0.03 8.13 -2.39 -0.02 -0.05 16 29 H 0.13 -0.85 8.14 -2.39 -0.02 -0.87 16 30 H 0.06 0.06 8.10 -2.38 -0.02 0.04 16 31 H 0.08 -0.22 8.10 -2.39 -0.02 -0.24 16 32 H 0.08 -0.70 8.14 -2.39 -0.02 -0.72 16 33 H 0.10 -1.33 8.14 -2.39 -0.02 -1.35 16 34 H 0.42 -5.01 6.64 -92.71 -0.62 -5.63 16 35 H 0.17 -0.97 4.83 -2.91 -0.01 -0.98 16 36 H 0.13 -0.68 7.89 -2.39 -0.02 -0.70 16 37 H 0.39 -2.61 8.70 -74.06 -0.64 -3.25 16 38 H -0.29 -0.75 7.11 99.48 0.71 -0.04 16 39 H -0.27 0.62 6.68 99.48 0.66 1.29 16 40 H 0.18 -2.41 6.40 -2.91 -0.02 -2.43 16 41 H 0.09 -0.81 8.14 -2.38 -0.02 -0.83 16 42 H 0.06 0.04 8.14 -2.38 -0.02 0.02 16 43 H 0.06 0.03 8.14 -2.39 -0.02 0.01 16 44 H 0.09 -0.34 8.11 -2.39 -0.02 -0.36 16 Total: 0.00 -25.17 372.39 2.70 -22.47 By element: Atomic # 1 Polarization: -16.97 SS G_CDS: -0.19 Total: -17.16 kcal Atomic # 6 Polarization: 6.51 SS G_CDS: 3.78 Total: 10.29 kcal Atomic # 7 Polarization: 3.39 SS G_CDS: -2.24 Total: 1.15 kcal Atomic # 8 Polarization: -13.12 SS G_CDS: -2.17 Total: -15.29 kcal Atomic # 9 Polarization: -0.96 SS G_CDS: 1.45 Total: 0.49 kcal Atomic # 14 Polarization: -4.02 SS G_CDS: 2.07 Total: -1.94 kcal Total: -25.17 2.70 -22.47 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14475160_12360598.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -191.704 kcal (2) G-P(sol) polarization free energy of solvation -25.174 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -216.878 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.703 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.471 kcal (6) G-S(sol) free energy of system = (1) + (5) -214.175 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 4.28 seconds