Wall clock time and date at job start Sun Mar 7 2021 02:04:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.52997 * 109.47232 * 2 1 4 4 C 1.53002 * 109.47143 * 120.00043 * 2 1 3 5 5 H 1.09002 * 109.47067 * 300.00018 * 4 2 1 6 6 C 1.53005 * 109.46982 * 59.99669 * 4 2 1 7 7 C 1.52999 * 109.47159 * 179.97438 * 6 4 2 8 8 C 1.52997 * 109.47317 * 300.00546 * 7 6 4 9 9 H 1.09002 * 109.47153 * 299.99641 * 8 7 6 10 10 N 1.46500 * 109.47007 * 179.97438 * 8 7 6 11 11 C 1.34779 * 119.99793 * 154.99772 * 10 8 7 12 12 O 1.21549 * 120.00209 * 0.02562 * 11 10 8 13 13 C 1.47854 * 119.99760 * 179.97438 * 11 10 8 14 14 C 1.39541 * 120.13935 * 0.02562 * 13 11 10 15 15 C 1.38072 * 119.84418 * 179.97438 * 14 13 11 16 16 Br 1.89097 * 119.94045 * 179.97438 * 15 14 13 17 17 C 1.38429 * 120.12125 * 359.97438 * 15 14 13 18 18 C 1.38358 * 120.28175 * 0.02562 * 17 15 14 19 19 C 1.50708 * 119.92243 * 180.02562 * 18 17 15 20 20 O 1.42896 * 109.46854 * 244.99980 * 19 18 17 21 21 Si 1.86302 * 109.46760 * 4.99871 * 19 18 17 22 22 C 1.37943 * 120.15802 * 359.73921 * 18 17 15 23 23 C 1.53000 * 109.47060 * 59.99960 * 8 7 6 24 24 C 1.52997 * 109.47143 * 179.97438 * 4 2 1 25 25 H 1.09002 * 109.47153 * 299.99992 * 1 2 3 26 26 H 1.09001 * 109.46832 * 59.99801 * 1 2 3 27 27 H 1.09000 * 109.47611 * 179.97438 * 1 2 3 28 28 H 1.09002 * 109.47153 * 240.00008 * 2 1 3 29 29 H 1.09000 * 109.47140 * 179.97438 * 3 2 1 30 30 H 1.08998 * 109.47624 * 300.00318 * 3 2 1 31 31 H 1.09002 * 109.47045 * 59.99942 * 3 2 1 32 32 H 1.09002 * 109.46935 * 60.00267 * 6 4 2 33 33 H 1.09000 * 109.47360 * 300.00293 * 6 4 2 34 34 H 1.08996 * 109.46929 * 179.97438 * 7 6 4 35 35 H 1.09002 * 109.46716 * 60.00455 * 7 6 4 36 36 H 0.97004 * 120.00223 * 334.99863 * 10 8 7 37 37 H 1.08007 * 120.07924 * 0.02562 * 14 13 11 38 38 H 1.07996 * 119.85602 * 179.97438 * 17 15 14 39 39 H 1.09000 * 109.46735 * 124.99839 * 19 18 17 40 40 H 0.96704 * 113.99541 * 179.97438 * 20 19 18 41 41 H 1.48502 * 109.99728 * 178.68285 * 21 19 18 42 42 H 1.48504 * 109.99887 * 299.99862 * 21 19 18 43 43 H 1.08007 * 120.06816 * 180.27521 * 22 18 17 44 44 H 1.08992 * 109.47399 * 59.99823 * 23 8 7 45 45 H 1.09004 * 109.46724 * 180.02562 * 23 8 7 46 46 H 1.09002 * 109.46695 * 299.99691 * 24 4 2 47 47 H 1.08993 * 109.47194 * 59.99677 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7213 1.2493 5 1 1.6766 -0.2074 2.1392 6 6 1.5299 -2.1638 1.2493 7 6 2.0404 -2.8853 2.4981 8 6 3.5704 -2.8853 2.4976 9 1 3.9334 -3.3990 1.6074 10 7 4.0591 -3.5756 3.6937 11 6 5.2811 -4.1442 3.6916 12 8 5.9778 -4.0838 2.6974 13 6 5.7746 -4.8404 4.8990 14 6 4.9774 -4.9109 6.0421 15 6 5.4441 -5.5630 7.1661 16 35 4.3664 -5.6597 8.7169 17 6 6.6995 -6.1463 7.1598 18 6 7.4942 -6.0794 6.0292 19 6 8.8594 -6.7177 6.0311 20 8 9.8588 -5.7049 5.8989 21 14 9.1135 -7.6356 7.6323 22 6 7.0375 -5.4350 4.8983 23 6 4.0804 -1.4428 2.4977 24 6 3.5700 -0.7218 1.2489 25 1 -0.3633 0.5138 0.8900 26 1 -0.3633 0.5139 -0.8900 27 1 -0.3634 -1.0276 -0.0005 28 1 1.8933 -0.5138 -0.8900 29 1 3.1300 1.4424 0.0005 30 1 1.6767 1.9564 -0.8899 31 1 1.6766 1.9563 0.8900 32 1 1.8932 -2.6776 0.3593 33 1 0.4399 -2.1638 1.2492 34 1 1.6766 -3.9127 2.4983 35 1 1.6774 -2.3715 3.3883 36 1 3.5033 -3.6234 4.4873 37 1 3.9973 -4.4572 6.0474 38 1 7.0604 -6.6549 8.0415 39 1 8.9357 -7.4147 5.1966 40 1 10.7643 -6.0444 5.8929 41 1 10.4436 -8.2960 7.6335 42 1 9.0118 -6.6962 8.7779 43 1 7.6573 -5.3875 4.0150 44 1 3.7174 -0.9291 3.3878 45 1 5.1704 -1.4428 2.4968 46 1 3.9328 -1.2360 0.3589 47 1 3.9337 0.3056 1.2486 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14589126_12335870.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:04:48 Heat of formation + Delta-G solvation = -60.869580 kcal Electronic energy + Delta-G solvation = -26891.663626 eV Core-core repulsion = 23085.938451 eV Total energy + Delta-G solvation = -3805.725175 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 382.093 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -41.61666 -40.51462 -39.44985 -37.81822 -36.69896 -34.40730 -33.65974 -32.94337 -31.96773 -30.47931 -29.51391 -28.07752 -27.04860 -25.51647 -23.54741 -23.50791 -22.67797 -21.38890 -21.13600 -20.62604 -18.90862 -18.66237 -17.69140 -17.57966 -16.77161 -16.41266 -16.13020 -15.94387 -15.47196 -15.31827 -15.20750 -15.00240 -14.81664 -14.61670 -14.44131 -14.32501 -14.11417 -14.01029 -13.68506 -13.42972 -13.14314 -12.84217 -12.78962 -12.71130 -12.43289 -12.30662 -12.14361 -12.09393 -11.97841 -11.83589 -11.67064 -11.48818 -11.37710 -11.22934 -11.00886 -10.86567 -10.63136 -10.29135 -10.03320 -9.88864 -5.08654 -0.46771 -0.14670 0.41678 1.11583 1.47705 1.62095 1.83668 2.01933 2.51695 3.07963 3.36859 3.51038 3.61525 3.63045 3.71320 3.79248 3.88888 3.96306 3.99173 4.07225 4.10647 4.25387 4.26786 4.29819 4.34709 4.44278 4.47219 4.50121 4.59271 4.62735 4.74831 4.76060 4.76944 4.92805 4.94857 4.96333 4.98773 5.04190 5.07976 5.12554 5.14116 5.16136 5.24010 5.32621 5.33474 5.38591 5.47574 5.50384 5.57525 6.31638 6.40604 7.13877 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C -0.093 4.093 3 C -0.151 4.151 4 C -0.084 4.084 5 H 0.071 0.929 6 C -0.113 4.113 7 C -0.127 4.127 8 C 0.146 3.854 9 H 0.091 0.909 10 N -0.722 5.722 11 C 0.562 3.438 12 O -0.527 6.527 13 C -0.128 4.128 14 C -0.054 4.054 15 C -0.094 4.094 16 Br -0.033 7.033 17 C -0.062 4.062 18 C -0.072 4.072 19 C -0.076 4.076 20 O -0.533 6.533 21 Si 0.678 3.322 22 C -0.017 4.017 23 C -0.129 4.129 24 C -0.114 4.114 25 H 0.054 0.946 26 H 0.053 0.947 27 H 0.057 0.943 28 H 0.070 0.930 29 H 0.058 0.942 30 H 0.053 0.947 31 H 0.053 0.947 32 H 0.066 0.934 33 H 0.072 0.928 34 H 0.070 0.930 35 H 0.068 0.932 36 H 0.399 0.601 37 H 0.139 0.861 38 H 0.142 0.858 39 H 0.084 0.916 40 H 0.384 0.616 41 H -0.255 1.255 42 H -0.250 1.250 43 H 0.147 0.853 44 H 0.064 0.936 45 H 0.068 0.932 46 H 0.065 0.935 47 H 0.069 0.931 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.883 -2.071 0.946 3.673 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.208 4.208 2 C -0.111 4.111 3 C -0.208 4.208 4 C -0.102 4.102 5 H 0.089 0.911 6 C -0.151 4.151 7 C -0.165 4.165 8 C 0.042 3.958 9 H 0.109 0.891 10 N -0.374 5.374 11 C 0.349 3.651 12 O -0.404 6.404 13 C -0.132 4.132 14 C -0.074 4.074 15 C -0.174 4.174 16 Br 0.053 6.947 17 C -0.082 4.082 18 C -0.073 4.073 19 C -0.185 4.185 20 O -0.341 6.341 21 Si 0.579 3.421 22 C -0.036 4.036 23 C -0.168 4.168 24 C -0.152 4.152 25 H 0.073 0.927 26 H 0.072 0.928 27 H 0.076 0.924 28 H 0.088 0.912 29 H 0.077 0.923 30 H 0.072 0.928 31 H 0.073 0.927 32 H 0.085 0.915 33 H 0.091 0.909 34 H 0.089 0.911 35 H 0.087 0.913 36 H 0.234 0.766 37 H 0.156 0.844 38 H 0.159 0.841 39 H 0.102 0.898 40 H 0.232 0.768 41 H -0.179 1.179 42 H -0.175 1.175 43 H 0.164 0.836 44 H 0.083 0.917 45 H 0.087 0.913 46 H 0.084 0.916 47 H 0.088 0.912 Dipole moment (debyes) X Y Z Total from point charges -2.840 -1.755 1.516 3.667 hybrid contribution 0.985 0.520 -0.327 1.161 sum -1.855 -1.236 1.189 2.526 Atomic orbital electron populations 1.21909 0.95235 1.01843 1.01792 1.21141 0.95734 0.96221 0.98005 1.21908 1.01248 0.95901 1.01762 1.21258 0.95201 0.95487 0.98279 0.91051 1.21601 1.00909 0.95166 0.97378 1.21819 0.93655 1.01424 0.99582 1.21077 0.93842 0.92751 0.88139 0.89111 1.46022 1.17526 1.56583 1.17234 1.18089 0.81523 0.78307 0.87163 1.90814 1.56022 1.59454 1.34094 1.19958 0.96161 1.02886 0.94184 1.21274 0.99377 0.95944 0.90832 1.21592 0.96335 1.05180 0.94247 1.96833 1.66890 1.97841 1.33150 1.21185 0.92427 0.96694 0.97889 1.19201 0.94659 1.00043 0.93413 1.24773 0.87091 0.94715 1.11949 1.86592 1.18033 1.33837 1.95617 0.95115 0.86842 0.83954 0.76216 1.21273 0.93305 0.90766 0.98245 1.21918 1.01347 0.94752 0.98778 1.21605 0.95025 1.00760 0.97765 0.92726 0.92766 0.92379 0.91195 0.92346 0.92759 0.92740 0.91547 0.90925 0.91135 0.91283 0.76560 0.84361 0.84052 0.89809 0.76787 1.17942 1.17468 0.83563 0.91741 0.91346 0.91644 0.91200 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.17 8.84 37.16 0.33 0.50 16 2 C -0.09 0.09 2.51 -90.62 -0.23 -0.14 16 3 C -0.15 0.11 8.84 37.16 0.33 0.44 16 4 C -0.08 0.11 1.78 -90.62 -0.16 -0.05 16 5 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 6 C -0.11 0.19 4.85 -26.73 -0.13 0.06 16 7 C -0.13 0.24 5.39 -26.73 -0.14 0.10 16 8 C 0.15 -0.02 2.45 -67.93 -0.17 -0.19 16 9 H 0.09 0.16 7.58 -51.93 -0.39 -0.23 16 10 N -0.72 0.21 5.03 -54.75 -0.28 -0.07 16 11 C 0.56 1.39 7.74 -12.32 -0.10 1.29 16 12 O -0.53 -3.20 16.01 5.32 0.09 -3.11 16 13 C -0.13 -0.16 5.87 -104.97 -0.62 -0.78 16 14 C -0.05 0.02 9.28 -39.16 -0.36 -0.34 16 15 C -0.09 -0.01 6.22 -39.57 -0.25 -0.26 16 16 Br -0.03 0.01 33.69 -68.01 -2.29 -2.29 16 17 C -0.06 -0.01 8.40 -39.47 -0.33 -0.34 16 18 C -0.07 -0.05 5.38 -104.68 -0.56 -0.62 16 19 C -0.08 0.05 2.79 36.01 0.10 0.15 16 20 O -0.53 -0.41 12.81 -35.23 -0.45 -0.87 16 21 Si 0.68 -1.00 29.84 -169.99 -5.07 -6.07 16 22 C -0.02 -0.03 9.23 -39.18 -0.36 -0.39 16 23 C -0.13 -0.02 5.49 -26.75 -0.15 -0.17 16 24 C -0.11 0.05 4.85 -26.75 -0.13 -0.08 16 25 H 0.05 -0.05 8.14 -51.93 -0.42 -0.48 16 26 H 0.05 -0.05 8.14 -51.93 -0.42 -0.47 16 27 H 0.06 -0.08 6.43 -51.93 -0.33 -0.42 16 28 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 29 H 0.06 -0.04 6.43 -51.93 -0.33 -0.37 16 30 H 0.05 -0.03 8.14 -51.93 -0.42 -0.45 16 31 H 0.05 -0.03 8.14 -51.93 -0.42 -0.46 16 32 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 33 H 0.07 -0.14 6.43 -51.93 -0.33 -0.48 16 34 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 35 H 0.07 -0.18 8.14 -51.93 -0.42 -0.60 16 36 H 0.40 -1.10 6.64 -40.82 -0.27 -1.37 16 37 H 0.14 -0.39 6.41 -52.48 -0.34 -0.73 16 38 H 0.14 -0.16 4.85 -52.49 -0.25 -0.42 16 39 H 0.08 -0.20 7.96 -51.93 -0.41 -0.61 16 40 H 0.38 -1.25 8.74 45.56 0.40 -0.85 16 41 H -0.25 -0.11 7.11 56.52 0.40 0.29 16 42 H -0.25 -0.37 7.04 56.52 0.40 0.03 16 43 H 0.15 0.35 7.65 -52.48 -0.40 -0.05 16 44 H 0.06 -0.02 8.14 -51.93 -0.42 -0.44 16 45 H 0.07 0.16 8.14 -51.93 -0.42 -0.27 16 46 H 0.06 0.01 8.14 -51.93 -0.42 -0.41 16 47 H 0.07 -0.03 6.43 -51.93 -0.33 -0.36 16 LS Contribution 384.68 15.07 5.80 5.80 Total: 0.00 -6.18 384.68 -12.42 -18.60 By element: Atomic # 1 Polarization: -3.88 SS G_CDS: -7.28 Total: -11.16 kcal Atomic # 6 Polarization: 2.10 SS G_CDS: -2.93 Total: -0.83 kcal Atomic # 7 Polarization: 0.21 SS G_CDS: -0.28 Total: -0.07 kcal Atomic # 8 Polarization: -3.61 SS G_CDS: -0.37 Total: -3.98 kcal Atomic # 14 Polarization: -1.00 SS G_CDS: -5.07 Total: -6.07 kcal Atomic # 35 Polarization: 0.01 SS G_CDS: -2.29 Total: -2.29 kcal Total LS contribution 5.80 Total: 5.80 kcal Total: -6.18 -12.42 -18.60 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589126_12335870.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -42.273 kcal (2) G-P(sol) polarization free energy of solvation -6.181 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -48.455 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.415 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.596 kcal (6) G-S(sol) free energy of system = (1) + (5) -60.870 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.72 seconds