Wall clock time and date at job start Sun Mar 7 2021 02:04:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.35455 * 125.56416 * 2 1 4 4 C 1.50698 * 126.06560 * 0.03268 * 3 2 1 5 5 O 1.42899 * 109.47174 * 203.17992 * 4 3 2 6 6 Si 1.86304 * 109.47480 * 323.17769 * 4 3 2 7 7 C 1.39830 * 107.86729 * 180.14578 * 3 2 1 8 8 C 1.50703 * 126.46020 * 179.86549 * 7 3 2 9 9 C 1.37872 * 107.08344 * 359.60613 * 7 3 2 10 10 C 1.46677 * 126.23568 * 180.23757 * 9 7 3 11 11 O 1.21698 * 119.99819 * 0.02562 * 10 9 7 12 12 N 1.34781 * 120.00319 * 180.02562 * 10 9 7 13 13 C 1.46496 * 120.00221 * 180.02562 * 12 10 9 14 14 H 1.09004 * 109.46964 * 34.99337 * 13 12 10 15 15 C 1.52994 * 109.47350 * 154.99912 * 13 12 10 16 16 C 1.52997 * 109.47043 * 179.97438 * 15 13 12 17 17 C 1.53004 * 109.47161 * 299.99912 * 16 15 13 18 18 H 1.09004 * 109.46806 * 299.99797 * 17 16 15 19 19 C 1.53000 * 109.47220 * 180.02562 * 17 16 15 20 20 C 1.52999 * 109.47130 * 59.99616 * 19 17 16 21 21 C 1.52995 * 109.47233 * 179.97438 * 19 17 16 22 22 C 1.52994 * 109.47070 * 60.00104 * 17 16 15 23 23 C 1.53000 * 109.47318 * 300.00209 * 22 17 16 24 24 N 1.35534 * 125.56692 * 179.70585 * 2 1 3 25 25 H 1.08993 * 109.47205 * 276.23256 * 1 2 3 26 26 H 1.09003 * 109.47095 * 36.23115 * 1 2 3 27 27 H 1.09001 * 109.46878 * 156.23095 * 1 2 3 28 28 H 1.08997 * 109.47360 * 83.17919 * 4 3 2 29 29 H 0.96697 * 114.00058 * 59.99905 * 5 4 3 30 30 H 1.48497 * 110.00431 * 180.02562 * 6 4 3 31 31 H 1.48502 * 109.99633 * 301.32267 * 6 4 3 32 32 H 1.08995 * 109.46987 * 269.71937 * 8 7 3 33 33 H 1.08994 * 109.46684 * 149.71317 * 8 7 3 34 34 H 1.08994 * 109.46516 * 29.71460 * 8 7 3 35 35 H 0.96997 * 119.99426 * 359.97438 * 12 10 9 36 36 H 1.09001 * 109.47106 * 299.99891 * 15 13 12 37 37 H 1.08997 * 109.47251 * 59.99597 * 15 13 12 38 38 H 1.08997 * 109.47403 * 59.99718 * 16 15 13 39 39 H 1.09007 * 109.47329 * 180.02562 * 16 15 13 40 40 H 1.08998 * 109.46882 * 300.00153 * 19 17 16 41 41 H 1.09005 * 109.47105 * 60.00677 * 20 19 17 42 42 H 1.09004 * 109.47021 * 180.02562 * 20 19 17 43 43 H 1.09001 * 109.47418 * 300.00235 * 20 19 17 44 44 H 1.09004 * 109.47303 * 59.99583 * 21 19 17 45 45 H 1.08995 * 109.47333 * 179.97438 * 21 19 17 46 46 H 1.08998 * 109.47393 * 299.99940 * 21 19 17 47 47 H 1.08997 * 109.47251 * 60.00343 * 22 17 16 48 48 H 1.09001 * 109.47106 * 180.02562 * 22 17 16 49 49 H 1.09004 * 109.46761 * 300.00431 * 23 22 17 50 50 H 1.08998 * 109.47580 * 180.02562 * 23 22 17 51 51 H 0.97004 * 125.67398 * 0.02562 * 24 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2948 1.1019 0.0000 4 6 1.8199 2.5321 0.0007 5 8 2.8449 3.3746 -0.5298 6 14 0.2893 2.6788 -1.0512 7 6 3.6270 0.6768 -0.0034 8 6 4.8486 1.5593 -0.0075 9 6 3.6122 -0.7018 0.0037 10 6 4.7860 -1.5814 0.0081 11 8 5.9049 -1.1029 0.0062 12 7 4.6254 -2.9196 0.0145 13 6 5.7977 -3.7981 0.0195 14 1 6.5929 -3.3394 0.6072 15 6 5.4215 -5.1471 0.6354 16 6 6.6457 -6.0648 0.6400 17 6 7.1296 -6.2768 -0.7959 18 1 6.3340 -6.7353 -1.3834 19 6 8.3534 -7.1950 -0.7913 20 6 7.9767 -8.5440 -0.1756 21 6 8.8369 -7.4076 -2.2272 22 6 7.5058 -4.9278 -1.4118 23 6 6.2816 -4.0101 -1.4164 24 7 2.2953 -1.1025 0.0057 25 1 -0.3633 0.1116 1.0215 26 1 -0.3633 0.8290 -0.6074 27 1 -0.3633 -0.9405 -0.4142 28 1 1.5900 2.8381 1.0213 29 1 3.1006 3.1593 -1.4372 30 1 -0.1888 4.0847 -1.0593 31 1 0.5814 2.2342 -2.4377 32 1 5.1432 1.7672 -1.0360 33 1 5.6641 1.0531 0.5089 34 1 4.6218 2.4959 0.5019 35 1 3.7335 -3.3009 0.0164 36 1 5.0763 -4.9960 1.6582 37 1 4.6263 -5.6057 0.0477 38 1 7.4412 -5.6064 1.2275 39 1 6.3776 -7.0261 1.0784 40 1 9.1490 -6.7370 -0.2037 41 1 7.1810 -9.0021 -0.7633 42 1 8.8487 -9.1980 -0.1719 43 1 7.6319 -8.3929 0.8474 44 1 9.1052 -6.4466 -2.6663 45 1 9.7090 -8.0613 -2.2240 46 1 8.0412 -7.8658 -2.8145 47 1 8.3013 -4.4694 -0.8243 48 1 7.8501 -5.0788 -2.4349 49 1 5.4861 -4.4685 -2.0039 50 1 6.5495 -3.0491 -1.8556 51 1 1.9834 -2.0210 0.0100 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14589126_12297754.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:04:04 Heat of formation + Delta-G solvation = -55.618381 kcal Electronic energy + Delta-G solvation = -28103.003974 eV Core-core repulsion = 24389.049503 eV Total energy + Delta-G solvation = -3713.954471 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 321.209 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -42.66494 -40.89776 -39.50322 -37.80269 -36.70296 -34.30437 -33.63597 -32.97090 -31.99652 -29.77519 -29.31517 -28.10207 -27.20990 -26.24568 -23.99099 -23.54894 -22.22393 -21.35362 -20.82327 -20.61181 -20.24130 -19.25861 -17.73185 -17.21958 -16.75725 -16.54641 -16.32993 -15.83938 -15.63509 -15.37215 -15.27939 -15.08519 -14.77470 -14.57323 -14.47331 -14.32235 -14.25485 -14.15187 -13.82615 -13.54398 -13.45318 -13.24282 -13.16748 -13.15410 -12.84211 -12.72350 -12.45237 -12.33317 -12.29910 -12.17543 -12.12578 -11.77080 -11.69735 -11.40676 -11.24647 -11.02571 -10.89130 -10.49514 -10.09246 -9.43256 -8.98425 -4.76036 0.43446 1.23014 1.66782 1.71422 1.94453 2.06385 2.14146 2.43096 3.45200 3.56303 3.59633 3.63534 3.68270 3.83896 3.92838 3.96292 4.01191 4.06141 4.22123 4.24732 4.29721 4.31843 4.42126 4.44078 4.47027 4.56301 4.59705 4.64551 4.69243 4.72267 4.73494 4.75001 4.89454 4.93543 4.95210 4.97194 5.01361 5.07048 5.10661 5.13002 5.13532 5.21196 5.29784 5.31183 5.40108 5.42072 5.46589 5.52666 5.54890 5.74640 5.96153 6.28786 6.48936 6.59438 7.21650 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.085 4.085 2 C 0.061 3.939 3 C -0.207 4.207 4 C -0.030 4.030 5 O -0.529 6.529 6 Si 0.639 3.361 7 C -0.045 4.045 8 C -0.094 4.094 9 C -0.064 4.064 10 C 0.591 3.409 11 O -0.521 6.521 12 N -0.731 5.731 13 C 0.148 3.852 14 H 0.091 0.909 15 C -0.126 4.126 16 C -0.113 4.113 17 C -0.083 4.083 18 H 0.070 0.930 19 C -0.093 4.093 20 C -0.151 4.151 21 C -0.151 4.151 22 C -0.114 4.114 23 C -0.128 4.128 24 N -0.535 5.535 25 H 0.096 0.904 26 H 0.088 0.912 27 H 0.081 0.919 28 H 0.113 0.887 29 H 0.374 0.626 30 H -0.253 1.253 31 H -0.261 1.261 32 H 0.064 0.936 33 H 0.076 0.924 34 H 0.078 0.922 35 H 0.392 0.608 36 H 0.069 0.931 37 H 0.067 0.933 38 H 0.066 0.934 39 H 0.072 0.928 40 H 0.070 0.930 41 H 0.053 0.947 42 H 0.054 0.946 43 H 0.057 0.943 44 H 0.058 0.942 45 H 0.054 0.946 46 H 0.053 0.947 47 H 0.065 0.935 48 H 0.069 0.931 49 H 0.062 0.938 50 H 0.068 0.932 51 H 0.415 0.585 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.432 -5.739 0.620 7.927 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.140 4.140 2 C -0.057 4.057 3 C -0.214 4.214 4 C -0.141 4.141 5 O -0.334 6.334 6 Si 0.540 3.460 7 C -0.053 4.053 8 C -0.151 4.151 9 C -0.176 4.176 10 C 0.379 3.621 11 O -0.397 6.397 12 N -0.382 5.382 13 C 0.044 3.956 14 H 0.109 0.891 15 C -0.164 4.164 16 C -0.151 4.151 17 C -0.102 4.102 18 H 0.089 0.911 19 C -0.111 4.111 20 C -0.208 4.208 21 C -0.208 4.208 22 C -0.152 4.152 23 C -0.167 4.167 24 N -0.132 5.132 25 H 0.114 0.886 26 H 0.105 0.895 27 H 0.100 0.900 28 H 0.131 0.869 29 H 0.222 0.778 30 H -0.178 1.178 31 H -0.185 1.185 32 H 0.082 0.918 33 H 0.095 0.905 34 H 0.097 0.903 35 H 0.225 0.775 36 H 0.087 0.913 37 H 0.085 0.915 38 H 0.085 0.915 39 H 0.090 0.910 40 H 0.088 0.912 41 H 0.073 0.927 42 H 0.073 0.927 43 H 0.076 0.924 44 H 0.077 0.923 45 H 0.073 0.927 46 H 0.072 0.928 47 H 0.084 0.916 48 H 0.088 0.912 49 H 0.080 0.920 50 H 0.087 0.913 51 H 0.253 0.747 Dipole moment (debyes) X Y Z Total from point charges -5.008 -4.937 0.511 7.051 hybrid contribution 0.402 -0.601 -0.691 1.001 sum -4.606 -5.538 -0.180 7.205 Atomic orbital electron populations 1.20535 0.87485 1.02098 1.03903 1.20131 0.93444 0.85791 1.06331 1.19603 0.92958 0.94890 1.13928 1.24188 0.98736 0.86368 1.04814 1.86549 1.56005 1.57451 1.33439 0.95455 0.84746 0.84157 0.81647 1.19788 0.94832 0.90735 0.99978 1.20452 0.93895 0.98424 1.02283 1.20144 0.82769 0.94135 1.20513 1.17014 0.87536 0.81284 0.76233 1.90843 1.24124 1.74907 1.49813 1.45989 1.09738 1.05805 1.76632 1.21036 0.87922 0.89573 0.97095 0.89113 1.21811 0.99039 0.94426 1.01121 1.21601 0.97068 0.99407 0.96993 1.21252 0.97485 0.95327 0.96119 0.91133 1.21141 0.97344 0.95721 0.96909 1.21911 1.01459 0.96625 1.00782 1.21906 1.01051 1.01756 0.96098 1.21613 0.97448 0.94585 1.01523 1.21916 0.98202 1.00356 0.96213 1.41748 1.05324 1.08181 1.57942 0.88578 0.89500 0.90014 0.86899 0.77841 1.17824 1.18530 0.91757 0.90524 0.90346 0.77534 0.91278 0.91475 0.91503 0.90963 0.91161 0.92750 0.92731 0.92398 0.92337 0.92733 0.92756 0.91596 0.91210 0.91962 0.91318 0.74694 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 0.41 9.44 36.01 0.34 0.75 16 2 C 0.06 -0.07 6.81 -81.95 -0.56 -0.63 16 3 C -0.21 -0.26 5.30 -105.02 -0.56 -0.81 16 4 C -0.03 -0.02 3.05 36.00 0.11 0.09 16 5 O -0.53 -1.22 10.26 -35.23 -0.36 -1.58 16 6 Si 0.64 -0.22 27.78 -169.99 -4.72 -4.95 16 7 C -0.04 -0.14 6.16 -104.16 -0.64 -0.78 16 8 C -0.09 -0.33 8.62 36.01 0.31 -0.02 16 9 C -0.06 -0.13 7.06 -81.98 -0.58 -0.71 16 10 C 0.59 1.70 7.75 -12.85 -0.10 1.60 16 11 O -0.52 -3.34 14.46 5.19 0.08 -3.26 16 12 N -0.73 0.32 5.07 -55.12 -0.28 0.04 16 13 C 0.15 -0.03 2.45 -67.93 -0.17 -0.19 16 14 H 0.09 0.18 7.58 -51.93 -0.39 -0.21 16 15 C -0.13 0.26 5.39 -26.74 -0.14 0.11 16 16 C -0.11 0.19 4.85 -26.73 -0.13 0.06 16 17 C -0.08 0.11 1.77 -90.62 -0.16 -0.05 16 18 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 19 C -0.09 0.10 2.51 -90.62 -0.23 -0.13 16 20 C -0.15 0.18 8.84 37.16 0.33 0.51 16 21 C -0.15 0.12 8.84 37.15 0.33 0.45 16 22 C -0.11 0.06 4.85 -26.73 -0.13 -0.07 16 23 C -0.13 -0.01 5.49 -26.73 -0.15 -0.16 16 24 N -0.53 0.79 5.99 -5.69 -0.03 0.76 16 25 H 0.10 -0.61 8.14 -51.93 -0.42 -1.03 16 26 H 0.09 -0.43 2.78 -51.93 -0.14 -0.57 16 27 H 0.08 -0.53 8.14 -51.93 -0.42 -0.95 16 28 H 0.11 0.01 7.96 -51.93 -0.41 -0.40 16 29 H 0.37 0.08 8.56 45.56 0.39 0.47 16 30 H -0.25 -0.76 7.11 56.52 0.40 -0.36 16 31 H -0.26 -0.63 7.11 56.52 0.40 -0.23 16 32 H 0.06 0.20 8.14 -51.93 -0.42 -0.23 16 33 H 0.08 0.39 6.48 -51.93 -0.34 0.06 16 34 H 0.08 0.28 6.76 -51.93 -0.35 -0.07 16 35 H 0.39 -1.30 7.73 -40.82 -0.32 -1.61 16 36 H 0.07 -0.14 8.14 -51.93 -0.42 -0.57 16 37 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 38 H 0.07 -0.07 8.14 -51.93 -0.42 -0.50 16 39 H 0.07 -0.15 6.43 -51.93 -0.33 -0.48 16 40 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 41 H 0.05 -0.06 8.14 -51.93 -0.42 -0.48 16 42 H 0.05 -0.05 8.14 -51.93 -0.42 -0.47 16 43 H 0.06 -0.09 6.43 -51.93 -0.33 -0.42 16 44 H 0.06 -0.04 6.43 -51.93 -0.33 -0.38 16 45 H 0.05 -0.04 8.14 -51.93 -0.42 -0.46 16 46 H 0.05 -0.04 8.14 -51.93 -0.42 -0.46 16 47 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 48 H 0.07 -0.03 6.43 -51.93 -0.33 -0.37 16 49 H 0.06 -0.02 8.14 -51.93 -0.42 -0.45 16 50 H 0.07 0.16 8.14 -51.93 -0.42 -0.27 16 51 H 0.42 -2.02 8.19 -40.82 -0.33 -2.35 16 LS Contribution 380.87 15.07 5.74 5.74 Total: 0.00 -7.53 380.87 -10.48 -18.01 By element: Atomic # 1 Polarization: -6.01 SS G_CDS: -8.77 Total: -14.79 kcal Atomic # 6 Polarization: 2.15 SS G_CDS: -2.12 Total: 0.02 kcal Atomic # 7 Polarization: 1.11 SS G_CDS: -0.31 Total: 0.80 kcal Atomic # 8 Polarization: -4.55 SS G_CDS: -0.29 Total: -4.84 kcal Atomic # 14 Polarization: -0.22 SS G_CDS: -4.72 Total: -4.95 kcal Total LS contribution 5.74 Total: 5.74 kcal Total: -7.53 -10.48 -18.01 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589126_12297754.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -37.609 kcal (2) G-P(sol) polarization free energy of solvation -7.531 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -45.140 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.479 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.010 kcal (6) G-S(sol) free energy of system = (1) + (5) -55.618 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds