Wall clock time and date at job start Sun Mar 7 2021 01:37:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45202 * 1 3 3 C 1.34230 * 116.99836 * 2 1 4 4 O 1.20833 * 119.99930 * 359.97438 * 3 2 1 5 5 C 1.50697 * 120.00262 * 180.27336 * 3 2 1 6 6 H 1.09000 * 109.47461 * 59.71633 * 5 3 2 7 7 C 1.52996 * 109.47491 * 179.72204 * 5 3 2 8 8 C 1.53003 * 109.47301 * 179.97438 * 7 5 3 9 9 C 1.52996 * 109.46915 * 299.99916 * 8 7 5 10 10 H 1.08994 * 109.47269 * 299.99538 * 9 8 7 11 11 N 1.46507 * 109.46742 * 179.97438 * 9 8 7 12 12 C 1.34781 * 119.99696 * 155.00353 * 11 9 8 13 13 O 1.21628 * 120.00157 * 359.97438 * 12 11 9 14 14 C 1.47264 * 119.99888 * 179.97438 * 12 11 9 15 15 C 1.36330 * 126.96905 * 179.70695 * 14 12 11 16 16 C 1.51005 * 126.78804 * 0.71908 * 15 14 12 17 17 C 1.53395 * 108.30664 * 163.85084 * 16 15 14 18 18 C 1.53155 * 109.04287 * 48.25712 * 17 16 15 19 19 C 1.53130 * 109.52984 * 290.42784 * 18 17 16 20 20 N 1.35210 * 108.66084 * 179.86146 * 15 14 12 21 21 C 1.36425 * 109.89754 * 0.41699 * 20 15 14 22 22 C 1.50698 * 125.49156 * 179.71462 * 21 20 15 23 23 O 1.42901 * 109.47241 * 330.01381 * 22 21 20 24 24 Si 1.86302 * 109.47220 * 210.01469 * 22 21 20 25 25 C 1.34488 * 109.01291 * 359.74831 * 21 20 15 26 26 C 1.53003 * 109.47207 * 60.00200 * 9 8 7 27 27 C 1.53002 * 109.46796 * 299.72392 * 5 3 2 28 28 H 1.08998 * 109.47630 * 300.00638 * 1 2 3 29 29 H 1.09004 * 109.46770 * 60.01042 * 1 2 3 30 30 H 1.09001 * 109.46882 * 180.02562 * 1 2 3 31 31 H 1.09004 * 109.47066 * 299.99799 * 7 5 3 32 32 H 1.08994 * 109.47405 * 59.99969 * 7 5 3 33 33 H 1.09008 * 109.46785 * 59.99617 * 8 7 5 34 34 H 1.09001 * 109.47245 * 179.97438 * 8 7 5 35 35 H 0.96995 * 119.99837 * 334.99817 * 11 9 8 36 36 H 1.09000 * 109.86472 * 44.03645 * 16 15 14 37 37 H 1.08999 * 109.52564 * 283.46621 * 16 15 14 38 38 H 1.08996 * 109.54922 * 288.38561 * 17 16 15 39 39 H 1.09008 * 109.61153 * 168.16746 * 17 16 15 40 40 H 1.08998 * 109.46383 * 170.41028 * 18 17 16 41 41 H 1.09000 * 109.45167 * 50.43452 * 18 17 16 42 42 H 1.09002 * 109.55963 * 291.13897 * 19 18 17 43 43 H 1.09002 * 109.56633 * 170.80952 * 19 18 17 44 44 H 1.09002 * 109.47052 * 90.01406 * 22 21 20 45 45 H 0.96701 * 114.00122 * 299.99997 * 23 22 21 46 46 H 1.48500 * 110.00148 * 180.02562 * 24 22 21 47 47 H 1.48506 * 109.99844 * 301.32066 * 24 22 21 48 48 H 1.08005 * 126.81641 * 180.02562 * 25 21 20 49 49 H 1.08994 * 109.47116 * 59.99825 * 26 9 8 50 50 H 1.09004 * 109.47205 * 179.97438 * 26 9 8 51 51 H 1.09008 * 109.46845 * 299.99275 * 27 5 3 52 52 H 1.08993 * 109.47452 * 60.00035 * 27 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4032 2.2094 -0.0005 5 6 3.5663 1.2750 -0.0062 6 1 3.9525 0.7785 -0.8964 7 6 4.0000 2.7422 -0.0119 8 6 5.5279 2.8223 -0.0176 9 6 6.0794 2.1323 1.2316 10 1 5.6929 2.6289 2.1216 11 7 7.5425 2.2085 1.2259 12 6 8.2251 2.1454 2.3863 13 8 7.6265 2.0256 3.4383 14 6 9.6958 2.2215 2.3805 15 6 10.5233 2.1780 3.4631 16 6 10.1139 2.0268 4.9087 17 6 11.3518 1.6247 5.7205 18 6 12.5129 2.5541 5.3545 19 6 12.9725 2.2600 3.9237 20 7 11.8020 2.2746 3.0344 21 6 11.8285 2.3913 1.6754 22 6 13.0706 2.5276 0.8330 23 8 14.0863 3.1933 1.5861 24 14 12.6793 3.5197 -0.6945 25 6 10.5674 2.3659 1.2087 26 6 5.6457 0.6651 1.2373 27 6 4.1183 0.5848 1.2427 28 1 -0.3634 0.5139 0.8899 29 1 -0.3633 0.5137 -0.8901 30 1 -0.3633 -1.0277 0.0005 31 1 3.6067 3.2339 -0.9017 32 1 3.6139 3.2387 0.8782 33 1 5.9145 2.3256 -0.9076 34 1 5.8369 3.8676 -0.0221 35 1 8.0198 2.3044 0.3869 36 1 9.3491 1.2553 4.9983 37 1 9.7243 2.9753 5.2781 38 1 11.6220 0.5948 5.4876 39 1 11.1357 1.7132 6.7852 40 1 13.3413 2.3889 6.0432 41 1 12.1838 3.5909 5.4242 42 1 13.4466 1.2791 3.8870 43 1 13.6830 3.0226 3.6045 44 1 13.4232 1.5378 0.5429 45 1 13.8407 4.0819 1.8781 46 1 13.8960 3.6608 -1.5341 47 1 11.6018 2.8542 -1.4702 48 1 10.2577 2.4371 0.1765 49 1 6.0323 0.1685 0.3474 50 1 6.0390 0.1733 2.1271 51 1 3.7321 1.0813 2.1329 52 1 3.8094 -0.4605 1.2467 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14475160_16915396.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:37:14 Heat of formation + Delta-G solvation = -123.361925 kcal Electronic energy + Delta-G solvation = -33510.481213 eV Core-core repulsion = 29055.310115 eV Total energy + Delta-G solvation = -4455.171098 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 363.192 amu Computer time = 4.93 seconds Orbital eigenvalues (eV) -42.76240 -41.68123 -40.45663 -38.77893 -38.05557 -37.33007 -36.91473 -35.06293 -33.45198 -31.90459 -31.37433 -31.10045 -29.36479 -28.43173 -26.59442 -25.00653 -24.69050 -23.81130 -23.39202 -21.81397 -21.76669 -21.13352 -20.65021 -19.56938 -18.86699 -18.47894 -17.74324 -17.43679 -17.26720 -17.04238 -16.72414 -16.46895 -16.10624 -15.84052 -15.47414 -15.39281 -15.23404 -15.12799 -14.97198 -14.85870 -14.65637 -14.58727 -14.23894 -14.13719 -13.95298 -13.78749 -13.56570 -13.28203 -13.27641 -12.98437 -12.79720 -12.58450 -12.36513 -12.33284 -12.20819 -12.09688 -12.03757 -11.85963 -11.80756 -11.72796 -11.56135 -11.36615 -11.20361 -10.76557 -10.59095 -9.90239 -9.52315 -8.98764 -5.08854 0.88112 1.00211 1.26641 1.35508 1.56719 1.74446 1.77366 1.96760 2.47004 2.74202 3.13605 3.42999 3.51188 3.52610 3.58965 3.65492 3.71390 3.76566 3.78683 3.94730 4.09907 4.16750 4.20661 4.23153 4.25944 4.28956 4.31058 4.31921 4.36471 4.39413 4.40365 4.42360 4.56854 4.62131 4.65718 4.69743 4.74218 4.75938 4.81773 4.88414 4.97541 5.00502 5.04789 5.09991 5.11835 5.16428 5.19971 5.27282 5.34724 5.47085 5.67866 5.77619 6.06286 6.23408 6.31466 6.77259 6.80824 7.54962 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.358 6.358 3 C 0.464 3.536 4 O -0.505 6.505 5 C -0.081 4.081 6 H 0.111 0.889 7 C -0.100 4.100 8 C -0.126 4.126 9 C 0.145 3.855 10 H 0.091 0.909 11 N -0.726 5.726 12 C 0.595 3.405 13 O -0.548 6.548 14 C -0.234 4.234 15 C 0.121 3.879 16 C -0.055 4.055 17 C -0.130 4.130 18 C -0.139 4.139 19 C 0.099 3.901 20 N -0.425 5.425 21 C -0.011 4.011 22 C -0.045 4.045 23 O -0.543 6.543 24 Si 0.718 3.282 25 C -0.168 4.168 26 C -0.127 4.127 27 C -0.108 4.108 28 H 0.064 0.936 29 H 0.063 0.937 30 H 0.102 0.898 31 H 0.079 0.921 32 H 0.077 0.923 33 H 0.071 0.929 34 H 0.078 0.922 35 H 0.399 0.601 36 H 0.100 0.900 37 H 0.088 0.912 38 H 0.067 0.933 39 H 0.079 0.921 40 H 0.088 0.912 41 H 0.075 0.925 42 H 0.081 0.919 43 H 0.107 0.893 44 H 0.116 0.884 45 H 0.380 0.620 46 H -0.253 1.253 47 H -0.252 1.252 48 H 0.147 0.853 49 H 0.068 0.932 50 H 0.076 0.924 51 H 0.072 0.928 52 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.244 0.763 -0.917 3.456 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.275 6.275 3 C 0.306 3.694 4 O -0.392 6.392 5 C -0.100 4.100 6 H 0.129 0.871 7 C -0.138 4.138 8 C -0.163 4.163 9 C 0.040 3.960 10 H 0.109 0.891 11 N -0.376 5.376 12 C 0.385 3.615 13 O -0.427 6.427 14 C -0.244 4.244 15 C 0.003 3.997 16 C -0.093 4.093 17 C -0.167 4.167 18 C -0.176 4.176 19 C -0.022 4.022 20 N -0.102 5.102 21 C -0.120 4.120 22 C -0.155 4.155 23 O -0.349 6.349 24 Si 0.617 3.383 25 C -0.193 4.193 26 C -0.166 4.166 27 C -0.146 4.146 28 H 0.082 0.918 29 H 0.082 0.918 30 H 0.121 0.879 31 H 0.097 0.903 32 H 0.096 0.904 33 H 0.090 0.910 34 H 0.097 0.903 35 H 0.233 0.767 36 H 0.118 0.882 37 H 0.107 0.893 38 H 0.086 0.914 39 H 0.098 0.902 40 H 0.106 0.894 41 H 0.094 0.906 42 H 0.099 0.901 43 H 0.125 0.875 44 H 0.133 0.867 45 H 0.227 0.773 46 H -0.178 1.178 47 H -0.177 1.177 48 H 0.164 0.836 49 H 0.087 0.913 50 H 0.095 0.905 51 H 0.091 0.909 52 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges 3.207 0.423 -0.969 3.377 hybrid contribution 0.047 -0.632 -0.227 0.673 sum 3.254 -0.209 -1.196 3.473 Atomic orbital electron populations 1.23307 0.76055 1.03925 1.02680 1.86509 1.23638 1.33426 1.83917 1.23830 0.92057 0.81373 0.72111 1.90689 1.67212 1.36376 1.44955 1.21178 0.86841 0.99621 1.02322 0.87109 1.21391 0.94730 0.93345 1.04379 1.21817 0.95211 1.01732 0.97588 1.20992 0.79526 0.95931 0.99523 0.89061 1.45812 1.06820 1.75831 1.09141 1.17311 0.85732 0.75144 0.83354 1.90767 1.70311 1.50536 1.31061 1.19828 0.92082 1.19725 0.92734 1.20390 0.82804 1.00666 0.95841 1.20509 0.97851 1.04006 0.86906 1.21729 0.94513 0.99567 1.00936 1.21939 0.99724 1.01155 0.94811 1.22303 0.86362 1.04362 0.89134 1.43862 1.06012 1.54764 1.05525 1.20636 0.96441 1.11597 0.83285 1.24883 0.85888 1.02562 1.02176 1.86487 1.40808 1.33411 1.74182 0.94091 0.80744 0.88724 0.74694 1.21736 0.90770 1.08928 0.97851 1.21918 0.94619 0.96762 1.03285 1.21490 0.95662 1.01461 0.95997 0.91769 0.91802 0.87916 0.90273 0.90426 0.90982 0.90299 0.76691 0.88213 0.89340 0.91407 0.90202 0.89355 0.90584 0.90100 0.87545 0.86666 0.77259 1.17778 1.17664 0.83578 0.91330 0.90533 0.90929 0.90055 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.00 10.56 101.05 1.07 1.06 16 2 O -0.36 -0.66 10.48 -39.26 -0.41 -1.07 16 3 C 0.46 1.08 7.25 36.00 0.26 1.34 16 4 O -0.51 -2.62 15.73 -18.76 -0.30 -2.92 16 5 C -0.08 0.03 2.63 -91.77 -0.24 -0.21 16 6 H 0.11 -0.22 8.14 -51.93 -0.42 -0.64 16 7 C -0.10 0.06 4.49 -26.73 -0.12 -0.06 16 8 C -0.13 0.23 5.39 -26.73 -0.14 0.09 16 9 C 0.14 -0.01 2.46 -67.93 -0.17 -0.17 16 10 H 0.09 0.18 7.58 -51.93 -0.39 -0.21 16 11 N -0.73 -0.23 5.07 -54.93 -0.28 -0.51 16 12 C 0.60 1.91 7.77 -12.59 -0.10 1.81 16 13 O -0.55 -3.36 15.00 5.25 0.08 -3.28 16 14 C -0.23 -0.55 6.28 -103.48 -0.65 -1.20 16 15 C 0.12 0.24 6.57 -81.64 -0.54 -0.30 16 16 C -0.06 -0.06 5.32 -27.53 -0.15 -0.20 16 17 C -0.13 0.14 5.98 -26.45 -0.16 -0.01 16 18 C -0.14 0.32 5.92 -26.58 -0.16 0.16 16 19 C 0.10 -0.15 6.21 -3.69 -0.02 -0.17 16 20 N -0.43 -0.18 3.11 -107.37 -0.33 -0.52 16 21 C -0.01 0.00 6.15 -81.88 -0.50 -0.50 16 22 C -0.04 0.06 3.00 36.00 0.11 0.17 16 23 O -0.54 0.96 10.28 -35.23 -0.36 0.60 16 24 Si 0.72 -1.70 31.29 -169.99 -5.32 -7.01 16 25 C -0.17 -0.07 9.08 -37.47 -0.34 -0.41 16 26 C -0.13 0.03 5.49 -26.75 -0.15 -0.12 16 27 C -0.11 0.05 5.13 -26.75 -0.14 -0.09 16 28 H 0.06 0.01 8.13 -51.93 -0.42 -0.42 16 29 H 0.06 0.00 8.13 -51.93 -0.42 -0.43 16 30 H 0.10 -0.25 8.14 -51.93 -0.42 -0.67 16 31 H 0.08 -0.02 8.10 -51.93 -0.42 -0.44 16 32 H 0.08 0.05 8.10 -51.93 -0.42 -0.37 16 33 H 0.07 -0.22 8.14 -51.92 -0.42 -0.64 16 34 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 35 H 0.40 -0.71 7.73 -40.82 -0.32 -1.03 16 36 H 0.10 0.24 7.40 -51.93 -0.38 -0.14 16 37 H 0.09 0.10 8.14 -51.93 -0.42 -0.32 16 38 H 0.07 -0.04 8.12 -51.93 -0.42 -0.46 16 39 H 0.08 -0.15 8.14 -51.92 -0.42 -0.58 16 40 H 0.09 -0.31 8.14 -51.93 -0.42 -0.73 16 41 H 0.08 -0.16 8.11 -51.93 -0.42 -0.58 16 42 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 43 H 0.11 -0.29 5.68 -51.93 -0.29 -0.58 16 44 H 0.12 -0.10 7.96 -51.93 -0.41 -0.51 16 45 H 0.38 -1.93 8.27 45.56 0.38 -1.55 16 46 H -0.25 -0.19 7.11 56.52 0.40 0.21 16 47 H -0.25 0.16 6.77 56.52 0.38 0.54 16 48 H 0.15 -0.21 6.30 -52.48 -0.33 -0.54 16 49 H 0.07 -0.07 8.14 -51.93 -0.42 -0.50 16 50 H 0.08 0.13 8.14 -51.93 -0.42 -0.29 16 51 H 0.07 0.03 8.14 -51.92 -0.42 -0.40 16 52 H 0.08 -0.05 8.12 -51.93 -0.42 -0.47 16 LS Contribution 407.83 15.07 6.15 6.15 Total: 0.00 -8.77 407.83 -11.48 -20.26 By element: Atomic # 1 Polarization: -4.30 SS G_CDS: -8.57 Total: -12.87 kcal Atomic # 6 Polarization: 3.31 SS G_CDS: -2.13 Total: 1.17 kcal Atomic # 7 Polarization: -0.41 SS G_CDS: -0.61 Total: -1.02 kcal Atomic # 8 Polarization: -5.68 SS G_CDS: -0.99 Total: -6.67 kcal Atomic # 14 Polarization: -1.70 SS G_CDS: -5.32 Total: -7.01 kcal Total LS contribution 6.15 Total: 6.15 kcal Total: -8.77 -11.48 -20.26 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14475160_16915396.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -103.106 kcal (2) G-P(sol) polarization free energy of solvation -8.774 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -111.880 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.482 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.256 kcal (6) G-S(sol) free energy of system = (1) + (5) -123.362 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 4.94 seconds