Wall clock time and date at job start Sun Mar 7 2021 02:03:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53003 * 1 3 3 C 1.53002 * 109.46995 * 2 1 4 4 C 1.52994 * 109.47327 * 119.99800 * 2 1 3 5 5 H 1.09003 * 109.47334 * 300.00549 * 4 2 1 6 6 C 1.53002 * 109.46920 * 60.00154 * 4 2 1 7 7 C 1.52995 * 109.47266 * 179.97438 * 6 4 2 8 8 C 1.53003 * 109.47278 * 300.00028 * 7 6 4 9 9 H 1.08997 * 109.46925 * 300.00057 * 8 7 6 10 10 N 1.46497 * 109.47321 * 179.97438 * 8 7 6 11 11 C 1.34776 * 120.00202 * 84.99853 * 10 8 7 12 12 O 1.21703 * 119.99883 * 5.10211 * 11 10 8 13 13 C 1.46670 * 120.00508 * 185.10110 * 11 10 8 14 14 C 1.37880 * 126.23328 * 355.01519 * 13 11 10 15 15 C 1.39833 * 107.08704 * 179.97438 * 14 13 11 16 16 C 1.50696 * 126.06706 * 180.02562 * 15 14 13 17 17 O 1.42902 * 109.47314 * 65.02491 * 16 15 14 18 18 Si 1.86296 * 109.47098 * 185.02539 * 16 15 14 19 19 C 1.35457 * 107.86305 * 0.02562 * 15 14 13 20 20 N 1.35528 * 108.87408 * 359.97438 * 19 15 14 21 21 C 1.46505 * 125.67819 * 180.02562 * 20 19 15 22 22 C 1.53002 * 109.46995 * 59.99806 * 8 7 6 23 23 C 1.52995 * 109.47266 * 300.00201 * 22 8 7 24 24 H 1.09000 * 109.47093 * 60.00009 * 1 2 3 25 25 H 1.09001 * 109.46889 * 179.97438 * 1 2 3 26 26 H 1.08997 * 109.46925 * 299.99750 * 1 2 3 27 27 H 1.08997 * 109.46925 * 240.00250 * 2 1 3 28 28 H 1.09001 * 109.47394 * 180.02562 * 3 2 1 29 29 H 1.09001 * 109.46990 * 300.00442 * 3 2 1 30 30 H 1.09003 * 109.46795 * 59.99985 * 3 2 1 31 31 H 1.09001 * 109.47394 * 299.99946 * 6 4 2 32 32 H 1.08997 * 109.47080 * 59.99705 * 6 4 2 33 33 H 1.09001 * 109.47240 * 180.02562 * 7 6 4 34 34 H 1.08997 * 109.47189 * 59.99923 * 7 6 4 35 35 H 0.96999 * 120.00193 * 265.00324 * 10 8 7 36 36 H 1.07999 * 126.45072 * 359.97438 * 14 13 11 37 37 H 1.09002 * 109.46953 * 305.02396 * 16 15 14 38 38 H 0.96700 * 113.99959 * 180.02562 * 17 16 15 39 39 H 1.48498 * 110.00400 * 300.00102 * 18 16 15 40 40 H 1.48507 * 110.00150 * 61.31729 * 18 16 15 41 41 H 1.08007 * 125.55925 * 179.73910 * 19 15 14 42 42 H 1.08996 * 109.46988 * 95.53218 * 21 20 19 43 43 H 1.08997 * 109.46634 * 215.52881 * 21 20 19 44 44 H 1.09000 * 109.46974 * 335.52756 * 21 20 19 45 45 H 1.09003 * 109.46795 * 59.99985 * 22 8 7 46 46 H 1.08991 * 109.47388 * 179.97438 * 22 8 7 47 47 H 1.09001 * 109.47240 * 179.97438 * 23 22 8 48 48 H 1.08997 * 109.47189 * 300.00077 * 23 22 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0401 -0.7212 1.2492 5 1 1.6767 -0.2074 2.1392 6 6 1.5301 -2.1637 1.2492 7 6 2.0406 -2.8851 2.4981 8 6 3.5706 -2.8851 2.4975 9 1 3.9336 -3.3988 1.6072 10 7 4.0595 -3.5754 3.6936 11 6 4.1882 -4.9170 3.6922 12 8 3.9877 -5.5464 2.6700 13 6 4.5699 -5.6185 4.9224 14 6 4.9195 -5.0318 6.1201 15 6 5.2060 -6.0663 7.0162 16 6 5.6337 -5.9034 8.4520 17 8 4.5726 -5.3065 9.2003 18 14 6.0391 -7.5728 9.1725 19 6 5.0309 -7.2409 6.3646 20 7 4.6442 -6.9826 5.0916 21 6 4.3533 -7.9878 4.0663 22 6 4.0806 -1.4426 2.4975 23 6 3.5701 -0.7212 1.2486 24 1 -0.3633 0.5138 -0.8900 25 1 -0.3633 -1.0277 -0.0005 26 1 -0.3633 0.5138 0.8900 27 1 1.8933 -0.5138 -0.8900 28 1 3.1300 1.4426 -0.0005 29 1 1.6766 1.9564 -0.8900 30 1 1.6766 1.9563 0.8900 31 1 0.4401 -2.1638 1.2492 32 1 1.8934 -2.6775 0.3592 33 1 1.6777 -3.9129 2.4978 34 1 1.6777 -2.3715 3.3883 35 1 4.2905 -3.0669 4.4867 36 1 4.9638 -3.9727 6.3270 37 1 6.5153 -5.2639 8.4982 38 1 4.7786 -5.1711 10.1354 39 1 4.8454 -8.4542 9.1154 40 1 7.1626 -8.1904 8.4228 41 1 5.1793 -8.2228 6.7891 42 1 3.2810 -8.1817 4.0415 43 1 4.6785 -7.6191 3.0935 44 1 4.8841 -8.9104 4.3012 45 1 3.7176 -0.9289 3.3877 46 1 5.1705 -1.4425 2.4975 47 1 3.9330 0.3066 1.2488 48 1 3.9330 -1.2348 0.3584 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14589126_10803934.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:03:51 Heat of formation + Delta-G solvation = -41.654863 kcal Electronic energy + Delta-G solvation = -25915.554678 eV Core-core repulsion = 22357.743330 eV Total energy + Delta-G solvation = -3557.811349 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 307.193 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -42.53184 -40.83983 -39.45023 -37.63903 -36.64044 -34.47985 -33.71471 -31.95228 -31.20899 -29.23576 -28.30630 -28.06920 -25.68019 -24.55713 -23.50094 -22.94672 -21.31673 -21.01623 -20.65147 -20.24002 -18.61392 -18.26239 -17.31522 -17.11696 -16.65262 -16.24094 -15.71891 -15.39199 -15.34148 -15.13272 -15.10814 -14.94400 -14.55778 -14.46522 -14.27011 -14.15781 -14.06566 -13.66736 -13.41529 -13.22011 -13.15882 -13.12872 -12.79418 -12.69395 -12.41409 -12.30333 -12.13173 -12.07812 -11.90772 -11.66044 -11.36838 -11.20822 -10.97468 -10.83978 -10.22656 -10.03865 -9.66587 -9.23996 -4.99120 0.46665 1.33058 1.46602 1.59665 1.70428 2.01052 2.32360 2.42200 3.54669 3.60797 3.64591 3.70474 3.82187 3.83561 3.89404 3.97953 4.08288 4.12071 4.27640 4.28079 4.29218 4.36138 4.36399 4.48644 4.51518 4.59145 4.61083 4.63304 4.64209 4.76758 4.77080 4.78538 4.94766 4.96982 5.00483 5.05469 5.10578 5.15315 5.16937 5.18646 5.25155 5.33604 5.35068 5.48286 5.51923 5.58232 5.68156 5.91036 6.10244 6.51237 6.73747 7.22326 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C -0.093 4.093 3 C -0.151 4.151 4 C -0.084 4.084 5 H 0.072 0.928 6 C -0.113 4.113 7 C -0.129 4.129 8 C 0.148 3.852 9 H 0.090 0.910 10 N -0.716 5.716 11 C 0.593 3.407 12 O -0.547 6.547 13 C -0.052 4.052 14 C -0.110 4.110 15 C -0.162 4.162 16 C -0.033 4.033 17 O -0.548 6.548 18 Si 0.682 3.318 19 C 0.020 3.980 20 N -0.404 5.404 21 C 0.065 3.935 22 C -0.126 4.126 23 C -0.112 4.112 24 H 0.053 0.947 25 H 0.057 0.943 26 H 0.054 0.946 27 H 0.069 0.931 28 H 0.057 0.943 29 H 0.053 0.947 30 H 0.054 0.946 31 H 0.069 0.931 32 H 0.064 0.936 33 H 0.065 0.935 34 H 0.065 0.935 35 H 0.403 0.597 36 H 0.147 0.853 37 H 0.070 0.930 38 H 0.379 0.621 39 H -0.254 1.254 40 H -0.257 1.257 41 H 0.164 0.836 42 H 0.080 0.920 43 H 0.104 0.896 44 H 0.085 0.915 45 H 0.069 0.931 46 H 0.070 0.930 47 H 0.072 0.928 48 H 0.065 0.935 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.800 1.999 3.433 4.361 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.208 4.208 2 C -0.111 4.111 3 C -0.208 4.208 4 C -0.102 4.102 5 H 0.090 0.910 6 C -0.151 4.151 7 C -0.167 4.167 8 C 0.044 3.956 9 H 0.108 0.892 10 N -0.366 5.366 11 C 0.381 3.619 12 O -0.426 6.426 13 C -0.165 4.165 14 C -0.136 4.136 15 C -0.169 4.169 16 C -0.145 4.145 17 O -0.353 6.353 18 Si 0.583 3.417 19 C -0.117 4.117 20 N -0.075 5.075 21 C -0.075 4.075 22 C -0.164 4.164 23 C -0.150 4.150 24 H 0.072 0.928 25 H 0.076 0.924 26 H 0.073 0.927 27 H 0.088 0.912 28 H 0.076 0.924 29 H 0.072 0.928 30 H 0.073 0.927 31 H 0.088 0.912 32 H 0.083 0.917 33 H 0.084 0.916 34 H 0.084 0.916 35 H 0.238 0.762 36 H 0.165 0.835 37 H 0.088 0.912 38 H 0.226 0.774 39 H -0.178 1.178 40 H -0.182 1.182 41 H 0.181 0.819 42 H 0.098 0.902 43 H 0.123 0.877 44 H 0.103 0.897 45 H 0.088 0.912 46 H 0.089 0.911 47 H 0.091 0.909 48 H 0.084 0.916 Dipole moment (debyes) X Y Z Total from point charges 1.312 0.396 1.637 2.134 hybrid contribution 0.035 0.416 0.038 0.419 sum 1.347 0.811 1.675 2.297 Atomic orbital electron populations 1.21909 0.95235 1.01900 1.01770 1.21141 0.95796 0.96166 0.97996 1.21910 1.01159 0.95915 1.01796 1.21259 0.95009 0.95676 0.98294 0.91001 1.21610 1.00845 0.94941 0.97715 1.21927 0.94795 1.01192 0.98826 1.21052 0.93942 0.92475 0.88126 0.89152 1.45727 1.67436 1.06046 1.17395 1.16920 0.76559 0.82267 0.86141 1.90800 1.51734 1.66507 1.33552 1.20067 1.16633 0.83263 0.96562 1.21170 1.02697 0.99063 0.90679 1.18691 1.11028 0.92498 0.94650 1.23933 0.92130 1.08257 0.90165 1.86512 1.39947 1.84167 1.24711 0.95309 0.80486 0.76222 0.89633 1.21679 1.06033 0.99248 0.84724 1.43764 1.48216 1.05516 1.10048 1.22337 1.02953 0.90398 0.91845 1.21813 1.01031 0.94031 0.99567 1.21600 0.95343 1.00708 0.97380 0.92769 0.92372 0.92709 0.91222 0.92376 0.92771 0.92702 0.91210 0.91704 0.91595 0.91641 0.76240 0.83512 0.91172 0.77386 1.17830 1.18172 0.81863 0.90186 0.87721 0.89665 0.91207 0.91148 0.90918 0.91587 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.08 8.84 37.16 0.33 0.41 16 2 C -0.09 0.07 2.51 -90.62 -0.23 -0.16 16 3 C -0.15 0.13 8.84 37.16 0.33 0.46 16 4 C -0.08 0.08 1.78 -90.62 -0.16 -0.08 16 5 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 6 C -0.11 0.02 4.85 -26.73 -0.13 -0.11 16 7 C -0.13 -0.09 5.49 -26.73 -0.15 -0.23 16 8 C 0.15 0.08 2.50 -67.93 -0.17 -0.09 16 9 H 0.09 0.23 7.51 -51.93 -0.39 -0.16 16 10 N -0.72 -0.66 5.06 -55.11 -0.28 -0.94 16 11 C 0.59 2.27 7.74 -12.86 -0.10 2.17 16 12 O -0.55 -3.53 14.40 5.19 0.07 -3.46 16 13 C -0.05 -0.19 6.89 -81.98 -0.56 -0.75 16 14 C -0.11 -0.28 10.29 -39.12 -0.40 -0.69 16 15 C -0.16 -0.46 5.46 -105.02 -0.57 -1.04 16 16 C -0.03 -0.01 3.01 36.00 0.11 0.10 16 17 O -0.55 -0.29 12.86 -35.23 -0.45 -0.74 16 18 Si 0.68 -0.72 30.60 -169.99 -5.20 -5.92 16 19 C 0.02 0.06 9.93 -16.91 -0.17 -0.11 16 20 N -0.40 -1.34 3.16 -120.23 -0.38 -1.72 16 21 C 0.07 0.08 10.49 59.85 0.63 0.71 16 22 C -0.13 0.16 5.39 -26.73 -0.14 0.02 16 23 C -0.11 0.14 4.85 -26.73 -0.13 0.01 16 24 H 0.05 -0.02 8.14 -51.93 -0.42 -0.45 16 25 H 0.06 -0.03 6.43 -51.93 -0.33 -0.36 16 26 H 0.05 -0.02 8.14 -51.93 -0.42 -0.45 16 27 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 28 H 0.06 -0.07 6.43 -51.93 -0.33 -0.40 16 29 H 0.05 -0.04 8.14 -51.93 -0.42 -0.46 16 30 H 0.05 -0.04 8.14 -51.93 -0.42 -0.47 16 31 H 0.07 -0.01 6.43 -51.93 -0.33 -0.34 16 32 H 0.06 0.03 8.14 -51.93 -0.42 -0.39 16 33 H 0.07 0.18 8.14 -51.93 -0.42 -0.25 16 34 H 0.06 0.02 8.14 -51.93 -0.42 -0.40 16 35 H 0.40 -0.49 7.50 -40.82 -0.31 -0.80 16 36 H 0.15 0.03 7.45 -52.49 -0.39 -0.36 16 37 H 0.07 -0.09 7.96 -51.93 -0.41 -0.50 16 38 H 0.38 -1.74 8.74 45.56 0.40 -1.34 16 39 H -0.25 -0.52 7.11 56.52 0.40 -0.12 16 40 H -0.26 -0.36 7.11 56.52 0.40 0.04 16 41 H 0.16 0.20 6.21 -52.48 -0.33 -0.13 16 42 H 0.08 0.06 8.14 -51.93 -0.42 -0.36 16 43 H 0.10 0.24 6.54 -51.93 -0.34 -0.09 16 44 H 0.08 -0.10 8.12 -51.93 -0.42 -0.52 16 45 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 46 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 47 H 0.07 -0.12 6.43 -51.93 -0.33 -0.45 16 48 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 LS Contribution 370.74 15.07 5.59 5.59 Total: 0.00 -7.40 370.74 -10.39 -17.79 By element: Atomic # 1 Polarization: -3.00 SS G_CDS: -8.22 Total: -11.21 kcal Atomic # 6 Polarization: 2.14 SS G_CDS: -1.52 Total: 0.61 kcal Atomic # 7 Polarization: -2.00 SS G_CDS: -0.66 Total: -2.66 kcal Atomic # 8 Polarization: -3.82 SS G_CDS: -0.38 Total: -4.20 kcal Atomic # 14 Polarization: -0.72 SS G_CDS: -5.20 Total: -5.92 kcal Total LS contribution 5.59 Total: 5.59 kcal Total: -7.40 -10.39 -17.79 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589126_10803934.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -23.860 kcal (2) G-P(sol) polarization free energy of solvation -7.402 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -31.261 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.393 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.795 kcal (6) G-S(sol) free energy of system = (1) + (5) -41.655 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds