Wall clock time and date at job start Sun Mar 7 2021 01:38:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45202 * 1 3 3 C 1.34227 * 117.00097 * 2 1 4 4 O 1.20833 * 119.99935 * 0.02562 * 3 2 1 5 5 C 1.50701 * 120.00509 * 180.02562 * 3 2 1 6 6 H 1.09006 * 109.46794 * 60.00045 * 5 3 2 7 7 C 1.52995 * 109.47178 * 180.02562 * 5 3 2 8 8 C 1.53007 * 109.46792 * 180.02562 * 7 5 3 9 9 C 1.53000 * 109.46865 * 299.99832 * 8 7 5 10 10 H 1.09006 * 109.47164 * 300.00135 * 9 8 7 11 11 N 1.46502 * 109.47036 * 180.02562 * 9 8 7 12 12 C 1.34778 * 119.99752 * 155.00112 * 11 9 8 13 13 O 1.21276 * 120.00464 * 359.97438 * 12 11 9 14 14 C 1.50699 * 119.99560 * 179.97438 * 12 11 9 15 15 O 1.42900 * 109.47102 * 179.97438 * 14 12 11 16 16 C 1.35895 * 117.00006 * 179.97438 * 15 14 12 17 17 C 1.38709 * 120.05636 * 180.02562 * 16 15 14 18 18 N 1.48006 * 120.03027 * 359.97438 * 17 16 15 19 19 O 1.21796 * 120.00501 * 179.97438 * 18 17 16 20 20 O 1.21807 * 119.99592 * 0.02562 * 18 17 16 21 21 C 1.38170 * 119.94701 * 179.70967 * 17 16 15 22 22 C 1.38239 * 120.05299 * 0.54205 * 21 17 16 23 23 C 1.50694 * 119.94726 * 179.72660 * 22 21 17 24 24 O 1.42901 * 109.47118 * 64.72722 * 23 22 21 25 25 Si 1.86298 * 109.47775 * 184.72966 * 23 22 21 26 26 C 1.38290 * 120.11115 * 359.46012 * 22 21 17 27 27 C 1.38121 * 120.05580 * 0.26504 * 26 22 21 28 28 C 1.52999 * 109.47264 * 60.00098 * 9 8 7 29 29 C 1.52998 * 109.47071 * 299.99928 * 28 9 8 30 30 H 1.09000 * 109.46991 * 299.99719 * 1 2 3 31 31 H 1.08999 * 109.47313 * 59.99865 * 1 2 3 32 32 H 1.09000 * 109.46968 * 180.02562 * 1 2 3 33 33 H 1.08992 * 109.47335 * 60.00366 * 7 5 3 34 34 H 1.08998 * 109.47644 * 299.99704 * 7 5 3 35 35 H 1.09002 * 109.46479 * 180.02562 * 8 7 5 36 36 H 1.08992 * 109.47235 * 59.99873 * 8 7 5 37 37 H 0.96998 * 119.99889 * 334.99607 * 11 9 8 38 38 H 1.09000 * 109.47572 * 59.99887 * 14 12 11 39 39 H 1.09001 * 109.47448 * 299.99693 * 14 12 11 40 40 H 1.08007 * 119.97412 * 180.29535 * 21 17 16 41 41 H 1.09004 * 109.47407 * 304.73078 * 23 22 21 42 42 H 0.96708 * 114.00246 * 180.02562 * 24 23 22 43 43 H 1.48506 * 109.99834 * 300.00486 * 25 23 22 44 44 H 1.48502 * 110.00011 * 61.31751 * 25 23 22 45 45 H 1.08005 * 119.96959 * 180.25308 * 26 22 21 46 46 H 1.07996 * 120.02606 * 179.97438 * 27 26 22 47 47 H 1.08998 * 109.46720 * 60.00112 * 28 9 8 48 48 H 1.09000 * 109.46961 * 179.97438 * 28 9 8 49 49 H 1.08998 * 109.47498 * 299.99707 * 29 28 9 50 50 H 1.09000 * 109.47182 * 179.97438 * 29 28 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2094 0.0005 5 6 3.5664 1.2749 -0.0006 6 1 3.9557 0.7810 -0.8909 7 6 4.0001 2.7421 0.0002 8 6 5.5280 2.8222 -0.0011 9 6 6.0761 2.1277 1.2472 10 1 5.6871 2.6212 2.1379 11 7 7.5391 2.2049 1.2464 12 6 8.2181 2.1377 2.4087 13 8 7.6180 2.0139 3.4553 14 6 9.7230 2.2166 2.4077 15 8 10.2057 2.1239 3.7496 16 6 11.5520 2.1783 3.9260 17 6 12.0894 2.0936 5.2020 18 7 11.1969 1.9446 6.3732 19 8 11.6693 1.8698 7.4933 20 8 9.9899 1.8956 6.2168 21 6 13.4589 2.1432 5.3783 22 6 14.2929 2.2882 4.2853 23 6 15.7858 2.3481 4.4809 24 8 16.2490 1.0991 4.9982 25 14 16.6133 2.6886 2.8469 26 6 13.7596 2.3728 3.0122 27 6 12.3915 2.3181 2.8302 28 6 5.6423 0.6605 1.2465 29 6 4.1144 0.5804 1.2477 30 1 -0.3633 0.5138 0.8900 31 1 -0.3634 0.5138 -0.8899 32 1 -0.3633 -1.0277 0.0005 33 1 3.6108 3.2356 0.8906 34 1 3.6100 3.2369 -0.8893 35 1 5.8370 3.8675 0.0000 36 1 5.9170 2.3288 -0.8917 37 1 8.0190 2.3043 0.4093 38 1 10.0369 3.1659 1.9739 39 1 10.1295 1.3953 1.8175 40 1 13.8781 2.0725 6.3712 41 1 16.0285 3.1449 5.1840 42 1 17.2036 1.0656 5.1495 43 1 16.2902 1.6093 1.8793 44 1 16.1641 3.9998 2.3136 45 1 14.4135 2.4820 2.1595 46 1 11.9756 2.3847 1.8357 47 1 6.0313 0.1671 0.3558 48 1 6.0331 0.1656 2.1356 49 1 3.7254 1.0738 2.1383 50 1 3.8053 -0.4648 1.2467 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14475160_4549638.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:38:41 Heat of formation + Delta-G solvation = -155.927378 kcal Electronic energy + Delta-G solvation = -36693.518173 eV Core-core repulsion = 31463.737453 eV Total energy + Delta-G solvation = -5229.780720 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 395.160 amu Computer time = 1.41 seconds Orbital eigenvalues (eV) -43.03040 -41.89555 -41.67375 -40.90926 -39.70394 -38.85893 -37.58431 -37.40320 -37.12989 -35.43778 -33.57853 -32.53602 -32.07564 -31.75926 -29.73230 -28.46151 -27.60796 -26.69428 -24.95064 -23.98747 -23.95808 -22.72491 -22.06808 -21.71109 -20.93656 -20.40206 -19.48387 -19.16892 -18.73871 -18.61589 -18.48420 -18.31767 -17.79639 -17.69325 -17.54316 -17.38908 -17.14412 -16.62857 -16.07719 -16.01463 -15.67476 -15.41812 -15.29378 -15.14755 -14.98442 -14.60236 -14.46374 -14.27117 -14.12631 -13.99227 -13.86897 -13.68783 -13.42620 -13.10465 -13.04848 -12.86229 -12.73021 -12.56159 -12.46831 -12.35521 -12.21456 -12.20472 -11.81497 -11.79899 -11.73803 -11.70821 -11.52786 -11.32341 -10.94852 -10.94760 -10.63427 -10.24763 -9.91261 -5.23871 -1.14772 -0.39327 0.36920 0.51777 0.98351 1.05475 1.19629 1.36986 1.38922 1.64209 1.69643 1.89905 2.16447 2.87904 2.99948 3.08452 3.31050 3.37738 3.41802 3.46443 3.52035 3.53112 3.58954 3.63840 3.71708 3.78622 3.92547 4.03351 4.08446 4.12843 4.13375 4.17702 4.19041 4.24981 4.26740 4.27009 4.38770 4.47222 4.57086 4.63501 4.66494 4.80014 4.85106 4.89828 4.95543 4.99342 5.09479 5.13648 5.28178 5.40798 5.43177 5.69258 6.22212 6.37532 6.74023 6.93952 7.00623 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.358 6.358 3 C 0.463 3.537 4 O -0.505 6.505 5 C -0.081 4.081 6 H 0.111 0.889 7 C -0.101 4.101 8 C -0.124 4.124 9 C 0.144 3.856 10 H 0.095 0.905 11 N -0.724 5.724 12 C 0.515 3.485 13 O -0.493 6.493 14 C 0.030 3.970 15 O -0.252 6.252 16 C 0.200 3.800 17 C -0.074 4.074 18 N 0.029 4.971 19 O -0.175 6.175 20 O -0.117 6.117 21 C 0.013 3.987 22 C -0.111 4.111 23 C -0.071 4.071 24 O -0.545 6.545 25 Si 0.690 3.310 26 C -0.031 4.031 27 C -0.208 4.208 28 C -0.129 4.129 29 C -0.109 4.109 30 H 0.064 0.936 31 H 0.064 0.936 32 H 0.103 0.897 33 H 0.078 0.922 34 H 0.080 0.920 35 H 0.079 0.921 36 H 0.073 0.927 37 H 0.401 0.599 38 H 0.101 0.899 39 H 0.101 0.899 40 H 0.166 0.834 41 H 0.082 0.918 42 H 0.388 0.612 43 H -0.248 1.248 44 H -0.251 1.251 45 H 0.141 0.859 46 H 0.156 0.844 47 H 0.070 0.930 48 H 0.078 0.922 49 H 0.074 0.926 50 H 0.083 0.917 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.602 0.347 -9.206 11.944 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.275 6.275 3 C 0.306 3.694 4 O -0.392 6.392 5 C -0.100 4.100 6 H 0.129 0.871 7 C -0.139 4.139 8 C -0.162 4.162 9 C 0.040 3.960 10 H 0.113 0.887 11 N -0.378 5.378 12 C 0.298 3.702 13 O -0.365 6.365 14 C -0.049 4.049 15 O -0.161 6.161 16 C 0.151 3.849 17 C -0.159 4.159 18 N 0.549 4.451 19 O -0.384 6.384 20 O -0.341 6.341 21 C -0.006 4.006 22 C -0.113 4.113 23 C -0.181 4.181 24 O -0.352 6.352 25 Si 0.591 3.409 26 C -0.049 4.049 27 C -0.227 4.227 28 C -0.167 4.167 29 C -0.147 4.147 30 H 0.083 0.917 31 H 0.082 0.918 32 H 0.122 0.878 33 H 0.097 0.903 34 H 0.099 0.901 35 H 0.097 0.903 36 H 0.092 0.908 37 H 0.236 0.764 38 H 0.119 0.881 39 H 0.119 0.881 40 H 0.183 0.817 41 H 0.100 0.900 42 H 0.236 0.764 43 H -0.172 1.172 44 H -0.176 1.176 45 H 0.158 0.842 46 H 0.174 0.826 47 H 0.089 0.911 48 H 0.096 0.904 49 H 0.092 0.908 50 H 0.102 0.898 Dipole moment (debyes) X Y Z Total from point charges 6.472 0.612 -9.683 11.663 hybrid contribution -0.544 0.076 -0.104 0.559 sum 5.928 0.687 -9.787 11.463 Atomic orbital electron populations 1.23319 0.75924 1.04001 1.02723 1.86503 1.23739 1.33347 1.83880 1.23779 0.92003 0.81429 0.72193 1.90695 1.67198 1.36374 1.44895 1.21171 0.87059 0.99456 1.02291 0.87059 1.21395 0.94432 0.93523 1.04594 1.21813 0.95542 1.01615 0.97271 1.21117 0.78301 0.96489 1.00092 0.88689 1.45852 1.07617 1.75895 1.08475 1.19790 0.88139 0.77722 0.84555 1.90869 1.69428 1.45469 1.30731 1.22751 0.94235 1.04456 0.83459 1.86502 1.16472 1.85380 1.27776 1.18645 0.83945 0.90725 0.91617 1.20570 0.90962 1.20322 0.84014 1.43303 1.01727 0.98338 1.01687 1.94550 1.79793 1.54752 1.09331 1.94699 0.95674 1.51528 1.92190 1.20817 0.88552 0.89370 1.01882 1.19233 0.94748 1.05243 0.92043 1.24644 0.92680 0.90166 1.10631 1.86497 1.28837 1.32521 1.87332 0.94647 0.90755 0.80241 0.75282 1.21144 0.94879 0.92128 0.96702 1.21205 0.93482 1.09680 0.98315 1.21930 0.95073 0.96254 1.03450 1.21500 0.95328 1.01721 0.96148 0.91719 0.91772 0.87847 0.90299 0.90092 0.90275 0.90790 0.76447 0.88099 0.88073 0.81654 0.89972 0.76394 1.17213 1.17556 0.84229 0.82622 0.91113 0.90366 0.90756 0.89796 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.56 101.05 1.07 1.05 16 2 O -0.36 -0.49 10.47 -39.25 -0.41 -0.90 16 3 C 0.46 0.80 7.26 36.01 0.26 1.06 16 4 O -0.50 -2.37 15.73 -18.76 -0.30 -2.66 16 5 C -0.08 0.11 2.63 -91.77 -0.24 -0.13 16 6 H 0.11 -0.34 8.14 -51.93 -0.42 -0.77 16 7 C -0.10 0.17 4.49 -26.73 -0.12 0.05 16 8 C -0.12 0.44 5.39 -26.73 -0.14 0.30 16 9 C 0.14 -0.27 2.45 -67.93 -0.17 -0.43 16 10 H 0.10 0.06 7.58 -51.93 -0.39 -0.33 16 11 N -0.72 2.10 5.08 -53.80 -0.27 1.83 16 12 C 0.51 0.25 7.87 -10.99 -0.09 0.17 16 13 O -0.49 -2.95 16.16 -14.35 -0.23 -3.18 16 14 C 0.03 -0.06 5.22 36.01 0.19 0.13 16 15 O -0.25 -0.71 7.68 -49.76 -0.38 -1.09 16 16 C 0.20 0.37 6.67 -39.22 -0.26 0.11 16 17 C -0.07 -0.28 6.87 -79.80 -0.55 -0.83 16 18 N 0.03 0.21 4.45 34.03 0.15 0.36 16 19 O -0.18 -1.33 18.45 -29.46 -0.54 -1.87 16 20 O -0.12 -1.05 17.24 -36.49 -0.63 -1.68 16 21 C 0.01 0.02 9.18 -39.61 -0.36 -0.34 16 22 C -0.11 0.00 5.39 -104.61 -0.56 -0.56 16 23 C -0.07 0.17 2.79 36.00 0.10 0.27 16 24 O -0.54 0.95 12.81 -35.23 -0.45 0.49 16 25 Si 0.69 -2.64 29.85 -169.99 -5.07 -7.71 16 26 C -0.03 0.03 8.66 -39.61 -0.34 -0.31 16 27 C -0.21 0.31 9.04 -39.43 -0.36 -0.05 16 28 C -0.13 0.22 5.50 -26.73 -0.15 0.07 16 29 C -0.11 0.15 5.14 -26.73 -0.14 0.01 16 30 H 0.06 -0.01 8.13 -51.93 -0.42 -0.43 16 31 H 0.06 -0.03 8.13 -51.93 -0.42 -0.45 16 32 H 0.10 -0.28 8.14 -51.93 -0.42 -0.71 16 33 H 0.08 -0.02 8.10 -51.93 -0.42 -0.44 16 34 H 0.08 -0.10 8.10 -51.93 -0.42 -0.52 16 35 H 0.08 -0.29 8.14 -51.93 -0.42 -0.72 16 36 H 0.07 -0.37 8.14 -51.93 -0.42 -0.79 16 37 H 0.40 -2.55 8.60 -40.82 -0.35 -2.91 16 38 H 0.10 -0.53 7.66 -51.93 -0.40 -0.93 16 39 H 0.10 -0.52 7.66 -51.93 -0.40 -0.92 16 40 H 0.17 0.18 7.61 -52.48 -0.40 -0.22 16 41 H 0.08 -0.33 7.96 -51.93 -0.41 -0.74 16 42 H 0.39 -2.59 8.74 45.56 0.40 -2.19 16 43 H -0.25 0.29 7.05 56.52 0.40 0.69 16 44 H -0.25 0.44 7.11 56.52 0.40 0.84 16 45 H 0.14 -0.38 4.86 -52.48 -0.26 -0.64 16 46 H 0.16 -0.82 6.30 -52.49 -0.33 -1.15 16 47 H 0.07 -0.21 8.14 -51.93 -0.42 -0.64 16 48 H 0.08 0.03 8.14 -51.93 -0.42 -0.39 16 49 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 50 H 0.08 -0.12 8.11 -51.93 -0.42 -0.54 16 LS Contribution 421.72 15.07 6.36 6.36 Total: 0.00 -14.38 421.72 -10.45 -24.83 By element: Atomic # 1 Polarization: -8.53 SS G_CDS: -6.81 Total: -15.34 kcal Atomic # 6 Polarization: 2.43 SS G_CDS: -1.86 Total: 0.56 kcal Atomic # 7 Polarization: 2.31 SS G_CDS: -0.12 Total: 2.18 kcal Atomic # 8 Polarization: -7.94 SS G_CDS: -2.94 Total: -10.89 kcal Atomic # 14 Polarization: -2.64 SS G_CDS: -5.07 Total: -7.71 kcal Total LS contribution 6.36 Total: 6.36 kcal Total: -14.38 -10.45 -24.83 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14475160_4549638.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -131.095 kcal (2) G-P(sol) polarization free energy of solvation -14.379 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -145.473 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.454 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.833 kcal (6) G-S(sol) free energy of system = (1) + (5) -155.927 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.41 seconds