Wall clock time and date at job start Sun Mar 7 2021 01:39:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45199 * 1 3 3 C 1.34227 * 116.99962 * 2 1 4 4 O 1.20821 * 120.00171 * 0.02562 * 3 2 1 5 5 C 1.50703 * 119.99935 * 179.97438 * 3 2 1 6 6 H 1.09003 * 109.47476 * 300.00455 * 5 3 2 7 7 C 1.52997 * 109.46779 * 60.00010 * 5 3 2 8 8 C 1.53005 * 109.47088 * 179.97438 * 7 5 3 9 9 C 1.52996 * 109.47104 * 300.00264 * 8 7 5 10 10 H 1.08998 * 109.47296 * 299.99727 * 9 8 7 11 11 N 1.46499 * 109.47313 * 179.97438 * 9 8 7 12 12 C 1.34781 * 120.00024 * 84.99514 * 11 9 8 13 13 O 1.21281 * 119.99907 * 0.02562 * 12 11 9 14 14 C 1.50693 * 119.99863 * 180.02562 * 12 11 9 15 15 O 1.42904 * 109.46927 * 180.02562 * 14 12 11 16 16 C 1.36001 * 116.99940 * 180.02562 * 15 14 12 17 17 C 1.39150 * 120.06992 * 179.97438 * 16 15 14 18 18 O 1.35996 * 120.07889 * 0.02562 * 17 16 15 19 19 C 1.42899 * 117.00293 * 179.97438 * 18 17 16 20 20 C 1.38570 * 119.85059 * 179.78936 * 17 16 15 21 21 C 1.38237 * 120.00157 * 0.49204 * 20 17 16 22 22 C 1.50699 * 119.93009 * 179.76371 * 21 20 17 23 23 O 1.42892 * 109.47249 * 299.72411 * 22 21 20 24 24 Si 1.86298 * 109.47032 * 179.71797 * 22 21 20 25 25 C 1.38261 * 120.14345 * 359.48513 * 21 20 17 26 26 C 1.38242 * 120.14306 * 0.27869 * 25 21 20 27 27 C 1.52997 * 109.47363 * 59.99905 * 9 8 7 28 28 C 1.52996 * 109.47188 * 180.02562 * 5 3 2 29 29 H 1.08998 * 109.47265 * 179.97438 * 1 2 3 30 30 H 1.08997 * 109.47418 * 300.00054 * 1 2 3 31 31 H 1.08997 * 109.46882 * 59.99743 * 1 2 3 32 32 H 1.09000 * 109.47577 * 300.00259 * 7 5 3 33 33 H 1.08998 * 109.47059 * 60.00341 * 7 5 3 34 34 H 1.09001 * 109.47042 * 180.02562 * 8 7 5 35 35 H 1.08998 * 109.46821 * 60.00282 * 8 7 5 36 36 H 0.96997 * 119.99966 * 265.00288 * 11 9 8 37 37 H 1.08998 * 109.47605 * 60.01099 * 14 12 11 38 38 H 1.09000 * 109.47769 * 300.00543 * 14 12 11 39 39 H 1.08996 * 109.47152 * 299.99846 * 19 18 17 40 40 H 1.08997 * 109.46545 * 60.00270 * 19 18 17 41 41 H 1.09003 * 109.46876 * 179.97438 * 19 18 17 42 42 H 1.08001 * 120.00138 * 180.22764 * 20 17 16 43 43 H 1.09004 * 109.46453 * 59.72479 * 22 21 20 44 44 H 0.96703 * 114.00176 * 299.99748 * 23 22 21 45 45 H 1.48506 * 109.99834 * 58.68765 * 24 22 21 46 46 H 1.48502 * 110.00011 * 180.02562 * 24 22 21 47 47 H 1.07997 * 119.92489 * 180.25473 * 25 21 20 48 48 H 1.08006 * 119.99281 * 179.97438 * 26 25 21 49 49 H 1.08998 * 109.47059 * 59.99677 * 27 9 8 50 50 H 1.09000 * 109.47577 * 179.97438 * 27 9 8 51 51 H 1.09001 * 109.47224 * 60.00374 * 28 5 3 52 52 H 1.08998 * 109.47296 * 300.00055 * 28 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4034 2.2093 0.0005 5 6 3.5663 1.2748 0.0006 6 1 3.9558 0.7808 0.8908 7 6 4.1138 0.5810 -1.2483 8 6 5.6417 0.6616 -1.2481 9 6 6.0750 2.1289 -1.2485 10 1 5.6853 2.6226 -2.1387 11 7 7.5380 2.2061 -1.2477 12 6 8.2170 2.1394 -2.4101 13 8 7.6168 2.0160 -3.4567 14 6 9.7218 2.2183 -2.4091 15 8 10.2044 2.1261 -3.7510 16 6 11.5518 2.1807 -3.9277 17 6 12.0912 2.0963 -5.2077 18 8 11.2722 1.9597 -6.2848 19 6 11.8958 1.8800 -7.5680 20 6 13.4644 2.1568 -5.3828 21 6 14.2959 2.2903 -4.2866 22 6 15.7894 2.3505 -4.4785 23 8 16.2384 1.1460 -5.1026 24 14 16.6212 2.5393 -2.8222 25 6 13.7599 2.3745 -3.0148 26 6 12.3905 2.3198 -2.8336 27 6 5.5276 2.8227 0.0004 28 6 4.0001 2.7420 0.0011 29 1 -0.3634 -1.0276 -0.0005 30 1 -0.3634 0.5138 0.8899 31 1 -0.3633 0.5139 -0.8899 32 1 3.8047 -0.4642 -1.2483 33 1 3.7244 1.0750 -2.1385 34 1 6.0317 0.1677 -2.1381 35 1 6.0314 0.1679 -0.3579 36 1 8.0179 2.3051 -0.4106 37 1 10.1284 1.3968 -1.8194 38 1 10.0358 3.1675 -1.9748 39 1 12.4699 2.7885 -7.7501 40 1 12.5618 1.0176 -7.5953 41 1 11.1312 1.7727 -8.3375 42 1 13.8854 2.0952 -6.3755 43 1 16.0403 3.2026 -5.1103 44 1 16.0480 0.3454 -4.5948 45 1 16.2613 1.3999 -1.9403 46 1 18.0945 2.6005 -2.9978 47 1 14.4125 2.4829 -2.1612 48 1 11.9744 2.3854 -1.8391 49 1 5.9173 2.3290 0.8906 50 1 5.8366 3.8680 0.0004 51 1 3.6102 3.2359 0.8911 52 1 3.6108 3.2364 -0.8889 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14475160_60476.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:39:13 Heat of formation + Delta-G solvation = -199.633025 kcal Electronic energy + Delta-G solvation = -34569.708156 eV Core-core repulsion = 29694.828841 eV Total energy + Delta-G solvation = -4874.879315 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 380.181 amu Computer time = 1.33 seconds Orbital eigenvalues (eV) -41.90454 -41.75231 -40.97457 -39.59808 -39.00286 -38.72403 -37.54754 -37.01413 -35.38728 -32.22749 -31.89153 -31.60180 -31.30576 -29.36365 -28.52642 -28.25575 -26.20193 -24.78109 -23.83023 -23.48846 -22.56800 -21.96738 -21.58059 -20.81836 -19.77986 -18.71828 -18.60787 -18.33984 -18.01487 -17.80077 -17.53031 -17.41054 -17.22218 -16.98321 -16.66444 -16.13849 -15.90991 -15.81658 -15.73994 -15.47411 -15.15813 -15.07436 -14.92615 -14.67259 -14.32841 -14.25042 -13.97658 -13.76427 -13.72151 -13.53171 -13.41734 -13.29386 -13.01630 -12.71379 -12.58422 -12.56170 -12.39724 -12.18953 -12.16157 -12.14433 -11.98138 -11.86274 -11.64112 -11.57414 -11.47904 -11.35028 -10.91310 -10.61656 -10.12929 -9.77008 -8.90542 -4.87768 0.18031 0.29173 1.08762 1.34304 1.49806 1.50524 1.64860 1.72324 2.00757 2.31613 2.56992 2.59720 3.40624 3.47103 3.52163 3.60864 3.66518 3.71435 3.87801 3.92383 3.94533 4.07005 4.07165 4.15391 4.16637 4.18617 4.26489 4.27474 4.29737 4.30244 4.31270 4.33864 4.37113 4.43801 4.57747 4.62271 4.65600 4.67069 4.67845 4.79194 4.93692 5.02149 5.05206 5.08940 5.11412 5.13961 5.25819 5.28782 5.35179 5.38028 5.47595 5.60934 5.98484 6.45576 6.49758 6.57482 6.64425 7.20170 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.363 6.363 3 C 0.461 3.539 4 O -0.541 6.541 5 C -0.074 4.074 6 H 0.141 0.859 7 C -0.104 4.104 8 C -0.121 4.121 9 C 0.143 3.857 10 H 0.060 0.940 11 N -0.703 5.703 12 C 0.512 3.488 13 O -0.573 6.573 14 C 0.034 3.966 15 O -0.315 6.315 16 C 0.085 3.915 17 C 0.076 3.924 18 O -0.335 6.335 19 C 0.021 3.979 20 C -0.153 4.153 21 C -0.117 4.117 22 C -0.085 4.085 23 O -0.551 6.551 24 Si 0.777 3.223 25 C -0.109 4.109 26 C -0.159 4.159 27 C -0.112 4.112 28 C -0.101 4.101 29 H 0.129 0.871 30 H 0.062 0.938 31 H 0.057 0.943 32 H 0.087 0.913 33 H 0.053 0.947 34 H 0.052 0.948 35 H 0.096 0.904 36 H 0.423 0.577 37 H 0.128 0.872 38 H 0.129 0.871 39 H 0.065 0.935 40 H 0.062 0.938 41 H 0.110 0.890 42 H 0.140 0.860 43 H 0.122 0.878 44 H 0.386 0.614 45 H -0.275 1.275 46 H -0.307 1.307 47 H 0.160 0.840 48 H 0.177 0.823 49 H 0.104 0.896 50 H 0.086 0.914 51 H 0.081 0.919 52 H 0.054 0.946 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.356 -0.123 8.864 9.479 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.279 6.279 3 C 0.305 3.695 4 O -0.431 6.431 5 C -0.093 4.093 6 H 0.159 0.841 7 C -0.142 4.142 8 C -0.159 4.159 9 C 0.038 3.962 10 H 0.078 0.922 11 N -0.357 5.357 12 C 0.298 3.702 13 O -0.452 6.452 14 C -0.044 4.044 15 O -0.229 6.229 16 C 0.040 3.960 17 C 0.030 3.970 18 O -0.249 6.249 19 C -0.074 4.074 20 C -0.171 4.171 21 C -0.118 4.118 22 C -0.194 4.194 23 O -0.359 6.359 24 Si 0.682 3.318 25 C -0.127 4.127 26 C -0.177 4.177 27 C -0.149 4.149 28 C -0.139 4.139 29 H 0.147 0.853 30 H 0.081 0.919 31 H 0.076 0.924 32 H 0.105 0.895 33 H 0.071 0.929 34 H 0.070 0.930 35 H 0.115 0.885 36 H 0.262 0.738 37 H 0.145 0.855 38 H 0.147 0.853 39 H 0.084 0.916 40 H 0.080 0.920 41 H 0.128 0.872 42 H 0.158 0.842 43 H 0.140 0.860 44 H 0.235 0.765 45 H -0.201 1.201 46 H -0.236 1.236 47 H 0.177 0.823 48 H 0.195 0.805 49 H 0.122 0.878 50 H 0.104 0.896 51 H 0.100 0.900 52 H 0.073 0.927 Dipole moment (debyes) X Y Z Total from point charges 3.067 0.119 8.066 8.631 hybrid contribution -0.360 -1.036 -0.844 1.384 sum 2.707 -0.917 7.222 7.767 Atomic orbital electron populations 1.23510 0.75190 1.05580 1.02344 1.86507 1.24641 1.33199 1.83557 1.24429 0.93150 0.80963 0.70938 1.90672 1.68195 1.37467 1.46730 1.21261 0.84913 0.99902 1.03175 0.84148 1.21434 0.95718 1.01612 0.95467 1.21853 0.94468 0.96254 1.03356 1.21019 0.79114 0.96340 0.99712 0.92214 1.45684 1.07126 1.74105 1.08802 1.20585 0.89842 0.75808 0.83991 1.90780 1.71245 1.49623 1.33506 1.22802 0.90980 1.06950 0.83651 1.86228 1.18928 1.88720 1.28999 1.18596 0.82774 1.02550 0.92091 1.18682 0.89700 1.02553 0.86046 1.86189 1.35459 1.88350 1.14950 1.23272 1.00343 1.02008 0.81737 1.21003 0.90093 1.05018 1.01033 1.20131 0.96076 1.02406 0.93144 1.25323 0.92513 0.89980 1.11537 1.86564 1.82286 1.16868 1.50177 0.94015 0.76033 0.87926 0.73874 1.21016 0.94899 1.00230 0.96539 1.21387 0.93435 1.04628 0.98251 1.21728 0.93772 1.02213 0.97211 1.21368 0.95909 0.93128 1.03469 0.85317 0.91899 0.92417 0.89485 0.92851 0.92959 0.88518 0.73816 0.85467 0.85310 0.91638 0.91961 0.87155 0.84228 0.86037 0.76465 1.20105 1.23591 0.82343 0.80532 0.87752 0.89581 0.90035 0.92671 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.56 113.37 1.20 1.18 16 2 O -0.36 -1.05 10.47 -51.39 -0.54 -1.59 16 3 C 0.46 1.89 7.25 71.24 0.52 2.41 16 4 O -0.54 -5.85 15.73 21.98 0.35 -5.50 16 5 C -0.07 0.22 2.63 -11.54 -0.03 0.19 16 6 H 0.14 -1.19 8.14 -2.39 -0.02 -1.21 16 7 C -0.10 0.21 5.14 30.60 0.16 0.37 16 8 C -0.12 0.38 5.49 30.59 0.17 0.55 16 9 C 0.14 -0.45 2.45 44.99 0.11 -0.34 16 10 H 0.06 0.25 7.58 -2.39 -0.02 0.23 16 11 N -0.70 4.18 5.08 -442.55 -2.25 1.94 16 12 C 0.51 1.24 7.87 87.65 0.69 1.93 16 13 O -0.57 -8.80 16.16 16.01 0.26 -8.55 16 14 C 0.03 -0.12 5.22 71.23 0.37 0.25 16 15 O -0.32 -2.50 9.46 -67.15 -0.63 -3.14 16 16 C 0.09 0.43 6.70 22.57 0.15 0.58 16 17 C 0.08 0.59 6.70 22.57 0.15 0.74 16 18 O -0.34 -3.75 10.28 -79.65 -0.82 -4.56 16 19 C 0.02 0.06 9.81 113.37 1.11 1.17 16 20 C -0.15 -0.55 8.60 22.35 0.19 -0.36 16 21 C -0.12 0.04 5.39 -19.86 -0.11 -0.07 16 22 C -0.09 0.14 2.82 71.24 0.20 0.34 16 23 O -0.55 -1.04 12.77 -148.98 -1.90 -2.95 16 24 Si 0.78 -3.39 29.78 68.60 2.04 -1.34 16 25 C -0.11 0.42 8.66 22.28 0.19 0.62 16 26 C -0.16 0.53 9.04 22.35 0.20 0.73 16 27 C -0.11 0.92 5.39 30.58 0.16 1.08 16 28 C -0.10 0.31 4.49 30.58 0.14 0.45 16 29 H 0.13 -0.80 8.14 -2.39 -0.02 -0.82 16 30 H 0.06 -0.02 8.13 -2.39 -0.02 -0.04 16 31 H 0.06 0.04 8.13 -2.39 -0.02 0.02 16 32 H 0.09 -0.23 8.11 -2.39 -0.02 -0.25 16 33 H 0.05 0.10 8.14 -2.39 -0.02 0.09 16 34 H 0.05 0.14 8.14 -2.39 -0.02 0.12 16 35 H 0.10 -0.78 8.14 -2.39 -0.02 -0.80 16 36 H 0.42 -6.20 8.60 -92.71 -0.80 -7.00 16 37 H 0.13 -1.36 7.66 -2.39 -0.02 -1.38 16 38 H 0.13 -1.39 7.66 -2.39 -0.02 -1.41 16 39 H 0.07 0.01 7.65 -2.39 -0.02 -0.01 16 40 H 0.06 0.04 7.67 -2.39 -0.02 0.03 16 41 H 0.11 0.01 8.14 -2.39 -0.02 -0.01 16 42 H 0.14 0.34 6.30 -2.91 -0.02 0.32 16 43 H 0.12 -0.33 7.96 -2.38 -0.02 -0.35 16 44 H 0.39 -1.42 8.70 -74.06 -0.64 -2.07 16 45 H -0.27 0.46 7.11 99.48 0.71 1.17 16 46 H -0.31 -1.27 7.11 99.48 0.71 -0.56 16 47 H 0.16 -1.52 4.87 -2.91 -0.01 -1.54 16 48 H 0.18 -2.10 6.30 -2.91 -0.02 -2.12 16 49 H 0.10 -1.41 8.14 -2.39 -0.02 -1.43 16 50 H 0.09 -0.75 8.14 -2.39 -0.02 -0.77 16 51 H 0.08 -0.23 8.10 -2.39 -0.02 -0.25 16 52 H 0.05 0.09 8.10 -2.39 -0.02 0.07 16 Total: 0.00 -35.48 424.83 1.64 -33.83 By element: Atomic # 1 Polarization: -19.52 SS G_CDS: -0.44 Total: -19.96 kcal Atomic # 6 Polarization: 6.24 SS G_CDS: 5.58 Total: 11.82 kcal Atomic # 7 Polarization: 4.18 SS G_CDS: -2.25 Total: 1.94 kcal Atomic # 8 Polarization: -23.00 SS G_CDS: -3.29 Total: -26.29 kcal Atomic # 14 Polarization: -3.39 SS G_CDS: 2.04 Total: -1.34 kcal Total: -35.48 1.64 -33.83 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14475160_60476.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -165.799 kcal (2) G-P(sol) polarization free energy of solvation -35.478 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -201.277 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.644 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.834 kcal (6) G-S(sol) free energy of system = (1) + (5) -199.633 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.33 seconds