Wall clock time and date at job start Sun Mar 7 2021 01:36:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45206 * 1 3 3 C 1.34232 * 116.99878 * 2 1 4 4 O 1.20825 * 120.00049 * 0.02562 * 3 2 1 5 5 C 1.50695 * 119.99727 * 180.02562 * 3 2 1 6 6 H 1.09001 * 109.47646 * 60.00176 * 5 3 2 7 7 C 1.53009 * 109.47097 * 180.02562 * 5 3 2 8 8 C 1.52997 * 109.47123 * 179.97438 * 7 5 3 9 9 C 1.52997 * 109.47264 * 300.00205 * 8 7 5 10 10 H 1.09002 * 109.46856 * 299.99475 * 9 8 7 11 11 N 1.46502 * 109.46789 * 180.02562 * 9 8 7 12 12 C 1.34783 * 119.99925 * 154.99837 * 11 9 8 13 13 O 1.21283 * 119.99560 * 359.97438 * 12 11 9 14 14 C 1.50695 * 119.99929 * 179.97438 * 12 11 9 15 15 C 1.50698 * 109.47281 * 179.97438 * 14 12 11 16 16 C 1.34854 * 125.88944 * 85.02336 * 15 14 12 17 17 C 1.40892 * 107.41896 * 180.02562 * 16 15 14 18 18 C 1.34857 * 107.41490 * 0.02562 * 17 16 15 19 19 C 1.50698 * 125.88659 * 180.02562 * 18 17 16 20 20 O 1.42903 * 109.47201 * 119.97511 * 19 18 17 21 21 Si 1.86295 * 109.47539 * 359.97065 * 19 18 17 22 22 N 1.36338 * 125.89289 * 264.72432 * 15 14 12 23 23 C 1.52996 * 109.47342 * 60.00079 * 9 8 7 24 24 C 1.52997 * 109.46880 * 299.99761 * 23 9 8 25 25 H 1.09001 * 109.47157 * 179.97438 * 1 2 3 26 26 H 1.09004 * 109.47122 * 299.99817 * 1 2 3 27 27 H 1.09000 * 109.47070 * 59.99842 * 1 2 3 28 28 H 1.08995 * 109.46886 * 300.00093 * 7 5 3 29 29 H 1.09001 * 109.46838 * 59.99548 * 7 5 3 30 30 H 1.08997 * 109.46864 * 60.00221 * 8 7 5 31 31 H 1.08995 * 109.46777 * 179.97438 * 8 7 5 32 32 H 0.97001 * 120.00133 * 334.99011 * 11 9 8 33 33 H 1.09002 * 109.47138 * 300.00160 * 14 12 11 34 34 H 1.09000 * 109.46962 * 60.00513 * 14 12 11 35 35 H 1.07998 * 126.29041 * 359.97438 * 16 15 14 36 36 H 1.07995 * 126.29078 * 180.02562 * 17 16 15 37 37 H 1.09001 * 109.46687 * 239.96886 * 19 18 17 38 38 H 0.96700 * 114.00021 * 299.99422 * 20 19 18 39 39 H 1.48497 * 109.99928 * 180.02562 * 21 19 18 40 40 H 1.48502 * 109.99856 * 301.32167 * 21 19 18 41 41 H 0.97004 * 125.63782 * 359.97438 * 22 15 14 42 42 H 1.08997 * 109.47192 * 59.99735 * 23 9 8 43 43 H 1.09003 * 109.46861 * 180.02562 * 23 9 8 44 44 H 1.09001 * 109.47677 * 299.99994 * 24 23 9 45 45 H 1.09008 * 109.47127 * 180.02562 * 24 23 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4034 2.2093 0.0005 5 6 3.5663 1.2749 -0.0006 6 1 3.9558 0.7810 -0.8908 7 6 4.0002 2.7421 0.0002 8 6 5.5281 2.8222 0.0002 9 6 6.0751 2.1279 1.2491 10 1 5.6854 2.6217 2.1393 11 7 7.5381 2.2052 1.2493 12 6 8.2163 2.1383 2.4122 13 8 7.6153 2.0147 3.4583 14 6 9.7211 2.2172 2.4124 15 6 10.2291 2.1198 3.8278 16 6 10.4632 0.9785 4.5070 17 6 10.9263 1.3376 5.7882 18 6 10.9570 2.6846 5.8435 19 6 11.3895 3.5106 7.0274 20 8 12.5035 4.3259 6.6581 21 14 11.8822 2.3820 8.4253 22 7 10.5366 3.1702 4.6407 23 6 5.6413 0.6607 1.2483 24 6 4.1135 0.5807 1.2483 25 1 -0.3633 -1.0277 -0.0005 26 1 -0.3633 0.5138 0.8900 27 1 -0.3633 0.5139 -0.8900 28 1 3.6101 3.2368 -0.8893 29 1 3.6108 3.2357 0.8906 30 1 5.9177 2.3286 -0.8900 31 1 5.8371 3.8674 0.0003 32 1 8.0187 2.3043 0.4126 33 1 10.1281 1.3958 1.8226 34 1 10.0353 3.1665 1.9786 35 1 10.3210 -0.0261 4.1370 36 1 11.2054 0.6588 6.5805 37 1 10.5642 4.1466 7.3476 38 1 13.2761 3.8254 6.3619 39 1 12.3102 3.1845 9.5992 40 1 10.7418 1.5067 8.7975 41 1 10.4651 4.1081 4.4038 42 1 6.0310 0.1671 0.3580 43 1 6.0307 0.1663 2.1383 44 1 3.7237 1.0743 2.1386 45 1 3.8044 -0.4646 1.2482 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14475160_14644196.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:36:42 Heat of formation + Delta-G solvation = -119.617095 kcal Electronic energy + Delta-G solvation = -27053.058084 eV Core-core repulsion = 23037.350753 eV Total energy + Delta-G solvation = -4015.707331 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 323.161 amu Computer time = 6.39 seconds Orbital eigenvalues (eV) -42.28536 -41.76227 -40.76515 -39.00633 -37.67145 -37.40196 -35.28845 -33.24816 -32.01313 -31.84545 -31.22186 -29.31349 -28.45270 -25.45848 -24.44020 -23.93653 -22.16748 -21.64042 -21.27941 -21.13642 -20.72785 -18.93339 -18.57567 -18.16910 -17.79370 -17.47770 -17.33808 -16.70028 -16.35277 -16.21187 -15.61951 -15.38139 -15.16493 -14.97633 -14.91446 -14.53434 -14.35410 -14.14988 -14.03671 -13.95091 -13.84344 -13.75387 -13.46297 -13.37516 -13.04115 -12.83944 -12.65927 -12.44875 -12.32196 -11.99235 -11.87440 -11.78881 -11.67573 -11.48536 -11.29986 -10.84176 -10.60147 -10.09919 -9.70011 -8.87789 -4.95035 1.17424 1.20196 1.29405 1.63653 1.69644 1.74124 1.92646 2.02331 2.27723 2.52712 3.41125 3.46028 3.46798 3.59550 3.65377 3.82035 3.84802 3.94922 3.96345 4.03089 4.11236 4.16619 4.18940 4.23607 4.25105 4.30400 4.35504 4.46442 4.53251 4.58467 4.60758 4.65490 4.83489 4.85331 4.88933 4.98636 5.01468 5.13824 5.20033 5.33584 5.36977 5.39913 5.45062 6.07030 6.21609 6.42544 6.53921 6.67982 6.74498 7.22205 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.358 6.358 3 C 0.463 3.537 4 O -0.505 6.505 5 C -0.080 4.080 6 H 0.112 0.888 7 C -0.101 4.101 8 C -0.125 4.125 9 C 0.142 3.858 10 H 0.090 0.910 11 N -0.730 5.730 12 C 0.511 3.489 13 O -0.522 6.522 14 C -0.072 4.072 15 C 0.036 3.964 16 C -0.173 4.173 17 C -0.188 4.188 18 C -0.010 4.010 19 C -0.050 4.050 20 O -0.547 6.547 21 Si 0.720 3.280 22 N -0.535 5.535 23 C -0.127 4.127 24 C -0.109 4.109 25 H 0.103 0.897 26 H 0.064 0.936 27 H 0.064 0.936 28 H 0.080 0.920 29 H 0.076 0.924 30 H 0.073 0.927 31 H 0.077 0.923 32 H 0.401 0.599 33 H 0.117 0.883 34 H 0.099 0.901 35 H 0.136 0.864 36 H 0.141 0.859 37 H 0.110 0.890 38 H 0.381 0.619 39 H -0.256 1.256 40 H -0.255 1.255 41 H 0.412 0.588 42 H 0.070 0.930 43 H 0.076 0.924 44 H 0.071 0.929 45 H 0.083 0.917 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.747 -2.611 -5.223 6.938 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.275 6.275 3 C 0.306 3.694 4 O -0.392 6.392 5 C -0.099 4.099 6 H 0.130 0.870 7 C -0.139 4.139 8 C -0.163 4.163 9 C 0.038 3.962 10 H 0.108 0.892 11 N -0.382 5.382 12 C 0.297 3.703 13 O -0.396 6.396 14 C -0.113 4.113 15 C -0.078 4.078 16 C -0.197 4.197 17 C -0.213 4.213 18 C -0.124 4.124 19 C -0.160 4.160 20 O -0.352 6.352 21 Si 0.621 3.379 22 N -0.130 5.130 23 C -0.165 4.165 24 C -0.147 4.147 25 H 0.122 0.878 26 H 0.082 0.918 27 H 0.082 0.918 28 H 0.098 0.902 29 H 0.095 0.905 30 H 0.092 0.908 31 H 0.096 0.904 32 H 0.235 0.765 33 H 0.135 0.865 34 H 0.117 0.883 35 H 0.154 0.846 36 H 0.159 0.841 37 H 0.127 0.873 38 H 0.229 0.771 39 H -0.181 1.181 40 H -0.179 1.179 41 H 0.249 0.751 42 H 0.089 0.911 43 H 0.095 0.905 44 H 0.090 0.910 45 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges 2.492 -2.017 -3.477 4.729 hybrid contribution -0.684 0.855 -1.045 1.514 sum 1.808 -1.162 -4.522 5.007 Atomic orbital electron populations 1.23317 0.75966 1.03986 1.02701 1.86507 1.23706 1.33361 1.83891 1.23800 0.92032 0.81411 0.72158 1.90690 1.67208 1.36387 1.44926 1.21172 0.86978 0.99488 1.02308 0.87022 1.21395 0.94626 0.93473 1.04438 1.21808 0.95391 1.01574 0.97507 1.21037 0.79398 0.96189 0.99593 0.89229 1.46070 1.07280 1.75721 1.09160 1.20619 0.89770 0.76211 0.83713 1.90776 1.70220 1.47319 1.31298 1.20134 0.92167 1.05572 0.93407 1.19472 1.07680 0.87541 0.93102 1.20580 1.07370 0.97132 0.94658 1.20651 1.08961 0.92983 0.98670 1.20820 1.08879 0.94084 0.88584 1.24848 0.91106 0.99552 1.00514 1.86478 1.24306 1.36157 1.88297 0.94147 0.87712 0.80494 0.75593 1.41782 1.51606 1.08329 1.11272 1.21913 0.94815 0.96469 1.03345 1.21501 0.95566 1.01593 0.96024 0.87849 0.91760 0.91774 0.90170 0.90481 0.90805 0.90439 0.76509 0.86452 0.88254 0.84603 0.84135 0.87266 0.77149 1.18118 1.17926 0.75113 0.91128 0.90506 0.90978 0.89886 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.56 101.05 1.07 1.05 16 2 O -0.36 -0.52 10.47 -39.26 -0.41 -0.93 16 3 C 0.46 0.89 7.25 36.00 0.26 1.15 16 4 O -0.50 -2.46 15.73 -18.75 -0.29 -2.76 16 5 C -0.08 0.08 2.63 -91.77 -0.24 -0.16 16 6 H 0.11 -0.31 8.14 -51.93 -0.42 -0.73 16 7 C -0.10 0.12 4.49 -26.73 -0.12 0.00 16 8 C -0.12 0.37 5.39 -26.73 -0.14 0.23 16 9 C 0.14 -0.20 2.45 -67.93 -0.17 -0.36 16 10 H 0.09 0.11 7.58 -51.93 -0.39 -0.29 16 11 N -0.73 1.70 5.08 -53.81 -0.27 1.43 16 12 C 0.51 0.20 7.79 -10.98 -0.09 0.12 16 13 O -0.52 -2.76 15.70 5.55 0.09 -2.68 16 14 C -0.07 0.15 6.24 -29.04 -0.18 -0.03 16 15 C 0.04 0.04 5.66 -81.79 -0.46 -0.42 16 16 C -0.17 -0.37 10.76 -39.78 -0.43 -0.79 16 17 C -0.19 -0.36 9.37 -39.78 -0.37 -0.74 16 18 C -0.01 -0.02 6.51 -81.79 -0.53 -0.55 16 19 C -0.05 -0.03 3.08 36.00 0.11 0.08 16 20 O -0.55 -0.25 12.88 -35.23 -0.45 -0.71 16 21 Si 0.72 -0.27 30.58 -169.99 -5.20 -5.47 16 22 N -0.54 -0.63 6.07 -5.44 -0.03 -0.67 16 23 C -0.13 0.18 5.50 -26.73 -0.15 0.03 16 24 C -0.11 0.12 5.13 -26.73 -0.14 -0.02 16 25 H 0.10 -0.28 8.14 -51.93 -0.42 -0.71 16 26 H 0.06 -0.01 8.13 -51.93 -0.42 -0.43 16 27 H 0.06 -0.02 8.13 -51.93 -0.42 -0.44 16 28 H 0.08 -0.07 8.10 -51.93 -0.42 -0.49 16 29 H 0.08 0.02 8.10 -51.93 -0.42 -0.40 16 30 H 0.07 -0.32 8.14 -51.93 -0.42 -0.74 16 31 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 32 H 0.40 -2.12 8.60 -40.82 -0.35 -2.47 16 33 H 0.12 -0.51 8.14 -51.93 -0.42 -0.93 16 34 H 0.10 -0.43 8.14 -51.93 -0.42 -0.85 16 35 H 0.14 0.13 8.06 -52.49 -0.42 -0.30 16 36 H 0.14 0.03 6.22 -52.49 -0.33 -0.29 16 37 H 0.11 0.15 7.96 -51.93 -0.41 -0.26 16 38 H 0.38 -1.25 8.70 45.56 0.40 -0.85 16 39 H -0.26 -0.63 7.11 56.52 0.40 -0.23 16 40 H -0.25 -0.62 7.11 56.52 0.40 -0.22 16 41 H 0.41 -0.15 8.96 -40.82 -0.37 -0.51 16 42 H 0.07 -0.18 8.14 -51.93 -0.42 -0.61 16 43 H 0.08 0.05 8.14 -51.93 -0.42 -0.38 16 44 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 45 H 0.08 -0.10 8.11 -51.92 -0.42 -0.53 16 LS Contribution 373.48 15.07 5.63 5.63 Total: 0.00 -10.79 373.48 -9.52 -20.30 By element: Atomic # 1 Polarization: -6.76 SS G_CDS: -6.99 Total: -13.74 kcal Atomic # 6 Polarization: 1.17 SS G_CDS: -1.58 Total: -0.41 kcal Atomic # 7 Polarization: 1.07 SS G_CDS: -0.31 Total: 0.76 kcal Atomic # 8 Polarization: -6.00 SS G_CDS: -1.07 Total: -7.07 kcal Atomic # 14 Polarization: -0.27 SS G_CDS: -5.20 Total: -5.47 kcal Total LS contribution 5.63 Total: 5.63 kcal Total: -10.79 -9.52 -20.30 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14475160_14644196.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -99.312 kcal (2) G-P(sol) polarization free energy of solvation -10.789 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -110.101 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.516 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.305 kcal (6) G-S(sol) free energy of system = (1) + (5) -119.617 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 6.40 seconds