Wall clock time and date at job start Sun Mar 7 2021 01:39:04
AMSOL-version 7.1
by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers,
I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget,
B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar
Copyright 2004 by Regents of the University of Minnesota.
All rights reserved.
Notice: recipients of this code are asked to comply
with the user agreement in Section 1 of the documentation file.
*******************************************************************************
* 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION
* - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT)
* GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK
* TLIMIT= - A TIME OF 15. SECONDS REQUESTED
* CHARGE - CHARGE ON SYSTEM= 0
* AM1 - THE AM1 HAMILTONIAN TO BE USED
* SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED
* - CHARGE MODEL 2 WILL BE USED (CM2A)
* - THE SOLVENT IS WATER
*******************************************************************************
Atom NO. Chemical Bond length Bond angle Dihedral angle
number (k) symbol (angstroms) (degrees) (degrees)
(I) NA:I NB:NA:I NC:NB:NA:I NA NB NC
1 1 C
2 2 O 1.45199 * 1
3 3 C 1.34237 * 116.99726 * 2 1
4 4 O 1.20824 * 119.99787 * 0.02562 * 3 2 1
5 5 C 1.50696 * 119.99850 * 180.02562 * 3 2 1
6 6 H 1.09006 * 109.46924 * 299.99900 * 5 3 2
7 7 C 1.52999 * 109.47227 * 59.99783 * 5 3 2
8 8 C 1.53004 * 109.47321 * 180.02562 * 7 5 3
9 9 C 1.52999 * 109.46862 * 300.00171 * 8 7 5
10 10 H 1.09006 * 109.47221 * 299.99706 * 9 8 7
11 11 N 1.46502 * 109.47092 * 180.02562 * 9 8 7
12 12 C 1.34772 * 119.99757 * 84.99669 * 11 9 8
13 13 O 1.21272 * 120.00538 * 0.02562 * 12 11 9
14 14 C 1.50710 * 119.99649 * 180.02562 * 12 11 9
15 15 O 1.42895 * 109.47111 * 180.02562 * 14 12 11
16 16 C 1.35900 * 117.00037 * 179.97438 * 15 14 12
17 17 C 1.38754 * 120.02719 * 180.02562 * 16 15 14
18 18 C 1.50706 * 119.97102 * 359.95511 * 17 16 15
19 19 O 1.42901 * 109.47017 * 75.00418 * 18 17 16
20 20 Si 1.86301 * 109.46932 * 195.00041 * 18 17 16
21 21 C 1.38194 * 120.05625 * 180.23169 * 17 16 15
22 22 C 1.38163 * 120.10588 * 359.48969 * 21 17 16
23 23 C 1.38798 * 120.05117 * 0.51244 * 22 21 17
24 24 O 1.35900 * 120.02548 * 179.76613 * 23 22 21
25 25 C 1.42903 * 116.99948 * 359.97438 * 24 23 22
26 26 C 1.38617 * 119.94726 * 359.74009 * 23 22 21
27 27 C 1.52999 * 109.47292 * 59.99811 * 9 8 7
28 28 C 1.52999 * 109.46994 * 179.97438 * 5 3 2
29 29 H 1.09003 * 109.47212 * 60.00008 * 1 2 3
30 30 H 1.08998 * 109.47163 * 180.02562 * 1 2 3
31 31 H 1.09004 * 109.47502 * 299.99786 * 1 2 3
32 32 H 1.09005 * 109.47340 * 299.99736 * 7 5 3
33 33 H 1.09000 * 109.47393 * 59.99883 * 7 5 3
34 34 H 1.08999 * 109.46941 * 180.02562 * 8 7 5
35 35 H 1.09006 * 109.46962 * 60.00036 * 8 7 5
36 36 H 0.97004 * 119.99490 * 264.99879 * 11 9 8
37 37 H 1.08999 * 109.47109 * 59.99971 * 14 12 11
38 38 H 1.09004 * 109.46927 * 300.00055 * 14 12 11
39 39 H 1.08996 * 109.47392 * 314.99895 * 18 17 16
40 40 H 0.96701 * 114.00441 * 59.99706 * 19 18 17
41 41 H 1.48496 * 109.99919 * 180.02562 * 20 18 17
42 42 H 1.48507 * 110.00031 * 301.32137 * 20 18 17
43 43 H 1.07988 * 119.94926 * 179.74248 * 21 17 16
44 44 H 1.07998 * 119.97264 * 180.23092 * 22 21 17
45 45 H 1.09000 * 109.47382 * 180.02562 * 25 24 23
46 46 H 1.09005 * 109.46849 * 300.00210 * 25 24 23
47 47 H 1.08998 * 109.47630 * 59.99436 * 25 24 23
48 48 H 1.07995 * 120.05243 * 179.97438 * 26 23 22
49 49 H 1.09006 * 109.47073 * 59.99804 * 27 9 8
50 50 H 1.08995 * 109.47296 * 180.02562 * 27 9 8
51 51 H 1.08999 * 109.47344 * 60.00278 * 28 5 3
52 52 H 1.09000 * 109.46796 * 299.99609 * 28 5 3
Note: An asterisk (*) indicates this parameter was or will be optimized.
Cartesian coordinates (angstroms)
NO. Atom X Y Z
1 6 0.0000 0.0000 0.0000
2 8 1.4520 0.0000 0.0000
3 6 2.0614 1.1961 0.0000
4 8 1.4032 2.2094 0.0005
5 6 3.5663 1.2750 -0.0006
6 1 3.9563 0.7807 0.8892
7 6 4.1128 0.5817 -1.2501
8 6 5.6408 0.6612 -1.2504
9 6 6.0751 2.1283 -1.2500
10 1 5.6853 2.6228 -2.1398
11 7 7.5381 2.2045 -1.2509
12 6 8.2156 2.1384 -2.4141
13 8 7.6141 2.0164 -3.4601
14 6 9.7207 2.2163 -2.4149
15 8 10.2016 2.1251 -3.7575
16 6 11.5477 2.1799 -3.9357
17 6 12.0829 2.0977 -5.2132
18 6 11.1707 1.9466 -6.4033
19 8 10.5371 3.1973 -6.6796
20 14 12.1664 1.4141 -7.8852
21 6 13.4519 2.1485 -5.3947
22 6 14.2905 2.2919 -4.3061
23 6 13.7600 2.3745 -3.0261
24 8 14.5855 2.5107 -1.9553
25 6 15.9889 2.5614 -2.2203
26 6 12.3873 2.3185 -2.8411
27 6 5.5285 2.8216 -0.0004
28 6 4.0000 2.7422 -0.0011
29 1 -0.3634 0.5138 -0.8900
30 1 -0.3633 -1.0276 0.0005
31 1 -0.3634 0.5138 0.8900
32 1 3.8039 -0.4637 -1.2502
33 1 3.7228 1.0759 -2.1399
34 1 6.0301 0.1676 -2.1409
35 1 6.0306 0.1666 -0.3606
36 1 8.0191 2.3024 -0.4142
37 1 10.1273 1.3940 -1.8263
38 1 10.0356 3.1649 -1.9802
39 1 10.4119 1.1949 -6.1863
40 1 11.1536 3.9144 -6.8818
41 1 11.2785 1.2621 -9.0657
42 1 13.2252 2.4152 -8.1721
43 1 13.8668 2.0802 -6.3894
44 1 15.3599 2.3351 -4.4507
45 1 16.5322 2.6709 -1.2817
46 1 16.2989 1.6403 -2.7139
47 1 16.2060 3.4111 -2.8675
48 1 11.9727 2.3822 -1.8459
49 1 5.9182 2.3270 0.8893
50 1 5.8375 3.8668 -0.0004
51 1 3.6106 3.2365 0.8889
52 1 3.6099 3.2360 -0.8911
There are 71 doubly filled levels
RHF calculation, no. of doubly occupied orbitals= 71
No. of singly occupied orbitals= 1
REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN:
H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985)
Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987).
REFERENCE FOR CHARGE MODEL 2:
J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885.
REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL:
J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and
D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63
P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted.
CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R
& SOLVNT=WATER
s_22_14475160_4974312.mol2 52
1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED
SCF FIELD WAS ACHIEVED
Wall clock time and date at job start Sun Mar 7 2021 01:39:04
Heat of formation + Delta-G solvation = -199.418829 kcal
Electronic energy + Delta-G solvation = -34935.263143 eV
Core-core repulsion = 30060.393116 eV
Total energy + Delta-G solvation = -4874.870027 eV
No. of doubly occupied orbitals = 71
and no. of open levels = 1
Molecular weight
(most abundant/longest-lived isotopes) = 380.181 amu
Computer time = 1.45 seconds
Orbital eigenvalues (eV)
-41.92910 -41.76496 -40.99919 -39.97539 -39.04731 -38.30121 -37.55434 -37.00099
-35.41813 -32.33256 -31.99657 -31.84153 -31.11139 -29.31421 -28.43205 -28.23683
-26.12793 -24.88377 -23.85107 -23.57119 -22.48960 -22.01994 -21.61012 -20.84162
-19.95435 -18.74055 -18.58502 -18.16455 -17.86156 -17.81787 -17.53759 -17.46716
-17.25363 -16.90557 -16.65778 -16.48761 -16.05260 -15.85912 -15.61090 -15.22858
-15.16389 -15.10973 -14.94172 -14.70581 -14.50287 -14.27468 -13.98620 -13.76137
-13.73806 -13.44165 -13.33163 -13.30967 -13.14089 -13.02113 -12.70131 -12.48735
-12.39535 -12.29963 -12.20987 -12.02480 -11.87141 -11.65055 -11.62873 -11.59871
-11.49770 -11.37297 -10.95621 -10.51366 -10.16463 -9.69419 -9.09838 -4.93185
0.20634 0.31390 1.07555 1.31796 1.44335 1.44916 1.55643 1.70877
1.96413 2.25696 2.56527 2.59157 3.44918 3.49269 3.50084 3.59114
3.69664 3.73360 3.81020 3.90604 3.96581 4.02466 4.07086 4.09606
4.17077 4.18012 4.25712 4.26565 4.28583 4.31349 4.35588 4.41304
4.41669 4.43389 4.47529 4.60045 4.66537 4.66865 4.76875 4.80062
4.91290 5.02770 5.02880 5.07152 5.09081 5.23239 5.24220 5.25883
5.28390 5.33717 5.43963 5.48538 6.14512 6.36878 6.47475 6.57301
6.63313 7.14505
Net atomic charges, atomic populations, and dipole contributions
calculated with CM2
Atom NO. Type Charge No. of electrons
1 C 0.027 3.973
2 O -0.362 6.362
3 C 0.461 3.539
4 O -0.541 6.541
5 C -0.074 4.074
6 H 0.141 0.859
7 C -0.104 4.104
8 C -0.120 4.120
9 C 0.143 3.857
10 H 0.060 0.940
11 N -0.704 5.704
12 C 0.514 3.486
13 O -0.568 6.568
14 C 0.034 3.966
15 O -0.303 6.303
16 C 0.177 3.823
17 C -0.196 4.196
18 C -0.077 4.077
19 O -0.550 6.550
20 Si 0.781 3.219
21 C -0.041 4.041
22 C -0.238 4.238
23 C 0.165 3.835
24 O -0.330 6.330
25 C 0.016 3.984
26 C -0.251 4.251
27 C -0.112 4.112
28 C -0.100 4.100
29 H 0.057 0.943
30 H 0.129 0.871
31 H 0.062 0.938
32 H 0.088 0.912
33 H 0.053 0.947
34 H 0.054 0.946
35 H 0.096 0.904
36 H 0.422 0.578
37 H 0.126 0.874
38 H 0.119 0.881
39 H 0.097 0.903
40 H 0.381 0.619
41 H -0.309 1.309
42 H -0.263 1.263
43 H 0.155 0.845
44 H 0.157 0.843
45 H 0.117 0.883
46 H 0.070 0.930
47 H 0.066 0.934
48 H 0.155 0.845
49 H 0.104 0.896
50 H 0.083 0.917
51 H 0.081 0.919
52 H 0.055 0.945
For the charges calculated by CM2:
Dipole moment (debyes) X Y Z Total
from point charges 8.070 -3.463 7.173 11.339
Note: The Mulliken population analysis charges presented below were not
used in the solvation calculation but are provided for completeness.
The chosen solvation model uses CM2 partial charges for calculating
solvation energies.
Net atomic charges, atomic populations, and dipole contributions
using Mulliken population analysis
Atom NO. Type Charge No. of electrons
1 C -0.066 4.066
2 O -0.278 6.278
3 C 0.306 3.694
4 O -0.431 6.431
5 C -0.093 4.093
6 H 0.159 0.841
7 C -0.142 4.142
8 C -0.159 4.159
9 C 0.038 3.962
10 H 0.078 0.922
11 N -0.358 5.358
12 C 0.300 3.700
13 O -0.446 6.446
14 C -0.044 4.044
15 O -0.215 6.215
16 C 0.131 3.869
17 C -0.197 4.197
18 C -0.185 4.185
19 O -0.357 6.357
20 Si 0.685 3.315
21 C -0.059 4.059
22 C -0.257 4.257
23 C 0.118 3.882
24 O -0.243 6.243
25 C -0.078 4.078
26 C -0.270 4.270
27 C -0.150 4.150
28 C -0.138 4.138
29 H 0.076 0.924
30 H 0.147 0.853
31 H 0.081 0.919
32 H 0.107 0.893
33 H 0.072 0.928
34 H 0.072 0.928
35 H 0.115 0.885
36 H 0.260 0.740
37 H 0.144 0.856
38 H 0.136 0.864
39 H 0.116 0.884
40 H 0.230 0.770
41 H -0.237 1.237
42 H -0.189 1.189
43 H 0.172 0.828
44 H 0.174 0.826
45 H 0.135 0.865
46 H 0.089 0.911
47 H 0.085 0.915
48 H 0.172 0.828
49 H 0.122 0.878
50 H 0.102 0.898
51 H 0.099 0.901
52 H 0.074 0.926
Dipole moment (debyes) X Y Z Total
from point charges 6.936 -3.420 5.825 9.682
hybrid contribution -0.578 1.501 0.254 1.628
sum 6.358 -1.919 6.080 9.004
Atomic orbital electron populations
1.23516 0.75171 1.05607 1.02334 1.86509 1.24652 1.33138 1.83550
1.24410 0.93112 0.80980 0.70935 1.90673 1.68184 1.37492 1.46741
1.21261 0.84983 0.99804 1.03230 0.84129 1.21436 0.95644 1.01694
0.95421 1.21852 0.94521 0.96056 1.03447 1.21040 0.78921 0.96535
0.99678 0.92197 1.45703 1.07248 1.74142 1.08740 1.20467 0.89572
0.75937 0.84066 1.90782 1.71012 1.49463 1.33332 1.22761 0.91345
1.06485 0.83783 1.86224 1.19164 1.87545 1.28614 1.18580 0.81609
0.93416 0.93301 1.19600 0.94613 1.12528 0.92976 1.25153 1.01281
0.88809 1.03255 1.86653 1.37671 1.20239 1.91177 0.94138 0.77056
0.87558 0.72779 1.20937 0.90739 0.94127 1.00084 1.21399 1.01950
1.11229 0.91107 1.18874 0.89954 0.92559 0.86768 1.86055 1.19603
1.87217 1.31398 1.23404 0.76717 1.02679 1.05013 1.20555 0.91488
1.15425 0.99553 1.21753 0.93901 1.02106 0.97249 1.21382 0.95747
0.93250 1.03460 0.92415 0.85263 0.91923 0.89328 0.92827 0.92760
0.88526 0.73989 0.85641 0.86370 0.88448 0.77038 1.23741 1.18875
0.82770 0.82563 0.86517 0.91106 0.91527 0.82788 0.87762 0.89802
0.90058 0.92649
Number of geometries 1
Number of calculations of the screened coulomb radii 1
The total number of SCF iterations 14.
Note: The number of geometries may not
correspond to the number of cycles due to rejected geometry changes.
In the following table subtotal= G_P + SS G_CDS.
Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M
number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value
1 C 0.03 0.00 10.56 113.37 1.20 1.19 16
2 O -0.36 -1.20 10.47 -51.49 -0.54 -1.74 16
3 C 0.46 2.16 7.26 71.23 0.52 2.67 16
4 O -0.54 -6.19 15.73 21.97 0.35 -5.84 16
5 C -0.07 0.17 2.63 -11.54 -0.03 0.13 16
6 H 0.14 -1.09 8.14 -2.38 -0.02 -1.11 16
7 C -0.10 0.15 5.13 30.60 0.16 0.30 16
8 C -0.12 0.29 5.49 30.60 0.17 0.46 16
9 C 0.14 -0.27 2.45 44.99 0.11 -0.16 16
10 H 0.06 0.32 7.58 -2.38 -0.02 0.31 16
11 N -0.70 2.89 5.08 -442.53 -2.25 0.64 16
12 C 0.51 2.05 7.87 87.66 0.69 2.74 16
13 O -0.57 -9.14 16.16 16.03 0.26 -8.88 16
14 C 0.03 -0.03 5.22 71.24 0.37 0.34 16
15 O -0.30 -2.45 8.99 -73.39 -0.66 -3.11 16
16 C 0.18 0.93 6.66 22.49 0.15 1.08 16
17 C -0.20 -0.84 5.28 -19.75 -0.10 -0.94 16
18 C -0.08 -0.48 2.37 71.24 0.17 -0.31 16
19 O -0.55 -5.66 12.88 -148.98 -1.92 -7.58 16
20 Si 0.78 0.67 30.23 68.60 2.07 2.75 16
21 C -0.04 0.01 8.65 22.24 0.19 0.20 16
22 C -0.24 0.29 9.04 22.39 0.20 0.49 16
23 C 0.16 0.20 6.68 22.49 0.15 0.35 16
24 O -0.33 -0.08 10.50 -92.43 -0.97 -1.05 16
25 C 0.02 -0.11 9.81 113.37 1.11 1.00 16
26 C -0.25 -0.41 8.97 22.46 0.20 -0.21 16
27 C -0.11 0.76 5.40 30.61 0.17 0.93 16
28 C -0.10 0.21 4.50 30.61 0.14 0.34 16
29 H 0.06 0.07 8.13 -2.39 -0.02 0.05 16
30 H 0.13 -0.76 8.14 -2.39 -0.02 -0.78 16
31 H 0.06 0.01 8.13 -2.38 -0.02 -0.01 16
32 H 0.09 -0.20 8.11 -2.38 -0.02 -0.22 16
33 H 0.05 0.14 8.14 -2.39 -0.02 0.12 16
34 H 0.05 0.16 8.14 -2.39 -0.02 0.14 16
35 H 0.10 -0.70 8.14 -2.38 -0.02 -0.72 16
36 H 0.42 -5.15 8.60 -92.71 -0.80 -5.94 16
37 H 0.13 -0.93 7.66 -2.39 -0.02 -0.95 16
38 H 0.12 -0.72 7.66 -2.38 -0.02 -0.74 16
39 H 0.10 0.91 7.82 -2.39 -0.02 0.89 16
40 H 0.38 1.06 8.70 -74.06 -0.64 0.42 16
41 H -0.31 -2.90 7.11 99.48 0.71 -2.19 16
42 H -0.26 -0.29 6.69 99.48 0.67 0.37 16
43 H 0.16 -0.67 4.85 -2.92 -0.01 -0.68 16
44 H 0.16 -0.99 6.29 -2.91 -0.02 -1.01 16
45 H 0.12 -1.14 8.14 -2.39 -0.02 -1.16 16
46 H 0.07 -0.63 7.66 -2.38 -0.02 -0.65 16
47 H 0.07 -0.55 7.66 -2.39 -0.02 -0.57 16
48 H 0.15 -0.46 6.30 -2.91 -0.02 -0.48 16
49 H 0.10 -1.25 8.14 -2.38 -0.02 -1.27 16
50 H 0.08 -0.59 8.14 -2.39 -0.02 -0.61 16
51 H 0.08 -0.14 8.10 -2.39 -0.02 -0.16 16
52 H 0.05 0.15 8.10 -2.39 -0.02 0.13 16
Total: 0.00 -32.44 424.30 1.42 -31.02
By element:
Atomic # 1 Polarization: -16.36 SS G_CDS: -0.48 Total: -16.85 kcal
Atomic # 6 Polarization: 5.08 SS G_CDS: 5.56 Total: 10.63 kcal
Atomic # 7 Polarization: 2.89 SS G_CDS: -2.25 Total: 0.64 kcal
Atomic # 8 Polarization: -24.71 SS G_CDS: -3.48 Total: -28.20 kcal
Atomic # 14 Polarization: 0.67 SS G_CDS: 2.07 Total: 2.75 kcal
Total: -32.44 1.42 -31.02 kcal
The number of atoms in the molecule is 52
The average number of expansion shells was 16.00
The maximum number of expansion shells was 16
The minimum number of expansion shells was 16
**** NOTA BENE ****
This is the net solvation energy for this exact molecular structure
(nuclear and electronic)! The standard-state solvation energy should be
obtained as the difference between the heat of formation plus delta-G solvation
for the relaxed solvated system and that for the relaxed gas-phase system.
s_22_14475160_4974312.mol2 52
1SCF run
This is a breakdown of the solvation energy calculated
without geometric relaxation in solution:
(1) E-EN(sol) electronic-nuclear energy of solute -168.399 kcal
(2) G-P(sol) polarization free energy of solvation -32.438 kcal
(3) G-ENP(sol) elect.-nuc.-pol. free energy of system -200.837 kcal
(4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.418 kcal
(5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.020 kcal
(6) G-S(sol) free energy of system = (1) + (5) -199.419 kcal
1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED
Total computer time = 1.45 seconds