Wall clock time and date at job start Sun Mar 7 2021 01:39:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45202 * 1 3 3 C 1.34230 * 116.99836 * 2 1 4 4 O 1.20833 * 119.99930 * 359.97438 * 3 2 1 5 5 C 1.50697 * 120.00262 * 180.27336 * 3 2 1 6 6 H 1.09004 * 109.46801 * 299.72165 * 5 3 2 7 7 C 1.53006 * 109.47194 * 59.71653 * 5 3 2 8 8 C 1.53003 * 109.47147 * 180.02562 * 7 5 3 9 9 C 1.53003 * 109.47020 * 300.00408 * 8 7 5 10 10 H 1.08998 * 109.46943 * 299.99521 * 9 8 7 11 11 N 1.46498 * 109.46778 * 180.02562 * 9 8 7 12 12 C 1.34779 * 120.00387 * 84.99827 * 11 9 8 13 13 O 1.21284 * 119.99554 * 359.97438 * 12 11 9 14 14 C 1.50693 * 120.00333 * 180.02562 * 12 11 9 15 15 O 1.42893 * 109.47575 * 180.02562 * 14 12 11 16 16 C 1.35917 * 117.00673 * 179.97438 * 15 14 12 17 17 C 1.38780 * 120.06205 * 180.02562 * 16 15 14 18 18 Br 1.89104 * 120.03704 * 0.02562 * 17 16 15 19 19 C 1.38246 * 119.92870 * 180.02562 * 17 16 15 20 20 C 1.38245 * 120.04293 * 359.97438 * 19 17 16 21 21 C 1.50698 * 119.93621 * 179.97438 * 20 19 17 22 22 O 1.42904 * 109.47128 * 65.00515 * 21 20 19 23 23 Si 1.86302 * 109.46709 * 185.00050 * 21 20 19 24 24 C 1.38280 * 120.11760 * 359.97438 * 20 19 17 25 25 C 1.38146 * 120.07415 * 359.76749 * 24 20 19 26 26 C 1.53000 * 109.47308 * 60.00062 * 9 8 7 27 27 C 1.52996 * 109.47491 * 179.72204 * 5 3 2 28 28 H 1.09004 * 109.46770 * 60.01042 * 1 2 3 29 29 H 1.09001 * 109.46882 * 180.02562 * 1 2 3 30 30 H 1.08998 * 109.47630 * 300.00638 * 1 2 3 31 31 H 1.09001 * 109.47378 * 300.00588 * 7 5 3 32 32 H 1.09004 * 109.46828 * 60.00529 * 7 5 3 33 33 H 1.08994 * 109.46775 * 180.02562 * 8 7 5 34 34 H 1.08998 * 109.46872 * 59.99973 * 8 7 5 35 35 H 0.97003 * 119.99379 * 264.99763 * 11 9 8 36 36 H 1.09009 * 109.46856 * 299.99659 * 14 12 11 37 37 H 1.08999 * 109.47525 * 59.99300 * 14 12 11 38 38 H 1.07997 * 119.97910 * 179.97438 * 19 17 16 39 39 H 1.08995 * 109.47364 * 304.99847 * 21 20 19 40 40 H 0.96700 * 113.99742 * 179.97438 * 22 21 20 41 41 H 1.48500 * 110.00040 * 178.68541 * 23 21 20 42 42 H 1.48499 * 110.00121 * 300.00119 * 23 21 20 43 43 H 1.08003 * 119.96095 * 180.02562 * 24 20 19 44 44 H 1.07995 * 120.02299 * 180.25693 * 25 24 20 45 45 H 1.09001 * 109.46739 * 180.02562 * 26 9 8 46 46 H 1.08996 * 109.46830 * 59.99776 * 26 9 8 47 47 H 1.09004 * 109.47066 * 299.99799 * 27 5 3 48 48 H 1.08994 * 109.47405 * 59.99969 * 27 5 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4032 2.2094 -0.0005 5 6 3.5663 1.2750 -0.0062 6 1 3.9595 0.7833 0.8836 7 6 4.1084 0.5780 -1.2558 8 6 5.6364 0.6576 -1.2617 9 6 6.0705 2.1248 -1.2671 10 1 5.6776 2.6166 -2.1569 11 7 7.5335 2.2010 -1.2735 12 6 8.2070 2.1316 -2.4389 13 8 7.6018 2.0056 -3.4823 14 6 9.7119 2.2094 -2.4453 15 8 10.1881 2.1143 -3.7892 16 6 11.5337 2.1686 -3.9725 17 6 12.0652 2.0828 -5.2516 18 35 10.9178 1.8909 -6.7425 19 6 13.4344 2.1378 -5.4348 20 6 14.2733 2.2786 -4.3451 21 6 15.7655 2.3377 -4.5475 22 8 16.1002 3.5170 -5.2820 23 14 16.6158 2.3760 -2.8903 24 6 13.7457 2.3654 -3.0699 25 6 12.3780 2.3163 -2.8817 26 6 5.5284 2.8217 -0.0176 27 6 4.0000 2.7422 -0.0119 28 1 -0.3633 0.5137 -0.8901 29 1 -0.3633 -1.0277 0.0005 30 1 -0.3634 0.5139 0.8899 31 1 3.7994 -0.4673 -1.2517 32 1 3.7151 1.0697 -2.1455 33 1 6.0225 0.1615 -2.1521 34 1 6.0293 0.1657 -0.3719 35 1 8.0175 2.3014 -0.4388 36 1 10.0284 3.1593 -2.0145 37 1 10.1207 1.3889 -1.8557 38 1 13.8488 2.0707 -6.4298 39 1 16.0919 1.4587 -5.1031 40 1 17.0470 3.6207 -5.4491 41 1 18.0889 2.4023 -3.0758 42 1 16.1792 3.5700 -2.1228 43 1 14.4035 2.4758 -2.2204 44 1 11.9667 2.3883 -1.8858 45 1 5.8374 3.8670 -0.0217 46 1 5.9214 2.3297 0.8721 47 1 3.6067 3.2339 -0.9017 48 1 3.6139 3.2387 0.8782 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14475160_6201210.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 01:39:17 Heat of formation + Delta-G solvation = -158.358989 kcal Electronic energy + Delta-G solvation = -32109.019571 eV Core-core repulsion = 27370.331841 eV Total energy + Delta-G solvation = -4738.687730 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 428.076 amu Computer time = 1.31 seconds Orbital eigenvalues (eV) -41.88311 -41.61560 -40.79498 -39.36816 -38.71714 -37.55492 -37.36915 -35.37928 -33.63779 -32.12411 -31.89238 -31.61378 -30.43687 -29.39904 -28.36185 -26.31615 -24.83354 -23.83990 -23.82479 -22.32131 -21.94346 -21.57119 -20.81719 -19.54645 -18.69839 -18.58178 -18.38367 -17.82667 -17.52537 -17.40584 -17.36179 -17.02128 -16.71576 -15.87995 -15.74373 -15.66387 -15.38560 -15.15552 -15.01361 -14.94512 -14.62658 -14.25981 -14.15677 -14.07139 -13.93128 -13.89206 -13.60307 -13.51735 -13.29014 -13.01463 -12.69872 -12.58227 -12.39899 -12.27218 -12.18612 -12.09461 -11.86164 -11.83916 -11.78172 -11.57236 -11.47667 -11.34516 -11.20413 -10.91026 -10.47976 -10.11862 -9.95486 -9.30559 -4.89568 -0.04614 0.13222 0.64376 1.08767 1.33123 1.43740 1.50767 1.64405 1.72236 1.98457 2.37349 2.53440 3.35659 3.46082 3.51233 3.59890 3.66267 3.69441 3.84127 3.89942 3.93633 4.05683 4.06928 4.12059 4.14663 4.18948 4.26708 4.27609 4.29499 4.31579 4.34211 4.44228 4.51059 4.62738 4.65450 4.67853 4.79540 4.85463 4.94270 4.99994 5.05681 5.09830 5.11856 5.26138 5.26681 5.29174 5.35407 5.46438 5.50610 6.08558 6.51859 6.60010 6.64528 7.20608 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.363 6.363 3 C 0.460 3.540 4 O -0.542 6.542 5 C -0.074 4.074 6 H 0.141 0.859 7 C -0.104 4.104 8 C -0.120 4.120 9 C 0.143 3.857 10 H 0.059 0.941 11 N -0.703 5.703 12 C 0.512 3.488 13 O -0.569 6.569 14 C 0.031 3.969 15 O -0.305 6.305 16 C 0.149 3.851 17 C -0.145 4.145 18 Br -0.054 7.054 19 C -0.036 4.036 20 C -0.115 4.115 21 C -0.088 4.088 22 O -0.561 6.561 23 Si 0.775 3.225 24 C -0.058 4.058 25 C -0.188 4.188 26 C -0.112 4.112 27 C -0.101 4.101 28 H 0.057 0.943 29 H 0.129 0.871 30 H 0.062 0.938 31 H 0.087 0.913 32 H 0.052 0.948 33 H 0.053 0.947 34 H 0.097 0.903 35 H 0.423 0.577 36 H 0.129 0.871 37 H 0.136 0.864 38 H 0.137 0.863 39 H 0.093 0.907 40 H 0.395 0.605 41 H -0.291 1.291 42 H -0.288 1.288 43 H 0.162 0.838 44 H 0.182 0.818 45 H 0.084 0.916 46 H 0.105 0.895 47 H 0.054 0.946 48 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.448 -4.337 10.646 12.721 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.279 6.279 3 C 0.305 3.695 4 O -0.431 6.431 5 C -0.092 4.092 6 H 0.159 0.841 7 C -0.143 4.143 8 C -0.159 4.159 9 C 0.039 3.961 10 H 0.078 0.922 11 N -0.358 5.358 12 C 0.298 3.702 13 O -0.447 6.447 14 C -0.047 4.047 15 O -0.217 6.217 16 C 0.101 3.899 17 C -0.225 4.225 18 Br 0.032 6.968 19 C -0.056 4.056 20 C -0.116 4.116 21 C -0.196 4.196 22 O -0.371 6.371 23 Si 0.680 3.320 24 C -0.075 4.075 25 C -0.207 4.207 26 C -0.149 4.149 27 C -0.139 4.139 28 H 0.076 0.924 29 H 0.147 0.853 30 H 0.081 0.919 31 H 0.105 0.895 32 H 0.071 0.929 33 H 0.072 0.928 34 H 0.115 0.885 35 H 0.262 0.738 36 H 0.146 0.854 37 H 0.154 0.846 38 H 0.155 0.845 39 H 0.111 0.889 40 H 0.246 0.754 41 H -0.218 1.218 42 H -0.215 1.215 43 H 0.179 0.821 44 H 0.200 0.800 45 H 0.103 0.897 46 H 0.123 0.877 47 H 0.073 0.927 48 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges 4.068 -3.721 9.734 11.186 hybrid contribution 0.382 1.010 -0.900 1.406 sum 4.450 -2.711 8.833 10.255 Atomic orbital electron populations 1.23512 0.75204 1.05587 1.02320 1.86508 1.24624 1.33180 1.83550 1.24451 0.93183 0.80959 0.70921 1.90676 1.68213 1.37495 1.46760 1.21264 0.84894 0.99842 1.03240 0.84109 1.21440 0.95853 1.01587 0.95373 1.21849 0.94359 0.96179 1.03464 1.21010 0.79134 0.96380 0.99601 0.92245 1.45678 1.07139 1.74130 1.08825 1.20514 0.89730 0.75973 0.84015 1.90797 1.70846 1.49393 1.33639 1.22893 0.91319 1.07321 0.83126 1.86246 1.18554 1.87419 1.29512 1.18782 0.82992 0.95078 0.93029 1.21258 0.94396 1.15795 0.91039 1.96750 1.64710 1.96838 1.38537 1.20889 0.89559 0.94797 1.00370 1.19412 0.94464 1.04433 0.93303 1.25097 0.95473 0.90314 1.08733 1.86559 1.31145 1.43623 1.75759 0.94159 0.76100 0.86196 0.75586 1.21247 0.95293 0.94430 0.96578 1.21547 0.93263 1.06904 0.98971 1.21746 0.93758 1.02125 0.97320 1.21385 0.95940 0.93177 1.03395 0.92437 0.85292 0.91927 0.89456 0.92911 0.92776 0.88454 0.73842 0.85374 0.84633 0.84497 0.88913 0.75438 1.21806 1.21494 0.82116 0.80041 0.89737 0.87703 0.92729 0.90137 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 113.37 1.20 1.18 16 2 O -0.36 -0.99 10.46 -51.41 -0.54 -1.53 16 3 C 0.46 1.82 7.26 71.23 0.52 2.34 16 4 O -0.54 -5.85 15.73 21.94 0.35 -5.50 16 5 C -0.07 0.24 2.63 -11.54 -0.03 0.21 16 6 H 0.14 -1.24 8.14 -2.38 -0.02 -1.26 16 7 C -0.10 0.26 5.13 30.60 0.16 0.42 16 8 C -0.12 0.49 5.49 30.60 0.17 0.65 16 9 C 0.14 -0.56 2.45 44.99 0.11 -0.45 16 10 H 0.06 0.21 7.58 -2.39 -0.02 0.19 16 11 N -0.70 4.97 5.08 -442.53 -2.25 2.73 16 12 C 0.51 0.35 7.87 87.65 0.69 1.04 16 13 O -0.57 -7.59 16.16 15.99 0.26 -7.33 16 14 C 0.03 -0.17 5.22 71.23 0.37 0.20 16 15 O -0.30 -1.48 9.00 -73.58 -0.66 -2.15 16 16 C 0.15 0.46 6.68 22.52 0.15 0.61 16 17 C -0.14 -0.99 6.24 22.40 0.14 -0.85 16 18 Br -0.05 -0.55 33.16 -20.37 -0.68 -1.23 16 19 C -0.04 -0.16 9.42 22.27 0.21 0.05 16 20 C -0.11 -0.05 5.38 -19.85 -0.11 -0.16 16 21 C -0.09 0.22 2.79 71.24 0.20 0.42 16 22 O -0.56 -0.65 12.81 -148.98 -1.91 -2.56 16 23 Si 0.78 -4.32 29.84 68.60 2.05 -2.28 16 24 C -0.06 0.21 8.66 22.26 0.19 0.41 16 25 C -0.19 0.82 9.04 22.36 0.20 1.02 16 26 C -0.11 0.96 5.39 30.61 0.17 1.12 16 27 C -0.10 0.33 4.50 30.61 0.14 0.47 16 28 H 0.06 0.04 8.13 -2.38 -0.02 0.02 16 29 H 0.13 -0.81 8.14 -2.39 -0.02 -0.83 16 30 H 0.06 -0.02 8.13 -2.39 -0.02 -0.04 16 31 H 0.09 -0.27 8.11 -2.39 -0.02 -0.29 16 32 H 0.05 0.08 8.14 -2.38 -0.02 0.07 16 33 H 0.05 0.08 8.14 -2.39 -0.02 0.06 16 34 H 0.10 -0.87 8.14 -2.39 -0.02 -0.89 16 35 H 0.42 -6.62 8.60 -92.71 -0.80 -7.42 16 36 H 0.13 -1.56 7.65 -2.38 -0.02 -1.58 16 37 H 0.14 -1.82 7.68 -2.39 -0.02 -1.83 16 38 H 0.14 0.55 8.06 -2.91 -0.02 0.53 16 39 H 0.09 -0.54 7.96 -2.39 -0.02 -0.55 16 40 H 0.40 -2.67 8.74 -74.06 -0.65 -3.31 16 41 H -0.29 0.12 7.11 99.48 0.71 0.83 16 42 H -0.29 -0.03 7.05 99.48 0.70 0.68 16 43 H 0.16 -1.47 4.86 -2.91 -0.01 -1.48 16 44 H 0.18 -2.42 6.30 -2.91 -0.02 -2.44 16 45 H 0.08 -0.75 8.14 -2.39 -0.02 -0.77 16 46 H 0.10 -1.46 8.14 -2.39 -0.02 -1.48 16 47 H 0.05 0.09 8.10 -2.38 -0.02 0.07 16 48 H 0.08 -0.22 8.10 -2.39 -0.02 -0.24 16 Total: 0.00 -33.83 416.11 0.69 -33.14 By element: Atomic # 1 Polarization: -21.58 SS G_CDS: -0.40 Total: -21.98 kcal Atomic # 6 Polarization: 4.21 SS G_CDS: 4.47 Total: 8.68 kcal Atomic # 7 Polarization: 4.97 SS G_CDS: -2.25 Total: 2.73 kcal Atomic # 8 Polarization: -16.56 SS G_CDS: -2.50 Total: -19.06 kcal Atomic # 14 Polarization: -4.32 SS G_CDS: 2.05 Total: -2.28 kcal Atomic # 35 Polarization: -0.55 SS G_CDS: -0.68 Total: -1.23 kcal Total: -33.83 0.69 -33.14 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14475160_6201210.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -125.221 kcal (2) G-P(sol) polarization free energy of solvation -33.828 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -159.050 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.691 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.138 kcal (6) G-S(sol) free energy of system = (1) + (5) -158.359 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.31 seconds