Wall clock time and date at job start Sun Mar 7 2021 01:34:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45200 * 1 3 3 C 1.34228 * 116.99897 * 2 1 4 4 O 1.20817 * 120.00228 * 359.97438 * 3 2 1 5 5 C 1.50701 * 120.00031 * 179.97438 * 3 2 1 6 6 H 1.09004 * 109.47057 * 300.00329 * 5 3 2 7 7 C 1.53001 * 109.47065 * 59.99647 * 5 3 2 8 8 C 1.53003 * 109.47122 * 179.97438 * 7 5 3 9 9 C 1.52995 * 109.47251 * 300.00093 * 8 7 5 10 10 H 1.08999 * 109.47360 * 299.99970 * 9 8 7 11 11 N 1.46504 * 109.47222 * 179.97438 * 9 8 7 12 12 C 1.34776 * 120.00001 * 84.99908 * 11 9 8 13 13 O 1.21574 * 119.99693 * 0.02562 * 12 11 9 14 14 C 1.47655 * 120.00080 * 179.97438 * 12 11 9 15 15 C 1.40172 * 119.97176 * 0.02562 * 14 12 11 16 16 C 1.36350 * 120.66562 * 180.27693 * 15 14 12 17 17 C 1.39325 * 120.23954 * 359.44130 * 16 15 14 18 18 N 1.37401 * 133.25982 * 180.22407 * 17 16 15 19 19 C 1.36854 * 109.98783 * 180.27615 * 18 17 16 20 20 C 1.34194 * 109.96649 * 359.97438 * 19 18 17 21 21 C 1.50700 * 126.54037 * 180.02562 * 20 19 18 22 22 O 1.42894 * 109.47330 * 104.96010 * 21 20 19 23 23 Si 1.86298 * 109.47206 * 344.95896 * 21 20 19 24 24 C 1.40910 * 119.63947 * 0.52890 * 17 16 15 25 25 C 1.39186 * 119.97131 * 179.97438 * 14 12 11 26 26 C 1.53008 * 109.46773 * 60.00427 * 9 8 7 27 27 C 1.52998 * 109.46747 * 299.99290 * 26 9 8 28 28 H 1.08992 * 109.47186 * 300.00023 * 1 2 3 29 29 H 1.08999 * 109.46602 * 60.00743 * 1 2 3 30 30 H 1.09002 * 109.46932 * 180.02562 * 1 2 3 31 31 H 1.09001 * 109.47706 * 300.00474 * 7 5 3 32 32 H 1.09004 * 109.46627 * 60.00418 * 7 5 3 33 33 H 1.09000 * 109.47036 * 180.02562 * 8 7 5 34 34 H 1.08999 * 109.46914 * 60.00336 * 8 7 5 35 35 H 0.97007 * 119.99783 * 265.00811 * 11 9 8 36 36 H 1.08002 * 119.66417 * 359.97438 * 15 14 12 37 37 H 1.08003 * 119.87901 * 179.69763 * 16 15 14 38 38 H 0.97003 * 125.00332 * 0.24120 * 18 17 16 39 39 H 1.07999 * 125.02000 * 180.02562 * 19 18 17 40 40 H 1.09006 * 109.46760 * 224.95924 * 21 20 19 41 41 H 0.96693 * 114.00123 * 300.00383 * 22 21 20 42 42 H 1.48503 * 110.00040 * 180.02562 * 23 21 20 43 43 H 1.48503 * 109.99972 * 301.31841 * 23 21 20 44 44 H 1.07993 * 120.30738 * 359.97438 * 25 14 12 45 45 H 1.08994 * 109.47140 * 59.99862 * 26 9 8 46 46 H 1.08998 * 109.46810 * 179.97438 * 26 9 8 47 47 H 1.09000 * 109.46900 * 180.02562 * 27 26 9 48 48 H 1.08999 * 109.47397 * 300.00464 * 27 26 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5663 1.2749 0.0006 6 1 3.9557 0.7809 0.8908 7 6 4.1139 0.5810 -1.2483 8 6 5.6418 0.6617 -1.2480 9 6 6.0750 2.1290 -1.2485 10 1 5.6853 2.6226 -2.1388 11 7 7.5380 2.2062 -1.2477 12 6 8.2171 2.1395 -2.4100 13 8 7.6154 2.0157 -3.4591 14 6 9.6915 2.2179 -2.4092 15 6 10.3845 2.3612 -1.1992 16 6 11.7456 2.4407 -1.1825 17 6 12.4673 2.3685 -2.3720 18 7 13.8093 2.4135 -2.6634 19 6 13.9986 2.3038 -4.0144 20 6 12.8146 2.1858 -4.6349 21 6 12.5894 2.0417 -6.1180 22 8 12.2434 0.6881 -6.4180 23 14 14.1473 2.5014 -7.0303 24 6 11.7824 2.2240 -3.5950 25 6 10.3922 2.1484 -3.6098 26 6 5.5275 2.8228 0.0005 27 6 3.9997 2.7422 0.0001 28 1 -0.3633 0.5138 0.8899 29 1 -0.3632 0.5137 -0.8901 30 1 -0.3633 -1.0277 0.0005 31 1 3.8048 -0.4643 -1.2483 32 1 3.7245 1.0750 -2.1385 33 1 6.0318 0.1677 -2.1379 34 1 6.0315 0.1680 -0.3578 35 1 8.0180 2.3052 -0.4105 36 1 9.8345 2.4140 -0.2712 37 1 12.2663 2.5558 -0.2433 38 1 14.5181 2.5095 -2.0081 39 1 14.9591 2.3104 -4.5081 40 1 11.7787 2.7012 -6.4280 41 1 12.9205 0.0446 -6.1685 42 1 13.9379 2.3641 -8.4941 43 1 14.5353 3.8967 -6.7019 44 1 9.8625 2.0368 -4.5442 45 1 5.9173 2.3292 0.8906 46 1 5.8366 3.8680 0.0003 47 1 3.6096 3.2369 0.8896 48 1 3.6099 3.2359 -0.8901 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14475160_13287722.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:34:30 Heat of formation + Delta-G solvation = -99.916540 kcal Electronic energy + Delta-G solvation = -31307.968774 eV Core-core repulsion = 26908.437302 eV Total energy + Delta-G solvation = -4399.531472 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.161 amu Computer time = 7.55 seconds Orbital eigenvalues (eV) -42.49319 -41.72227 -40.84281 -39.08730 -37.87581 -37.43631 -37.27083 -35.25257 -33.27464 -31.96355 -31.70773 -30.66778 -30.11344 -28.48603 -26.48115 -25.42851 -23.93661 -23.85894 -23.46888 -21.91371 -21.41185 -20.99065 -20.59669 -19.31134 -18.57604 -18.41091 -17.78318 -17.54827 -17.36228 -17.30181 -16.87011 -16.23434 -15.94859 -15.84069 -15.55644 -15.25375 -15.20152 -15.06982 -14.88951 -14.76833 -14.69856 -14.21005 -14.04943 -13.93963 -13.79919 -13.65278 -13.55749 -13.31939 -13.00833 -12.63584 -12.58744 -12.36888 -12.28486 -12.24182 -12.17825 -11.87454 -11.73947 -11.60231 -11.40656 -11.23954 -10.79060 -10.75875 -10.32059 -10.00761 -9.32810 -8.83412 -5.08609 -0.04788 0.18498 1.25303 1.30601 1.46816 1.64980 1.74741 1.96604 2.00085 2.01939 2.18705 2.97741 3.48432 3.52046 3.57626 3.58709 3.65991 3.74911 3.79569 3.87279 3.92015 4.04942 4.07806 4.17141 4.21510 4.26159 4.28466 4.31233 4.35909 4.38108 4.42135 4.50540 4.56964 4.60356 4.63998 4.72407 4.78364 4.93422 4.96354 5.01700 5.06310 5.09017 5.21268 5.24541 5.28817 5.38516 5.45323 5.48486 5.58099 5.59939 5.97645 6.35075 6.58265 6.69572 6.79571 7.35419 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.358 6.358 3 C 0.464 3.536 4 O -0.505 6.505 5 C -0.081 4.081 6 H 0.111 0.889 7 C -0.108 4.108 8 C -0.128 4.128 9 C 0.143 3.857 10 H 0.092 0.908 11 N -0.726 5.726 12 C 0.565 3.435 13 O -0.536 6.536 14 C -0.169 4.169 15 C -0.067 4.067 16 C -0.134 4.134 17 C 0.118 3.882 18 N -0.585 5.585 19 C 0.061 3.939 20 C -0.192 4.192 21 C -0.034 4.034 22 O -0.539 6.539 23 Si 0.687 3.313 24 C -0.103 4.103 25 C 0.007 3.993 26 C -0.125 4.125 27 C -0.101 4.101 28 H 0.063 0.937 29 H 0.064 0.936 30 H 0.103 0.897 31 H 0.082 0.918 32 H 0.072 0.928 33 H 0.077 0.923 34 H 0.070 0.930 35 H 0.399 0.601 36 H 0.128 0.872 37 H 0.127 0.873 38 H 0.421 0.579 39 H 0.179 0.821 40 H 0.113 0.887 41 H 0.376 0.624 42 H -0.254 1.254 43 H -0.256 1.256 44 H 0.138 0.862 45 H 0.073 0.927 46 H 0.078 0.922 47 H 0.079 0.921 48 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.993 -2.211 5.339 9.071 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.275 6.275 3 C 0.306 3.694 4 O -0.392 6.392 5 C -0.100 4.100 6 H 0.129 0.871 7 C -0.146 4.146 8 C -0.166 4.166 9 C 0.038 3.962 10 H 0.110 0.890 11 N -0.377 5.377 12 C 0.354 3.646 13 O -0.413 6.413 14 C -0.173 4.173 15 C -0.087 4.087 16 C -0.155 4.155 17 C 0.009 3.991 18 N -0.188 5.188 19 C -0.065 4.065 20 C -0.200 4.200 21 C -0.146 4.146 22 O -0.344 6.344 23 Si 0.588 3.412 24 C -0.107 4.107 25 C -0.013 4.013 26 C -0.163 4.163 27 C -0.139 4.139 28 H 0.082 0.918 29 H 0.082 0.918 30 H 0.121 0.879 31 H 0.101 0.899 32 H 0.091 0.909 33 H 0.096 0.904 34 H 0.088 0.912 35 H 0.234 0.766 36 H 0.146 0.854 37 H 0.145 0.855 38 H 0.259 0.741 39 H 0.195 0.805 40 H 0.130 0.870 41 H 0.223 0.777 42 H -0.178 1.178 43 H -0.181 1.181 44 H 0.156 0.844 45 H 0.091 0.909 46 H 0.097 0.903 47 H 0.098 0.902 48 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges 6.265 -1.155 3.818 7.427 hybrid contribution -0.200 0.337 1.151 1.216 sum 6.065 -0.819 4.969 7.883 Atomic orbital electron populations 1.23310 0.76019 1.03954 1.02686 1.86507 1.23666 1.33398 1.83906 1.23811 0.92043 0.81389 0.72134 1.90686 1.67212 1.36383 1.44939 1.21178 0.86918 0.99534 1.02329 0.87058 1.21502 0.95566 1.01552 0.96027 1.21927 0.94766 0.96524 1.03406 1.21052 0.79236 0.96181 0.99713 0.88972 1.45946 1.07198 1.75512 1.09085 1.18180 0.87034 0.75805 0.83612 1.90800 1.70122 1.49177 1.31250 1.19555 0.92569 1.11121 0.94056 1.20585 0.93416 0.97796 0.96857 1.19664 0.93583 1.06896 0.95320 1.18436 0.83601 1.01659 0.95367 1.41733 1.06062 1.63490 1.07472 1.21680 0.99035 1.03255 0.82545 1.20764 0.91504 1.12271 0.95418 1.24408 1.09817 0.87500 0.92835 1.86536 1.47911 1.15128 1.84852 0.95349 0.81459 0.83819 0.80532 1.18928 0.92841 1.07033 0.91941 1.20705 0.91427 0.91195 0.97929 1.21817 0.95370 1.01663 0.97483 1.21390 0.94620 0.93427 1.04446 0.91801 0.91759 0.87882 0.89919 0.90900 0.90433 0.91172 0.76573 0.85404 0.85460 0.74113 0.80450 0.87017 0.77658 1.17843 1.18103 0.84413 0.90876 0.90334 0.90208 0.90405 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.00 10.56 101.05 1.07 1.06 16 2 O -0.36 -0.64 10.47 -39.25 -0.41 -1.05 16 3 C 0.46 1.05 7.25 36.01 0.26 1.32 16 4 O -0.51 -2.62 15.73 -18.74 -0.29 -2.92 16 5 C -0.08 0.05 2.63 -91.77 -0.24 -0.20 16 6 H 0.11 -0.25 8.14 -51.93 -0.42 -0.67 16 7 C -0.11 0.06 5.14 -26.73 -0.14 -0.08 16 8 C -0.13 0.06 5.49 -26.73 -0.15 -0.09 16 9 C 0.14 -0.03 2.45 -67.93 -0.17 -0.20 16 10 H 0.09 0.19 7.58 -51.93 -0.39 -0.21 16 11 N -0.73 0.17 5.03 -54.81 -0.28 -0.11 16 12 C 0.57 1.80 7.73 -12.42 -0.10 1.70 16 13 O -0.54 -3.80 15.99 5.30 0.08 -3.71 16 14 C -0.17 -0.37 5.87 -104.97 -0.62 -0.98 16 15 C -0.07 0.04 9.46 -39.54 -0.37 -0.34 16 16 C -0.13 0.11 10.00 -39.86 -0.40 -0.29 16 17 C 0.12 0.04 7.27 -83.95 -0.61 -0.57 16 18 N -0.59 1.31 6.05 -10.61 -0.06 1.24 16 19 C 0.06 -0.14 10.43 -16.73 -0.17 -0.31 16 20 C -0.19 -0.08 5.58 -102.69 -0.57 -0.66 16 21 C -0.03 -0.01 3.06 36.01 0.11 0.10 16 22 O -0.54 -0.60 12.88 -35.23 -0.45 -1.05 16 23 Si 0.69 -1.07 30.76 -169.99 -5.23 -6.30 16 24 C -0.10 -0.23 6.34 -105.15 -0.67 -0.90 16 25 C 0.01 0.02 9.64 -38.86 -0.37 -0.35 16 26 C -0.13 0.27 5.39 -26.73 -0.14 0.12 16 27 C -0.10 0.07 4.49 -26.73 -0.12 -0.05 16 28 H 0.06 0.00 8.13 -51.93 -0.42 -0.43 16 29 H 0.06 0.01 8.13 -51.93 -0.42 -0.41 16 30 H 0.10 -0.26 8.14 -51.93 -0.42 -0.68 16 31 H 0.08 -0.06 8.11 -51.93 -0.42 -0.48 16 32 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 33 H 0.08 0.12 8.14 -51.93 -0.42 -0.30 16 34 H 0.07 -0.11 8.14 -51.93 -0.42 -0.54 16 35 H 0.40 -1.20 6.60 -40.82 -0.27 -1.47 16 36 H 0.13 -0.47 6.36 -52.49 -0.33 -0.80 16 37 H 0.13 -0.42 8.06 -52.48 -0.42 -0.84 16 38 H 0.42 -2.24 8.96 -40.82 -0.37 -2.60 16 39 H 0.18 -1.04 6.35 -52.49 -0.33 -1.38 16 40 H 0.11 0.17 7.96 -51.93 -0.41 -0.24 16 41 H 0.38 -1.18 8.70 45.56 0.40 -0.78 16 42 H -0.25 -0.54 7.11 56.52 0.40 -0.14 16 43 H -0.26 -0.21 7.11 56.52 0.40 0.19 16 44 H 0.14 0.64 7.64 -52.49 -0.40 0.24 16 45 H 0.07 -0.26 8.14 -51.93 -0.42 -0.68 16 46 H 0.08 -0.17 8.14 -51.93 -0.42 -0.60 16 47 H 0.08 -0.03 8.10 -51.93 -0.42 -0.45 16 48 H 0.08 0.05 8.10 -51.93 -0.42 -0.37 16 LS Contribution 395.70 15.07 5.96 5.96 Total: 0.00 -11.78 395.70 -10.88 -22.67 By element: Atomic # 1 Polarization: -7.24 SS G_CDS: -6.80 Total: -14.04 kcal Atomic # 6 Polarization: 2.70 SS G_CDS: -3.40 Total: -0.70 kcal Atomic # 7 Polarization: 1.47 SS G_CDS: -0.34 Total: 1.13 kcal Atomic # 8 Polarization: -7.66 SS G_CDS: -1.07 Total: -8.73 kcal Atomic # 14 Polarization: -1.07 SS G_CDS: -5.23 Total: -6.30 kcal Total LS contribution 5.96 Total: 5.96 kcal Total: -11.78 -10.88 -22.67 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14475160_13287722.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -77.248 kcal (2) G-P(sol) polarization free energy of solvation -11.785 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -89.033 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.884 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.668 kcal (6) G-S(sol) free energy of system = (1) + (5) -99.917 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 7.55 seconds