Wall clock time and date at job start Sun Mar 7 2021 02:04:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 C 1.53002 * 109.46969 * 2 1 4 4 C 1.52997 * 109.47131 * 119.99938 * 2 1 3 5 5 H 1.08993 * 109.47194 * 299.99846 * 4 2 1 6 6 C 1.52999 * 109.46991 * 60.00689 * 4 2 1 7 7 C 1.52997 * 109.46991 * 180.02562 * 6 4 2 8 8 C 1.52996 * 109.47131 * 299.99311 * 7 6 4 9 9 H 1.08996 * 109.47452 * 300.00000 * 8 7 6 10 10 N 1.46507 * 109.47258 * 179.97438 * 8 7 6 11 11 C 1.34778 * 119.99609 * 85.00044 * 10 8 7 12 12 O 1.21565 * 120.00118 * 0.02562 * 11 10 8 13 13 C 1.47690 * 119.99891 * 180.02562 * 11 10 8 14 14 C 1.39820 * 120.16709 * 180.02562 * 13 11 10 15 15 F 1.35100 * 120.10925 * 0.02562 * 14 13 11 16 16 C 1.38325 * 119.77882 * 180.02562 * 14 13 11 17 17 C 1.38207 * 120.11750 * 359.97438 * 16 14 13 18 18 C 1.38455 * 120.33812 * 0.02562 * 17 16 14 19 19 C 1.50699 * 119.88986 * 180.02562 * 18 17 16 20 20 O 1.42901 * 109.47299 * 245.00362 * 19 18 17 21 21 Si 1.86305 * 109.47018 * 4.99855 * 19 18 17 22 22 C 1.37858 * 120.22186 * 359.72521 * 18 17 16 23 23 C 1.53002 * 109.46972 * 60.00459 * 8 7 6 24 24 C 1.52997 * 109.46817 * 299.99733 * 23 8 7 25 25 H 1.08992 * 109.47534 * 299.99582 * 1 2 3 26 26 H 1.08996 * 109.47134 * 60.00388 * 1 2 3 27 27 H 1.09001 * 109.46997 * 179.97438 * 1 2 3 28 28 H 1.09004 * 109.47298 * 240.00221 * 2 1 3 29 29 H 1.09004 * 109.46930 * 59.99996 * 3 2 1 30 30 H 1.09002 * 109.47067 * 179.97438 * 3 2 1 31 31 H 1.09000 * 109.47312 * 299.99939 * 3 2 1 32 32 H 1.09002 * 109.46719 * 299.99711 * 6 4 2 33 33 H 1.08993 * 109.47839 * 59.99553 * 6 4 2 34 34 H 1.09001 * 109.47289 * 179.97438 * 7 6 4 35 35 H 1.09000 * 109.47611 * 59.99933 * 7 6 4 36 36 H 0.97001 * 120.00071 * 265.00501 * 10 8 7 37 37 H 1.08001 * 119.94219 * 179.97438 * 16 14 13 38 38 H 1.07998 * 119.82942 * 180.02562 * 17 16 14 39 39 H 1.09001 * 109.47191 * 125.00006 * 19 18 17 40 40 H 0.96701 * 114.00548 * 180.02562 * 20 19 18 41 41 H 1.48503 * 109.99981 * 178.67781 * 21 19 18 42 42 H 1.48495 * 110.00251 * 300.00191 * 21 19 18 43 43 H 1.08000 * 120.06524 * 180.28060 * 22 18 17 44 44 H 1.09002 * 109.47070 * 179.97438 * 23 8 7 45 45 H 1.08996 * 109.47407 * 59.99513 * 23 8 7 46 46 H 1.09001 * 109.47502 * 300.00518 * 24 23 8 47 47 H 1.09001 * 109.47289 * 180.02562 * 24 23 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 6 2.0400 -0.7212 1.2492 5 1 1.6767 -0.2074 2.1392 6 6 1.5301 -2.1638 1.2491 7 6 2.0396 -2.8848 2.4987 8 6 3.5695 -2.8848 2.4993 9 1 3.9333 -3.3987 1.6096 10 7 4.0574 -3.5747 3.6962 11 6 4.1861 -4.9163 3.6951 12 8 3.8978 -5.5539 2.7010 13 6 4.6774 -5.6119 4.9018 14 6 4.8128 -7.0035 4.9044 15 9 4.4950 -7.7175 3.8024 16 6 5.2732 -7.6468 6.0392 17 6 5.5988 -6.9165 7.1664 18 6 5.4666 -5.5383 7.1692 19 6 5.8251 -4.7519 8.4037 20 8 4.6508 -4.1313 8.9309 21 14 6.5486 -5.8982 9.6818 22 6 5.0139 -4.8824 6.0443 23 6 4.0795 -1.4423 2.4994 24 6 3.5700 -0.7212 1.2499 25 1 -0.3634 0.5137 0.8899 26 1 -0.3633 0.5137 -0.8900 27 1 -0.3633 -1.0277 -0.0005 28 1 1.8933 -0.5138 -0.8900 29 1 1.6766 1.9563 0.8900 30 1 3.1299 1.4426 0.0005 31 1 1.6766 1.9564 -0.8900 32 1 0.4401 -2.1638 1.2491 33 1 1.8934 -2.6776 0.3592 34 1 1.6760 -3.9124 2.4989 35 1 1.6758 -2.3709 3.3885 36 1 4.2877 -3.0659 4.4893 37 1 5.3784 -8.7217 6.0443 38 1 5.9582 -7.4235 8.0497 39 1 6.5568 -3.9860 8.1468 40 1 4.8072 -3.6068 9.7282 41 1 6.9358 -5.1298 10.8922 42 1 5.5607 -6.9473 10.0406 43 1 4.9161 -3.8069 6.0477 44 1 5.1695 -1.4422 2.5003 45 1 3.7157 -0.9283 3.3891 46 1 3.9337 -1.2352 0.3601 47 1 3.9337 0.3063 1.2496 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14589126_12335834.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:04:13 Heat of formation + Delta-G solvation = -106.517819 kcal Electronic energy + Delta-G solvation = -27618.030070 eV Core-core repulsion = 23680.689466 eV Total energy + Delta-G solvation = -3937.340603 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 322.173 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -49.79496 -41.41191 -40.39367 -39.42254 -37.73567 -36.63782 -34.29762 -32.68795 -32.38631 -31.94525 -29.39458 -28.06696 -26.69788 -25.55916 -24.02176 -23.50226 -22.70036 -21.43403 -21.09426 -20.62786 -19.09327 -18.74450 -18.18861 -17.85341 -17.04592 -16.73176 -16.48946 -16.24371 -15.82419 -15.69038 -15.58452 -15.30017 -15.16371 -14.76905 -14.50711 -14.46138 -14.32680 -14.19459 -14.14056 -13.83639 -13.42528 -13.32207 -13.12883 -12.81051 -12.76525 -12.68476 -12.51256 -12.29289 -12.12822 -12.07607 -11.87517 -11.65187 -11.36201 -11.20780 -10.98265 -10.83876 -10.63335 -10.34845 -10.00393 -9.78671 -5.11279 -0.45163 -0.05101 1.09621 1.44991 1.71205 1.81346 2.04638 2.51391 3.06734 3.09811 3.40685 3.49962 3.60681 3.64472 3.66414 3.76465 3.94378 3.97837 4.04516 4.10032 4.16405 4.27143 4.29237 4.36916 4.47786 4.49681 4.52188 4.60795 4.64180 4.69513 4.76927 4.77364 4.81401 4.90090 4.94268 4.97402 5.00945 5.06028 5.10607 5.12609 5.15866 5.18095 5.25766 5.34427 5.35767 5.48797 5.52512 5.57884 5.59891 6.25264 6.45026 7.20637 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C -0.093 4.093 3 C -0.150 4.150 4 C -0.084 4.084 5 H 0.071 0.929 6 C -0.113 4.113 7 C -0.129 4.129 8 C 0.146 3.854 9 H 0.091 0.909 10 N -0.722 5.722 11 C 0.560 3.440 12 O -0.520 6.520 13 C -0.175 4.175 14 C 0.167 3.833 15 F -0.111 7.111 16 C -0.156 4.156 17 C -0.059 4.059 18 C -0.093 4.093 19 C -0.075 4.075 20 O -0.536 6.536 21 Si 0.683 3.317 22 C -0.030 4.030 23 C -0.126 4.126 24 C -0.113 4.113 25 H 0.053 0.947 26 H 0.053 0.947 27 H 0.058 0.942 28 H 0.070 0.930 29 H 0.053 0.947 30 H 0.057 0.943 31 H 0.053 0.947 32 H 0.069 0.931 33 H 0.065 0.935 34 H 0.068 0.932 35 H 0.063 0.937 36 H 0.399 0.601 37 H 0.150 0.850 38 H 0.142 0.858 39 H 0.081 0.919 40 H 0.383 0.617 41 H -0.258 1.258 42 H -0.252 1.252 43 H 0.137 0.863 44 H 0.069 0.931 45 H 0.068 0.932 46 H 0.066 0.934 47 H 0.072 0.928 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.819 3.502 3.875 6.470 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.208 4.208 2 C -0.111 4.111 3 C -0.208 4.208 4 C -0.102 4.102 5 H 0.089 0.911 6 C -0.151 4.151 7 C -0.168 4.168 8 C 0.042 3.958 9 H 0.109 0.891 10 N -0.374 5.374 11 C 0.346 3.654 12 O -0.396 6.396 13 C -0.179 4.179 14 C 0.146 3.854 15 F -0.089 7.089 16 C -0.175 4.175 17 C -0.077 4.077 18 C -0.094 4.094 19 C -0.184 4.184 20 O -0.343 6.343 21 Si 0.584 3.416 22 C -0.049 4.049 23 C -0.164 4.164 24 C -0.150 4.150 25 H 0.073 0.927 26 H 0.072 0.928 27 H 0.077 0.923 28 H 0.088 0.912 29 H 0.073 0.927 30 H 0.076 0.924 31 H 0.072 0.928 32 H 0.088 0.912 33 H 0.084 0.916 34 H 0.086 0.914 35 H 0.082 0.918 36 H 0.234 0.766 37 H 0.168 0.832 38 H 0.159 0.841 39 H 0.099 0.901 40 H 0.231 0.769 41 H -0.183 1.183 42 H -0.177 1.177 43 H 0.155 0.845 44 H 0.088 0.912 45 H 0.087 0.913 46 H 0.085 0.915 47 H 0.090 0.910 Dipole moment (debyes) X Y Z Total from point charges 3.251 2.394 3.389 5.271 hybrid contribution -0.616 1.090 0.778 1.474 sum 2.636 3.484 4.167 6.037 Atomic orbital electron populations 1.21906 0.95230 1.01933 1.01745 1.21141 0.95805 0.96140 0.98018 1.21910 1.01145 0.95935 1.01776 1.21256 0.94988 0.95723 0.98258 0.91079 1.21611 1.00866 0.94878 0.97787 1.21922 0.94791 1.01359 0.98715 1.21061 0.94072 0.92442 0.88178 0.89141 1.45979 1.67733 1.06519 1.17179 1.17961 0.78012 0.82336 0.87058 1.90865 1.49098 1.65703 1.33929 1.20073 1.08607 0.92838 0.96376 1.17743 0.95735 0.88170 0.83760 1.91628 1.89243 1.77332 1.50669 1.21142 1.02738 1.01785 0.91825 1.21072 0.95886 0.92873 0.97840 1.19185 1.02419 0.93308 0.94467 1.24761 0.91481 1.02411 0.99789 1.86585 1.32010 1.68761 1.46979 0.95029 0.86798 0.80791 0.78998 1.20997 0.93563 0.99998 0.90350 1.21814 1.00969 0.94101 0.99530 1.21599 0.95376 1.00673 0.97395 0.92746 0.92763 0.92335 0.91181 0.92748 0.92387 0.92758 0.91214 0.91625 0.91356 0.91791 0.76616 0.83177 0.84072 0.90122 0.76899 1.18316 1.17688 0.84529 0.91183 0.91342 0.91535 0.90958 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.07 8.84 37.16 0.33 0.40 16 2 C -0.09 0.06 2.51 -90.62 -0.23 -0.16 16 3 C -0.15 0.14 8.84 37.16 0.33 0.47 16 4 C -0.08 0.08 1.77 -90.62 -0.16 -0.08 16 5 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 6 C -0.11 0.00 4.85 -26.73 -0.13 -0.13 16 7 C -0.13 -0.11 5.49 -26.73 -0.15 -0.25 16 8 C 0.15 0.08 2.45 -67.93 -0.17 -0.09 16 9 H 0.09 0.23 7.58 -51.93 -0.39 -0.16 16 10 N -0.72 -0.37 5.03 -54.80 -0.28 -0.64 16 11 C 0.56 2.05 7.73 -12.40 -0.10 1.96 16 12 O -0.52 -3.96 15.00 5.31 0.08 -3.88 16 13 C -0.17 -0.38 5.88 -104.91 -0.62 -1.00 16 14 C 0.17 0.47 7.29 -38.96 -0.28 0.19 16 15 F -0.11 -0.60 15.55 2.25 0.04 -0.57 16 16 C -0.16 0.00 10.01 -39.56 -0.40 -0.40 16 17 C -0.06 0.06 8.66 -39.51 -0.34 -0.28 16 18 C -0.09 0.06 5.38 -104.68 -0.56 -0.50 16 19 C -0.07 0.17 2.79 36.01 0.10 0.27 16 20 O -0.54 0.52 12.81 -35.23 -0.45 0.07 16 21 Si 0.68 -1.85 29.84 -169.99 -5.07 -6.93 16 22 C -0.03 0.01 9.17 -39.19 -0.36 -0.35 16 23 C -0.13 0.19 5.39 -26.73 -0.14 0.05 16 24 C -0.11 0.15 4.85 -26.73 -0.13 0.02 16 25 H 0.05 -0.02 8.14 -51.93 -0.42 -0.44 16 26 H 0.05 -0.02 8.14 -51.93 -0.42 -0.44 16 27 H 0.06 -0.02 6.43 -51.93 -0.33 -0.36 16 28 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 29 H 0.05 -0.04 8.14 -51.93 -0.42 -0.47 16 30 H 0.06 -0.07 6.43 -51.93 -0.33 -0.40 16 31 H 0.05 -0.04 8.14 -51.93 -0.42 -0.46 16 32 H 0.07 0.00 6.43 -51.93 -0.33 -0.33 16 33 H 0.07 0.05 8.14 -51.93 -0.42 -0.38 16 34 H 0.07 0.21 8.14 -51.93 -0.42 -0.21 16 35 H 0.06 0.02 8.14 -51.93 -0.42 -0.40 16 36 H 0.40 -0.84 6.63 -40.82 -0.27 -1.11 16 37 H 0.15 -0.32 8.06 -52.49 -0.42 -0.74 16 38 H 0.14 -0.45 4.84 -52.49 -0.25 -0.71 16 39 H 0.08 -0.34 7.96 -51.93 -0.41 -0.75 16 40 H 0.38 -1.81 8.74 45.56 0.40 -1.41 16 41 H -0.26 0.12 7.11 56.52 0.40 0.52 16 42 H -0.25 -0.09 7.04 56.52 0.40 0.31 16 43 H 0.14 -0.34 6.41 -52.49 -0.34 -0.68 16 44 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 45 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 46 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 47 H 0.07 -0.13 6.43 -51.93 -0.33 -0.46 16 LS Contribution 367.94 15.07 5.54 5.54 Total: 0.00 -7.44 367.94 -10.45 -17.89 By element: Atomic # 1 Polarization: -4.28 SS G_CDS: -7.30 Total: -11.58 kcal Atomic # 6 Polarization: 3.10 SS G_CDS: -3.00 Total: 0.10 kcal Atomic # 7 Polarization: -0.37 SS G_CDS: -0.28 Total: -0.64 kcal Atomic # 8 Polarization: -3.44 SS G_CDS: -0.37 Total: -3.81 kcal Atomic # 9 Polarization: -0.60 SS G_CDS: 0.04 Total: -0.57 kcal Atomic # 14 Polarization: -1.85 SS G_CDS: -5.07 Total: -6.93 kcal Total LS contribution 5.54 Total: 5.54 kcal Total: -7.44 -10.45 -17.89 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589126_12335834.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -88.627 kcal (2) G-P(sol) polarization free energy of solvation -7.444 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -96.071 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.447 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.891 kcal (6) G-S(sol) free energy of system = (1) + (5) -106.518 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds