Wall clock time and date at job start Sun Mar 7 2021 01:39:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45199 * 1 3 3 C 1.34227 * 116.99962 * 2 1 4 4 O 1.20821 * 120.00171 * 0.02562 * 3 2 1 5 5 C 1.50703 * 119.99935 * 179.97438 * 3 2 1 6 6 H 1.09003 * 109.47476 * 300.00455 * 5 3 2 7 7 C 1.52997 * 109.46779 * 60.00010 * 5 3 2 8 8 C 1.53005 * 109.47088 * 179.97438 * 7 5 3 9 9 C 1.52996 * 109.47104 * 300.00264 * 8 7 5 10 10 H 1.08998 * 109.47296 * 299.99727 * 9 8 7 11 11 N 1.46499 * 109.47313 * 179.97438 * 9 8 7 12 12 C 1.34781 * 120.00024 * 84.99514 * 11 9 8 13 13 O 1.21281 * 119.99907 * 0.02562 * 12 11 9 14 14 C 1.50693 * 119.99863 * 180.02562 * 12 11 9 15 15 O 1.42904 * 109.46927 * 180.02562 * 14 12 11 16 16 C 1.36001 * 116.99940 * 180.02562 * 15 14 12 17 17 C 1.39150 * 120.06992 * 179.97438 * 16 15 14 18 18 O 1.35996 * 120.07889 * 0.02562 * 17 16 15 19 19 C 1.42899 * 117.00293 * 179.97438 * 18 17 16 20 20 C 1.38570 * 119.85059 * 179.78936 * 17 16 15 21 21 C 1.38237 * 120.00157 * 0.49204 * 20 17 16 22 22 C 1.50699 * 119.93009 * 179.76371 * 21 20 17 23 23 O 1.42892 * 109.47249 * 299.72411 * 22 21 20 24 24 Si 1.86298 * 109.47032 * 179.71797 * 22 21 20 25 25 C 1.38261 * 120.14345 * 359.48513 * 21 20 17 26 26 C 1.38242 * 120.14306 * 0.27869 * 25 21 20 27 27 C 1.52997 * 109.47363 * 59.99905 * 9 8 7 28 28 C 1.52996 * 109.47188 * 180.02562 * 5 3 2 29 29 H 1.08998 * 109.47265 * 179.97438 * 1 2 3 30 30 H 1.08997 * 109.47418 * 300.00054 * 1 2 3 31 31 H 1.08997 * 109.46882 * 59.99743 * 1 2 3 32 32 H 1.09000 * 109.47577 * 300.00259 * 7 5 3 33 33 H 1.08998 * 109.47059 * 60.00341 * 7 5 3 34 34 H 1.09001 * 109.47042 * 180.02562 * 8 7 5 35 35 H 1.08998 * 109.46821 * 60.00282 * 8 7 5 36 36 H 0.96997 * 119.99966 * 265.00288 * 11 9 8 37 37 H 1.08998 * 109.47605 * 60.01099 * 14 12 11 38 38 H 1.09000 * 109.47769 * 300.00543 * 14 12 11 39 39 H 1.08996 * 109.47152 * 299.99846 * 19 18 17 40 40 H 1.08997 * 109.46545 * 60.00270 * 19 18 17 41 41 H 1.09003 * 109.46876 * 179.97438 * 19 18 17 42 42 H 1.08001 * 120.00138 * 180.22764 * 20 17 16 43 43 H 1.09004 * 109.46453 * 59.72479 * 22 21 20 44 44 H 0.96703 * 114.00176 * 299.99748 * 23 22 21 45 45 H 1.48506 * 109.99834 * 58.68765 * 24 22 21 46 46 H 1.48502 * 110.00011 * 180.02562 * 24 22 21 47 47 H 1.07997 * 119.92489 * 180.25473 * 25 21 20 48 48 H 1.08006 * 119.99281 * 179.97438 * 26 25 21 49 49 H 1.08998 * 109.47059 * 59.99677 * 27 9 8 50 50 H 1.09000 * 109.47577 * 179.97438 * 27 9 8 51 51 H 1.09001 * 109.47224 * 60.00374 * 28 5 3 52 52 H 1.08998 * 109.47296 * 300.00055 * 28 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4034 2.2093 0.0005 5 6 3.5663 1.2748 0.0006 6 1 3.9558 0.7808 0.8908 7 6 4.1138 0.5810 -1.2483 8 6 5.6417 0.6616 -1.2481 9 6 6.0750 2.1289 -1.2485 10 1 5.6853 2.6226 -2.1387 11 7 7.5380 2.2061 -1.2477 12 6 8.2170 2.1394 -2.4101 13 8 7.6168 2.0160 -3.4567 14 6 9.7218 2.2183 -2.4091 15 8 10.2044 2.1261 -3.7510 16 6 11.5518 2.1807 -3.9277 17 6 12.0912 2.0963 -5.2077 18 8 11.2722 1.9597 -6.2848 19 6 11.8958 1.8800 -7.5680 20 6 13.4644 2.1568 -5.3828 21 6 14.2959 2.2903 -4.2866 22 6 15.7894 2.3505 -4.4785 23 8 16.2384 1.1460 -5.1026 24 14 16.6212 2.5393 -2.8222 25 6 13.7599 2.3745 -3.0148 26 6 12.3905 2.3198 -2.8336 27 6 5.5276 2.8227 0.0004 28 6 4.0001 2.7420 0.0011 29 1 -0.3634 -1.0276 -0.0005 30 1 -0.3634 0.5138 0.8899 31 1 -0.3633 0.5139 -0.8899 32 1 3.8047 -0.4642 -1.2483 33 1 3.7244 1.0750 -2.1385 34 1 6.0317 0.1677 -2.1381 35 1 6.0314 0.1679 -0.3579 36 1 8.0179 2.3051 -0.4106 37 1 10.1284 1.3968 -1.8194 38 1 10.0358 3.1675 -1.9748 39 1 12.4699 2.7885 -7.7501 40 1 12.5618 1.0176 -7.5953 41 1 11.1312 1.7727 -8.3375 42 1 13.8854 2.0952 -6.3755 43 1 16.0403 3.2026 -5.1103 44 1 16.0480 0.3454 -4.5948 45 1 16.2613 1.3999 -1.9403 46 1 18.0945 2.6005 -2.9978 47 1 14.4125 2.4829 -2.1612 48 1 11.9744 2.3854 -1.8391 49 1 5.9173 2.3290 0.8906 50 1 5.8366 3.8680 0.0004 51 1 3.6102 3.2359 0.8911 52 1 3.6108 3.2364 -0.8889 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14475160_60476.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:39:14 Heat of formation + Delta-G solvation = -196.833947 kcal Electronic energy + Delta-G solvation = -34569.586779 eV Core-core repulsion = 29694.828841 eV Total energy + Delta-G solvation = -4874.757938 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 380.181 amu Computer time = 1.23 seconds Orbital eigenvalues (eV) -41.86935 -41.70268 -40.93011 -39.58477 -38.96572 -38.69348 -37.40333 -37.00097 -35.36012 -32.24998 -32.01354 -31.63082 -31.31458 -29.41169 -28.51995 -28.28511 -26.23260 -24.80913 -23.94825 -23.49587 -22.55644 -21.97181 -21.60286 -20.87342 -19.77634 -18.69009 -18.55864 -18.34189 -18.00727 -17.74102 -17.53936 -17.35055 -17.20164 -16.98779 -16.61358 -16.16128 -15.92544 -15.83429 -15.77700 -15.50342 -15.22782 -15.09116 -14.93336 -14.69349 -14.31544 -14.21817 -13.99273 -13.79223 -13.73040 -13.54686 -13.45957 -13.37367 -13.06200 -12.72767 -12.60185 -12.55176 -12.48180 -12.32623 -12.18285 -12.15515 -12.00476 -11.78448 -11.68089 -11.66845 -11.49565 -11.29709 -10.82654 -10.64649 -10.17175 -9.78618 -8.85956 -4.99411 0.16973 0.29305 1.20750 1.25037 1.42799 1.51456 1.56484 1.71682 1.93291 2.31695 2.52113 2.56228 3.32171 3.39360 3.40855 3.50133 3.61065 3.64341 3.76773 3.78566 3.82664 3.88696 3.93778 3.97842 4.10704 4.11989 4.16510 4.18798 4.22274 4.25385 4.25834 4.29090 4.30069 4.34067 4.51038 4.52156 4.56968 4.58889 4.65184 4.65581 4.83727 4.88752 4.98428 4.99568 5.01172 5.09576 5.12983 5.17921 5.35516 5.36126 5.42732 5.55034 5.96274 6.33056 6.36963 6.54600 6.75161 7.11789 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.358 6.358 3 C 0.463 3.537 4 O -0.505 6.505 5 C -0.081 4.081 6 H 0.112 0.888 7 C -0.109 4.109 8 C -0.128 4.128 9 C 0.144 3.856 10 H 0.093 0.907 11 N -0.725 5.725 12 C 0.516 3.484 13 O -0.507 6.507 14 C 0.038 3.962 15 O -0.277 6.277 16 C 0.105 3.895 17 C 0.107 3.893 18 O -0.302 6.302 19 C 0.025 3.975 20 C -0.147 4.147 21 C -0.114 4.114 22 C -0.073 4.073 23 O -0.530 6.530 24 Si 0.686 3.314 25 C -0.113 4.113 26 C -0.170 4.170 27 C -0.125 4.125 28 C -0.101 4.101 29 H 0.103 0.897 30 H 0.064 0.936 31 H 0.064 0.936 32 H 0.083 0.917 33 H 0.073 0.927 34 H 0.077 0.923 35 H 0.071 0.929 36 H 0.402 0.598 37 H 0.094 0.906 38 H 0.095 0.905 39 H 0.056 0.944 40 H 0.056 0.944 41 H 0.103 0.897 42 H 0.141 0.859 43 H 0.118 0.882 44 H 0.376 0.624 45 H -0.260 1.260 46 H -0.257 1.257 47 H 0.133 0.867 48 H 0.139 0.861 49 H 0.074 0.926 50 H 0.079 0.921 51 H 0.080 0.920 52 H 0.078 0.922 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.905 0.043 5.688 5.999 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.275 6.275 3 C 0.306 3.694 4 O -0.392 6.392 5 C -0.100 4.100 6 H 0.130 0.870 7 C -0.147 4.147 8 C -0.167 4.167 9 C 0.040 3.960 10 H 0.111 0.889 11 N -0.379 5.379 12 C 0.301 3.699 13 O -0.380 6.380 14 C -0.041 4.041 15 O -0.189 6.189 16 C 0.059 3.941 17 C 0.061 3.939 18 O -0.215 6.215 19 C -0.070 4.070 20 C -0.165 4.165 21 C -0.114 4.114 22 C -0.182 4.182 23 O -0.337 6.337 24 Si 0.587 3.413 25 C -0.131 4.131 26 C -0.188 4.188 27 C -0.163 4.163 28 C -0.139 4.139 29 H 0.121 0.879 30 H 0.082 0.918 31 H 0.083 0.917 32 H 0.102 0.898 33 H 0.091 0.909 34 H 0.095 0.905 35 H 0.089 0.911 36 H 0.236 0.764 37 H 0.112 0.888 38 H 0.113 0.887 39 H 0.075 0.925 40 H 0.075 0.925 41 H 0.121 0.879 42 H 0.158 0.842 43 H 0.136 0.864 44 H 0.224 0.776 45 H -0.184 1.184 46 H -0.182 1.182 47 H 0.150 0.850 48 H 0.157 0.843 49 H 0.092 0.908 50 H 0.098 0.902 51 H 0.099 0.901 52 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges 1.624 0.291 4.844 5.117 hybrid contribution 0.094 -1.060 0.161 1.076 sum 1.718 -0.769 5.005 5.347 Atomic orbital electron populations 1.23314 0.75959 1.03981 1.02713 1.86504 1.23712 1.33375 1.83893 1.23791 0.92021 0.81413 0.72178 1.90691 1.67202 1.36374 1.44899 1.21172 0.87003 0.99507 1.02287 0.87034 1.21499 0.95418 1.01658 0.96106 1.21932 0.94973 0.96375 1.03418 1.21083 0.78626 0.96354 0.99963 0.88855 1.45874 1.07483 1.75855 1.08682 1.20024 0.88677 0.76995 0.84236 1.90802 1.69856 1.46313 1.31064 1.22490 0.92920 1.03858 0.84820 1.86283 1.18115 1.88267 1.26237 1.18283 0.82698 1.01644 0.91500 1.18283 0.89038 1.00843 0.85732 1.86250 1.33807 1.87766 1.13640 1.23131 0.99942 1.01307 0.82638 1.20938 0.90483 1.04716 1.00397 1.19985 0.95983 1.02598 0.92877 1.25010 0.92696 0.90281 1.10252 1.86593 1.82080 1.15921 1.49065 0.95001 0.80183 0.89949 0.76163 1.20686 0.94491 1.01596 0.96303 1.20986 0.93735 1.06583 0.97530 1.21804 0.95453 1.01680 0.97326 1.21387 0.94536 0.93469 1.04548 0.87866 0.91769 0.91745 0.89849 0.90851 0.90461 0.91076 0.76379 0.88845 0.88726 0.92505 0.92539 0.87869 0.84176 0.86376 0.77605 1.18447 1.18231 0.85006 0.84289 0.90775 0.90233 0.90096 0.90370 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 101.05 1.07 1.05 16 2 O -0.36 -0.46 10.47 -39.25 -0.41 -0.87 16 3 C 0.46 0.78 7.25 36.01 0.26 1.04 16 4 O -0.50 -2.34 15.73 -18.75 -0.29 -2.64 16 5 C -0.08 0.11 2.63 -91.77 -0.24 -0.13 16 6 H 0.11 -0.34 8.14 -51.93 -0.42 -0.76 16 7 C -0.11 0.15 5.14 -26.73 -0.14 0.01 16 8 C -0.13 0.20 5.49 -26.73 -0.15 0.06 16 9 C 0.14 -0.23 2.45 -67.93 -0.17 -0.40 16 10 H 0.09 0.08 7.58 -51.93 -0.39 -0.32 16 11 N -0.73 1.77 5.08 -53.81 -0.27 1.49 16 12 C 0.52 0.55 7.87 -10.99 -0.09 0.46 16 13 O -0.51 -3.21 16.16 -14.35 -0.23 -3.45 16 14 C 0.04 -0.04 5.22 36.00 0.19 0.15 16 15 O -0.28 -1.00 9.46 -47.37 -0.45 -1.44 16 16 C 0.10 0.25 6.70 -39.13 -0.26 -0.01 16 17 C 0.11 0.34 6.70 -39.12 -0.26 0.08 16 18 O -0.30 -1.29 10.28 -34.23 -0.35 -1.64 16 19 C 0.02 0.01 9.81 101.05 0.99 1.00 16 20 C -0.15 -0.20 8.60 -39.46 -0.34 -0.54 16 21 C -0.11 -0.02 5.39 -104.61 -0.56 -0.58 16 22 C -0.07 0.04 2.82 36.01 0.10 0.14 16 23 O -0.53 -0.49 12.77 -35.23 -0.45 -0.94 16 24 Si 0.69 -1.02 29.78 -169.99 -5.06 -6.08 16 25 C -0.11 0.10 8.66 -39.57 -0.34 -0.25 16 26 C -0.17 0.10 9.04 -39.46 -0.36 -0.26 16 27 C -0.12 0.42 5.39 -26.76 -0.14 0.28 16 28 C -0.10 0.16 4.49 -26.76 -0.12 0.04 16 29 H 0.10 -0.29 8.14 -51.93 -0.42 -0.72 16 30 H 0.06 -0.03 8.13 -51.93 -0.42 -0.45 16 31 H 0.06 -0.02 8.13 -51.93 -0.42 -0.44 16 32 H 0.08 -0.12 8.11 -51.93 -0.42 -0.54 16 33 H 0.07 -0.02 8.14 -51.93 -0.42 -0.45 16 34 H 0.08 0.04 8.14 -51.93 -0.42 -0.38 16 35 H 0.07 -0.20 8.14 -51.93 -0.42 -0.63 16 36 H 0.40 -2.34 8.60 -40.82 -0.35 -2.69 16 37 H 0.09 -0.36 7.66 -51.93 -0.40 -0.76 16 38 H 0.09 -0.37 7.66 -51.93 -0.40 -0.77 16 39 H 0.06 -0.05 7.65 -51.93 -0.40 -0.45 16 40 H 0.06 -0.04 7.67 -51.93 -0.40 -0.44 16 41 H 0.10 -0.10 8.14 -51.93 -0.42 -0.53 16 42 H 0.14 0.06 6.30 -52.49 -0.33 -0.27 16 43 H 0.12 -0.14 7.96 -51.93 -0.41 -0.56 16 44 H 0.38 -0.67 8.70 45.56 0.40 -0.28 16 45 H -0.26 -0.08 7.11 56.52 0.40 0.32 16 46 H -0.26 -0.50 7.11 56.52 0.40 -0.10 16 47 H 0.13 -0.40 4.87 -52.49 -0.26 -0.65 16 48 H 0.14 -0.53 6.30 -52.48 -0.33 -0.86 16 49 H 0.07 -0.36 8.14 -51.93 -0.42 -0.78 16 50 H 0.08 -0.28 8.14 -51.93 -0.42 -0.71 16 51 H 0.08 -0.10 8.10 -51.93 -0.42 -0.52 16 52 H 0.08 -0.02 8.10 -51.93 -0.42 -0.44 16 LS Contribution 424.83 15.07 6.40 6.40 Total: 0.00 -12.53 424.83 -9.64 -22.17 By element: Atomic # 1 Polarization: -7.19 SS G_CDS: -7.96 Total: -15.15 kcal Atomic # 6 Polarization: 2.69 SS G_CDS: -0.56 Total: 2.13 kcal Atomic # 7 Polarization: 1.77 SS G_CDS: -0.27 Total: 1.49 kcal Atomic # 8 Polarization: -8.79 SS G_CDS: -2.19 Total: -10.98 kcal Atomic # 14 Polarization: -1.02 SS G_CDS: -5.06 Total: -6.08 kcal Total LS contribution 6.40 Total: 6.40 kcal Total: -12.53 -9.64 -22.17 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14475160_60476.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -174.661 kcal (2) G-P(sol) polarization free energy of solvation -12.535 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -187.195 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.639 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.173 kcal (6) G-S(sol) free energy of system = (1) + (5) -196.834 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.23 seconds