Wall clock time and date at job start Sun Mar 7 2021 02:04:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.52999 * 109.47317 * 2 1 4 4 C 1.52992 * 109.47482 * 120.00142 * 2 1 3 5 5 H 1.09002 * 109.47103 * 300.00247 * 4 2 1 6 6 C 1.53002 * 109.47106 * 60.00162 * 4 2 1 7 7 C 1.53000 * 109.47233 * 180.02562 * 6 4 2 8 8 C 1.53001 * 109.46886 * 299.99330 * 7 6 4 9 9 H 1.08992 * 109.47514 * 300.00434 * 8 7 6 10 10 N 1.46500 * 109.47299 * 180.02562 * 8 7 6 11 11 C 1.34777 * 120.00270 * 155.00124 * 10 8 7 12 12 O 1.21721 * 119.99574 * 0.02562 * 11 10 8 13 13 C 1.46570 * 119.99839 * 180.02562 * 11 10 8 14 14 C 1.40854 * 126.57588 * 179.71504 * 13 11 10 15 15 C 1.40098 * 132.86236 * 0.69302 * 14 13 11 16 16 C 1.36455 * 119.24937 * 179.64625 * 15 14 13 17 17 C 1.50693 * 120.29201 * 179.77656 * 16 15 14 18 18 O 1.42900 * 109.47037 * 239.97502 * 17 16 15 19 19 Si 1.86304 * 109.47383 * 119.97558 * 17 16 15 20 20 C 1.40154 * 119.41050 * 359.74722 * 16 15 14 21 21 C 1.35192 * 120.31852 * 359.97438 * 20 16 15 22 22 N 1.36233 * 120.70666 * 0.02562 * 21 20 16 23 23 N 1.40020 * 132.00949 * 179.97438 * 22 21 20 24 24 C 1.30747 * 109.60436 * 180.02562 * 23 22 21 25 25 C 1.53002 * 109.46963 * 60.00501 * 8 7 6 26 26 C 1.52997 * 109.47482 * 179.97438 * 4 2 1 27 27 H 1.09002 * 109.47153 * 299.99641 * 1 2 3 28 28 H 1.09001 * 109.46832 * 179.97438 * 1 2 3 29 29 H 1.09004 * 109.47261 * 59.99813 * 1 2 3 30 30 H 1.09002 * 109.47153 * 240.00359 * 2 1 3 31 31 H 1.09002 * 109.46716 * 60.00091 * 3 2 1 32 32 H 1.09000 * 109.47486 * 180.02562 * 3 2 1 33 33 H 1.09001 * 109.47362 * 300.00732 * 3 2 1 34 34 H 1.09000 * 109.46986 * 300.00235 * 6 4 2 35 35 H 1.09002 * 109.47596 * 60.00070 * 6 4 2 36 36 H 1.08992 * 109.47399 * 59.99834 * 7 6 4 37 37 H 1.09001 * 109.47194 * 180.02562 * 7 6 4 38 38 H 0.97006 * 119.99630 * 335.00962 * 10 8 7 39 39 H 1.07992 * 120.37444 * 359.39547 * 15 14 13 40 40 H 1.09001 * 109.47222 * 359.97335 * 17 16 15 41 41 H 0.96700 * 113.99908 * 299.99806 * 18 17 16 42 42 H 1.48492 * 109.99981 * 58.67648 * 19 17 16 43 43 H 1.48497 * 109.99928 * 179.97438 * 19 17 16 44 44 H 1.07998 * 119.84226 * 180.02562 * 20 16 15 45 45 H 1.08000 * 119.64150 * 180.02562 * 21 20 16 46 46 H 1.07993 * 125.63054 * 179.97438 * 24 23 22 47 47 H 1.09002 * 109.47067 * 59.99659 * 25 8 7 48 48 H 1.09000 * 109.47312 * 179.97438 * 25 8 7 49 49 H 1.09002 * 109.47153 * 300.00216 * 26 4 2 50 50 H 1.09001 * 109.47289 * 60.00300 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7212 1.2491 5 1 1.6767 -0.2074 2.1392 6 6 1.5301 -2.1638 1.2491 7 6 2.0397 -2.8849 2.4986 8 6 3.5697 -2.8849 2.4991 9 1 3.9333 -3.3988 1.6093 10 7 4.0577 -3.5759 3.6951 11 6 5.2796 -4.1445 3.6936 12 8 5.9779 -4.0834 2.6985 13 6 5.7675 -4.8363 4.8901 14 6 7.0115 -5.4800 5.0388 15 6 8.1054 -5.6497 4.1801 16 6 9.2007 -6.3327 4.6226 17 6 10.3884 -6.5334 3.7171 18 8 10.6154 -7.9321 3.5322 19 14 11.8958 -5.7562 4.4883 20 6 9.2115 -6.8453 5.9270 21 6 8.1467 -6.6646 6.7401 22 7 7.0486 -5.9841 6.3075 23 7 5.8381 -5.6633 6.9338 24 6 5.0816 -4.9895 6.1073 25 6 4.0797 -1.4424 2.4991 26 6 3.5700 -0.7218 1.2488 27 1 -0.3633 0.5138 0.8900 28 1 -0.3633 -1.0277 -0.0005 29 1 -0.3634 0.5139 -0.8900 30 1 1.8933 -0.5138 -0.8900 31 1 1.6767 1.9563 0.8900 32 1 3.1300 1.4425 -0.0005 33 1 1.6766 1.9564 -0.8899 34 1 0.4401 -2.1638 1.2491 35 1 1.8934 -2.6776 0.3591 36 1 1.6760 -2.3710 3.3884 37 1 1.6767 -3.9127 2.4983 38 1 3.5012 -3.6243 4.4882 39 1 8.0805 -5.2480 3.1780 40 1 10.1924 -6.0664 2.7519 41 1 10.7968 -8.4127 4.3514 42 1 12.1550 -6.3621 5.8190 43 1 13.0741 -5.9478 3.6052 44 1 10.0749 -7.3866 6.2846 45 1 8.1668 -7.0639 7.7434 46 1 4.0927 -4.6133 6.3238 47 1 3.7160 -0.9285 3.3890 48 1 5.1697 -1.4424 2.4999 49 1 3.9330 -1.2358 0.3588 50 1 3.9338 0.3057 1.2487 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14589126_11618758.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:04:00 Heat of formation + Delta-G solvation = 12.694413 kcal Electronic energy + Delta-G solvation = -30035.146502 eV Core-core repulsion = 26029.587582 eV Total energy + Delta-G solvation = -4005.558919 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.189 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -43.29037 -40.87637 -39.64941 -39.21895 -37.33820 -36.52997 -34.27383 -33.89986 -32.10646 -31.88572 -30.66448 -29.13957 -28.03931 -27.21655 -25.14695 -24.26692 -23.43785 -23.24645 -22.86272 -21.23767 -20.98807 -20.57312 -19.02831 -18.65482 -18.01135 -17.59792 -17.01866 -16.93010 -16.58457 -16.24573 -15.90389 -15.59048 -15.49347 -15.32169 -15.09200 -14.94723 -14.74161 -14.44967 -14.33939 -14.27010 -14.08442 -13.84161 -13.53660 -13.35423 -13.25922 -13.10540 -12.74827 -12.65206 -12.47529 -12.24237 -12.09774 -12.07732 -12.02856 -11.91356 -11.62394 -11.54619 -11.32258 -11.12365 -10.90809 -10.90429 -10.62770 -10.36537 -9.88615 -8.75366 -5.05909 -0.55276 -0.15738 0.99893 1.08308 1.12701 1.47686 1.80485 2.06866 2.31815 2.64695 3.05947 3.14582 3.27839 3.42588 3.63184 3.68876 3.69864 3.80056 3.85132 3.98769 4.03424 4.12366 4.16060 4.25542 4.32717 4.33795 4.37114 4.42336 4.50560 4.55680 4.58088 4.65484 4.68403 4.73583 4.79557 4.82212 4.98465 5.00405 5.05272 5.07345 5.10876 5.16474 5.16570 5.20645 5.22661 5.27103 5.31172 5.38621 5.41316 5.53755 5.61494 5.64013 5.68855 6.21511 6.31825 6.69006 7.46637 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C -0.093 4.093 3 C -0.151 4.151 4 C -0.083 4.083 5 H 0.071 0.929 6 C -0.113 4.113 7 C -0.127 4.127 8 C 0.149 3.851 9 H 0.089 0.911 10 N -0.726 5.726 11 C 0.602 3.398 12 O -0.548 6.548 13 C -0.314 4.314 14 C 0.169 3.831 15 C -0.089 4.089 16 C -0.067 4.067 17 C -0.075 4.075 18 O -0.521 6.521 19 Si 0.696 3.304 20 C -0.162 4.162 21 C 0.123 3.877 22 N -0.267 5.267 23 N -0.314 5.314 24 C 0.120 3.880 25 C -0.128 4.128 26 C -0.114 4.114 27 H 0.053 0.947 28 H 0.057 0.943 29 H 0.053 0.947 30 H 0.069 0.931 31 H 0.053 0.947 32 H 0.058 0.942 33 H 0.053 0.947 34 H 0.071 0.929 35 H 0.065 0.935 36 H 0.068 0.932 37 H 0.068 0.932 38 H 0.396 0.604 39 H 0.165 0.835 40 H 0.126 0.874 41 H 0.375 0.625 42 H -0.253 1.253 43 H -0.247 1.247 44 H 0.156 0.844 45 H 0.177 0.823 46 H 0.198 0.802 47 H 0.062 0.938 48 H 0.068 0.932 49 H 0.064 0.936 50 H 0.068 0.932 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.616 1.646 2.610 3.147 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.208 4.208 2 C -0.111 4.111 3 C -0.208 4.208 4 C -0.102 4.102 5 H 0.089 0.911 6 C -0.151 4.151 7 C -0.165 4.165 8 C 0.045 3.955 9 H 0.107 0.893 10 N -0.377 5.377 11 C 0.390 3.610 12 O -0.427 6.427 13 C -0.329 4.329 14 C 0.048 3.952 15 C -0.109 4.109 16 C -0.072 4.072 17 C -0.184 4.184 18 O -0.327 6.327 19 Si 0.594 3.406 20 C -0.184 4.184 21 C -0.003 4.003 22 N -0.031 5.031 23 N -0.134 5.134 24 C -0.061 4.061 25 C -0.167 4.167 26 C -0.152 4.152 27 H 0.073 0.927 28 H 0.076 0.924 29 H 0.072 0.928 30 H 0.088 0.912 31 H 0.072 0.928 32 H 0.077 0.923 33 H 0.072 0.928 34 H 0.089 0.911 35 H 0.084 0.916 36 H 0.086 0.914 37 H 0.087 0.913 38 H 0.230 0.770 39 H 0.183 0.817 40 H 0.144 0.856 41 H 0.223 0.777 42 H -0.177 1.177 43 H -0.171 1.171 44 H 0.174 0.826 45 H 0.194 0.806 46 H 0.215 0.785 47 H 0.081 0.919 48 H 0.087 0.913 49 H 0.083 0.917 50 H 0.087 0.913 Dipole moment (debyes) X Y Z Total from point charges 0.547 1.243 2.834 3.142 hybrid contribution -0.695 -0.854 0.102 1.106 sum -0.148 0.389 2.936 2.966 Atomic orbital electron populations 1.21910 0.95292 1.01830 1.01745 1.21142 0.95691 0.96214 0.98074 1.21907 1.01258 0.95914 1.01715 1.21250 0.95295 0.95470 0.98171 0.91102 1.21600 1.00802 0.95185 0.97483 1.21814 0.93998 1.01262 0.99383 1.20980 0.93506 0.92602 0.88413 0.89341 1.45800 1.17622 1.57336 1.16911 1.16819 0.81001 0.77211 0.85925 1.90781 1.56422 1.61042 1.34479 1.19663 0.96684 1.18613 0.97943 1.19300 0.95515 0.94892 0.85501 1.20701 0.89482 0.99841 1.00848 1.20407 0.96357 0.95976 0.94505 1.25076 1.02172 0.86991 1.04184 1.86708 1.92385 1.17921 1.35731 0.94406 0.76033 0.90943 0.79203 1.20699 0.99132 1.04728 0.93809 1.21509 0.83408 0.94328 1.01078 1.46074 1.12477 1.34685 1.09866 1.77643 0.90921 1.24644 1.20183 1.24070 0.98973 0.92955 0.90128 1.21927 1.01344 0.94916 0.98491 1.21621 0.94941 1.00692 0.97897 0.92744 0.92391 0.92809 0.91217 0.92754 0.92324 0.92816 0.91082 0.91604 0.91375 0.91281 0.76963 0.81734 0.85581 0.77722 1.17692 1.17131 0.82627 0.80596 0.78508 0.91892 0.91328 0.91693 0.91323 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.14 8.84 37.16 0.33 0.47 16 2 C -0.09 0.08 2.51 -90.63 -0.23 -0.15 16 3 C -0.15 0.10 8.84 37.16 0.33 0.43 16 4 C -0.08 0.09 1.78 -90.62 -0.16 -0.07 16 5 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 6 C -0.11 0.15 4.85 -26.73 -0.13 0.02 16 7 C -0.13 0.20 5.39 -26.73 -0.14 0.06 16 8 C 0.15 0.02 2.45 -67.93 -0.17 -0.14 16 9 H 0.09 0.20 7.57 -51.93 -0.39 -0.19 16 10 N -0.73 -0.06 5.07 -55.15 -0.28 -0.34 16 11 C 0.60 1.86 7.75 -12.90 -0.10 1.76 16 12 O -0.55 -3.38 15.37 5.17 0.08 -3.30 16 13 C -0.31 -0.79 6.17 -104.68 -0.65 -1.43 16 14 C 0.17 0.47 6.76 -84.07 -0.57 -0.10 16 15 C -0.09 -0.14 9.35 -39.53 -0.37 -0.51 16 16 C -0.07 0.04 4.53 -104.55 -0.47 -0.44 16 17 C -0.08 0.09 2.84 36.00 0.10 0.19 16 18 O -0.52 -0.04 12.88 -35.23 -0.45 -0.49 16 19 Si 0.70 -1.49 31.97 -169.99 -5.43 -6.93 16 20 C -0.16 0.32 8.38 -39.95 -0.33 -0.02 16 21 C 0.12 -0.10 11.17 -16.68 -0.19 -0.29 16 22 N -0.27 -0.55 3.86 -10.55 -0.04 -0.60 16 23 N -0.31 -0.83 12.57 30.75 0.39 -0.45 16 24 C 0.12 0.09 11.44 -17.14 -0.20 -0.10 16 25 C -0.13 -0.03 5.50 -26.70 -0.15 -0.18 16 26 C -0.11 0.05 4.85 -26.71 -0.13 -0.08 16 27 H 0.05 -0.05 8.14 -51.93 -0.42 -0.47 16 28 H 0.06 -0.07 6.43 -51.93 -0.33 -0.40 16 29 H 0.05 -0.04 8.14 -51.93 -0.42 -0.46 16 30 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 31 H 0.05 -0.03 8.14 -51.93 -0.42 -0.46 16 32 H 0.06 -0.04 6.43 -51.93 -0.33 -0.37 16 33 H 0.05 -0.03 8.14 -51.93 -0.42 -0.45 16 34 H 0.07 -0.12 6.43 -51.93 -0.33 -0.45 16 35 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 36 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 37 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 38 H 0.40 -1.03 7.52 -40.82 -0.31 -1.34 16 39 H 0.17 0.30 7.01 -52.49 -0.37 -0.07 16 40 H 0.13 -0.20 7.71 -51.93 -0.40 -0.60 16 41 H 0.37 -1.33 8.08 45.56 0.37 -0.96 16 42 H -0.25 0.28 7.05 56.52 0.40 0.68 16 43 H -0.25 -0.27 7.11 56.52 0.40 0.14 16 44 H 0.16 -0.74 7.26 -52.49 -0.38 -1.12 16 45 H 0.18 -0.63 8.06 -52.49 -0.42 -1.05 16 46 H 0.20 -0.68 7.46 -52.49 -0.39 -1.07 16 47 H 0.06 -0.01 8.14 -51.93 -0.42 -0.44 16 48 H 0.07 0.15 8.14 -51.93 -0.42 -0.27 16 49 H 0.06 0.02 8.14 -51.93 -0.42 -0.40 16 50 H 0.07 -0.03 6.43 -51.93 -0.33 -0.36 16 LS Contribution 393.37 15.07 5.93 5.93 Total: 0.00 -8.44 393.37 -10.94 -19.38 By element: Atomic # 1 Polarization: -4.73 SS G_CDS: -7.91 Total: -12.63 kcal Atomic # 6 Polarization: 2.65 SS G_CDS: -3.22 Total: -0.57 kcal Atomic # 7 Polarization: -1.45 SS G_CDS: 0.07 Total: -1.38 kcal Atomic # 8 Polarization: -3.42 SS G_CDS: -0.37 Total: -3.79 kcal Atomic # 14 Polarization: -1.49 SS G_CDS: -5.43 Total: -6.93 kcal Total LS contribution 5.93 Total: 5.93 kcal Total: -8.44 -10.94 -19.38 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589126_11618758.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 32.074 kcal (2) G-P(sol) polarization free energy of solvation -8.440 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 23.634 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.939 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.380 kcal (6) G-S(sol) free energy of system = (1) + (5) 12.694 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds