Wall clock time and date at job start Sun Mar 7 2021 02:04:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.52997 * 109.47232 * 2 1 4 4 C 1.53002 * 109.47143 * 120.00043 * 2 1 3 5 5 H 1.09002 * 109.47067 * 300.00018 * 4 2 1 6 6 C 1.53005 * 109.46982 * 59.99669 * 4 2 1 7 7 C 1.52999 * 109.47159 * 179.97438 * 6 4 2 8 8 C 1.52997 * 109.47317 * 300.00546 * 7 6 4 9 9 H 1.09002 * 109.47153 * 299.99641 * 8 7 6 10 10 N 1.46500 * 109.47007 * 179.97438 * 8 7 6 11 11 C 1.34779 * 119.99793 * 154.99772 * 10 8 7 12 12 O 1.21549 * 120.00209 * 0.02562 * 11 10 8 13 13 C 1.47854 * 119.99760 * 179.97438 * 11 10 8 14 14 C 1.39541 * 120.13935 * 0.02562 * 13 11 10 15 15 C 1.38072 * 119.84418 * 179.97438 * 14 13 11 16 16 Br 1.89097 * 119.94045 * 179.97438 * 15 14 13 17 17 C 1.38429 * 120.12125 * 359.97438 * 15 14 13 18 18 C 1.38358 * 120.28175 * 0.02562 * 17 15 14 19 19 C 1.50708 * 119.92243 * 180.02562 * 18 17 15 20 20 O 1.42896 * 109.46854 * 244.99980 * 19 18 17 21 21 Si 1.86302 * 109.46760 * 4.99871 * 19 18 17 22 22 C 1.37943 * 120.15802 * 359.73921 * 18 17 15 23 23 C 1.53000 * 109.47060 * 59.99960 * 8 7 6 24 24 C 1.52997 * 109.47143 * 179.97438 * 4 2 1 25 25 H 1.09002 * 109.47153 * 299.99992 * 1 2 3 26 26 H 1.09001 * 109.46832 * 59.99801 * 1 2 3 27 27 H 1.09000 * 109.47611 * 179.97438 * 1 2 3 28 28 H 1.09002 * 109.47153 * 240.00008 * 2 1 3 29 29 H 1.09000 * 109.47140 * 179.97438 * 3 2 1 30 30 H 1.08998 * 109.47624 * 300.00318 * 3 2 1 31 31 H 1.09002 * 109.47045 * 59.99942 * 3 2 1 32 32 H 1.09002 * 109.46935 * 60.00267 * 6 4 2 33 33 H 1.09000 * 109.47360 * 300.00293 * 6 4 2 34 34 H 1.08996 * 109.46929 * 179.97438 * 7 6 4 35 35 H 1.09002 * 109.46716 * 60.00455 * 7 6 4 36 36 H 0.97004 * 120.00223 * 334.99863 * 10 8 7 37 37 H 1.08007 * 120.07924 * 0.02562 * 14 13 11 38 38 H 1.07996 * 119.85602 * 179.97438 * 17 15 14 39 39 H 1.09000 * 109.46735 * 124.99839 * 19 18 17 40 40 H 0.96704 * 113.99541 * 179.97438 * 20 19 18 41 41 H 1.48502 * 109.99728 * 178.68285 * 21 19 18 42 42 H 1.48504 * 109.99887 * 299.99862 * 21 19 18 43 43 H 1.08007 * 120.06816 * 180.27521 * 22 18 17 44 44 H 1.08992 * 109.47399 * 59.99823 * 23 8 7 45 45 H 1.09004 * 109.46724 * 180.02562 * 23 8 7 46 46 H 1.09002 * 109.46695 * 299.99691 * 24 4 2 47 47 H 1.08993 * 109.47194 * 59.99677 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7213 1.2493 5 1 1.6766 -0.2074 2.1392 6 6 1.5299 -2.1638 1.2493 7 6 2.0404 -2.8853 2.4981 8 6 3.5704 -2.8853 2.4976 9 1 3.9334 -3.3990 1.6074 10 7 4.0591 -3.5756 3.6937 11 6 5.2811 -4.1442 3.6916 12 8 5.9778 -4.0838 2.6974 13 6 5.7746 -4.8404 4.8990 14 6 4.9774 -4.9109 6.0421 15 6 5.4441 -5.5630 7.1661 16 35 4.3664 -5.6597 8.7169 17 6 6.6995 -6.1463 7.1598 18 6 7.4942 -6.0794 6.0292 19 6 8.8594 -6.7177 6.0311 20 8 9.8588 -5.7049 5.8989 21 14 9.1135 -7.6356 7.6323 22 6 7.0375 -5.4350 4.8983 23 6 4.0804 -1.4428 2.4977 24 6 3.5700 -0.7218 1.2489 25 1 -0.3633 0.5138 0.8900 26 1 -0.3633 0.5139 -0.8900 27 1 -0.3634 -1.0276 -0.0005 28 1 1.8933 -0.5138 -0.8900 29 1 3.1300 1.4424 0.0005 30 1 1.6767 1.9564 -0.8899 31 1 1.6766 1.9563 0.8900 32 1 1.8932 -2.6776 0.3593 33 1 0.4399 -2.1638 1.2492 34 1 1.6766 -3.9127 2.4983 35 1 1.6774 -2.3715 3.3883 36 1 3.5033 -3.6234 4.4873 37 1 3.9973 -4.4572 6.0474 38 1 7.0604 -6.6549 8.0415 39 1 8.9357 -7.4147 5.1966 40 1 10.7643 -6.0444 5.8929 41 1 10.4436 -8.2960 7.6335 42 1 9.0118 -6.6962 8.7779 43 1 7.6573 -5.3875 4.0150 44 1 3.7174 -0.9291 3.3878 45 1 5.1704 -1.4428 2.4968 46 1 3.9328 -1.2360 0.3589 47 1 3.9337 0.3056 1.2486 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14589126_12335870.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:04:47 Heat of formation + Delta-G solvation = -54.971659 kcal Electronic energy + Delta-G solvation = -26891.407873 eV Core-core repulsion = 23085.938451 eV Total energy + Delta-G solvation = -3805.469422 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 382.093 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -41.71251 -40.51182 -39.52377 -37.82240 -36.75794 -34.47077 -33.68715 -32.96033 -31.92245 -30.49287 -29.51057 -28.00945 -27.03200 -25.57624 -23.52293 -23.48473 -22.70368 -21.48069 -21.12461 -20.58022 -18.94580 -18.65393 -17.77448 -17.60003 -16.76539 -16.46548 -16.21289 -16.00730 -15.46298 -15.32070 -15.16402 -15.03184 -14.85499 -14.62015 -14.41684 -14.32597 -14.13654 -14.03564 -13.67190 -13.38595 -13.07632 -12.85554 -12.79785 -12.67381 -12.43483 -12.29000 -12.09891 -12.04416 -12.01526 -11.86204 -11.62748 -11.52393 -11.32303 -11.27977 -11.00412 -10.90977 -10.60698 -10.35617 -10.08315 -9.91453 -4.98975 -0.52944 -0.17226 0.40755 1.18994 1.50212 1.55081 1.87924 1.96179 2.43602 3.14194 3.35334 3.57303 3.64642 3.69083 3.74693 3.80576 3.86856 3.96723 4.02784 4.10597 4.14001 4.27219 4.29981 4.32551 4.38034 4.48379 4.50206 4.54030 4.65102 4.67448 4.74296 4.80138 4.82928 4.91356 4.99296 5.01851 5.03257 5.08279 5.08789 5.14577 5.19103 5.20355 5.28896 5.32601 5.36587 5.37701 5.47474 5.55499 5.63403 6.36795 6.51935 7.03496 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C -0.092 4.092 3 C -0.151 4.151 4 C -0.077 4.077 5 H 0.076 0.924 6 C -0.112 4.112 7 C -0.119 4.119 8 C 0.147 3.853 9 H 0.067 0.933 10 N -0.707 5.707 11 C 0.560 3.440 12 O -0.572 6.572 13 C -0.136 4.136 14 C -0.044 4.044 15 C -0.099 4.099 16 Br -0.026 7.026 17 C -0.064 4.064 18 C -0.078 4.078 19 C -0.088 4.088 20 O -0.557 6.557 21 Si 0.759 3.241 22 C -0.031 4.031 23 C -0.124 4.124 24 C -0.111 4.111 25 H 0.056 0.944 26 H 0.050 0.950 27 H 0.062 0.938 28 H 0.063 0.937 29 H 0.055 0.945 30 H 0.051 0.949 31 H 0.055 0.945 32 H 0.058 0.942 33 H 0.083 0.917 34 H 0.077 0.923 35 H 0.084 0.916 36 H 0.414 0.586 37 H 0.164 0.836 38 H 0.153 0.847 39 H 0.102 0.898 40 H 0.398 0.602 41 H -0.279 1.279 42 H -0.289 1.289 43 H 0.132 0.868 44 H 0.074 0.926 45 H 0.042 0.958 46 H 0.054 0.946 47 H 0.069 0.931 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.365 -2.390 2.056 5.385 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.206 4.206 2 C -0.110 4.110 3 C -0.208 4.208 4 C -0.096 4.096 5 H 0.094 0.906 6 C -0.149 4.149 7 C -0.157 4.157 8 C 0.043 3.957 9 H 0.085 0.915 10 N -0.359 5.359 11 C 0.348 3.652 12 O -0.453 6.453 13 C -0.140 4.140 14 C -0.064 4.064 15 C -0.178 4.178 16 Br 0.060 6.940 17 C -0.083 4.083 18 C -0.079 4.079 19 C -0.196 4.196 20 O -0.368 6.368 21 Si 0.663 3.337 22 C -0.050 4.050 23 C -0.163 4.163 24 C -0.149 4.149 25 H 0.075 0.925 26 H 0.069 0.931 27 H 0.081 0.919 28 H 0.082 0.918 29 H 0.074 0.926 30 H 0.071 0.929 31 H 0.074 0.926 32 H 0.077 0.923 33 H 0.101 0.899 34 H 0.096 0.904 35 H 0.103 0.897 36 H 0.252 0.748 37 H 0.181 0.819 38 H 0.171 0.829 39 H 0.119 0.881 40 H 0.249 0.751 41 H -0.205 1.205 42 H -0.217 1.217 43 H 0.150 0.850 44 H 0.093 0.907 45 H 0.060 0.940 46 H 0.073 0.927 47 H 0.087 0.913 Dipole moment (debyes) X Y Z Total from point charges -4.355 -2.077 2.627 5.493 hybrid contribution 1.478 0.651 -0.658 1.744 sum -2.876 -1.426 1.968 3.766 Atomic orbital electron populations 1.21895 0.94811 1.02165 1.01742 1.21125 0.96041 0.95988 0.97883 1.21909 1.01079 0.96103 1.01750 1.21195 0.94191 0.95887 0.98289 0.90578 1.21599 1.01438 0.94665 0.97242 1.21778 0.91686 1.02097 1.00111 1.21058 0.95255 0.92110 0.87306 0.91451 1.45931 1.16762 1.55391 1.17779 1.18327 0.81832 0.78116 0.86938 1.90788 1.57389 1.61342 1.35737 1.19893 0.96406 1.03382 0.94357 1.21462 0.99993 0.95171 0.89818 1.21704 0.96433 1.05126 0.94583 1.96843 1.66597 1.97825 1.32769 1.21362 0.92490 0.96520 0.97970 1.19348 0.95393 1.00018 0.93170 1.25048 0.86284 0.94649 1.13659 1.86546 1.19346 1.35072 1.95802 0.94223 0.84851 0.81522 0.73082 1.21273 0.93680 0.91757 0.98308 1.21853 0.99695 0.95217 0.99528 1.21569 0.95900 1.00419 0.96980 0.92513 0.93078 0.91864 0.91826 0.92639 0.92938 0.92567 0.92287 0.89901 0.90423 0.89704 0.74832 0.81856 0.82944 0.88063 0.75054 1.20520 1.21653 0.85028 0.90692 0.93961 0.92719 0.91276 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.41 8.84 71.98 0.64 1.05 16 2 C -0.09 0.17 2.51 -10.79 -0.03 0.15 16 3 C -0.15 0.19 8.84 71.98 0.64 0.82 16 4 C -0.08 0.21 1.78 -10.79 -0.02 0.20 16 5 H 0.08 -0.24 8.14 -2.39 -0.02 -0.26 16 6 C -0.11 0.44 4.85 30.60 0.15 0.59 16 7 C -0.12 0.58 5.39 30.59 0.16 0.74 16 8 C 0.15 0.04 2.45 44.99 0.11 0.15 16 9 H 0.07 0.37 7.58 -2.39 -0.02 0.35 16 10 N -0.71 0.26 5.03 -445.40 -2.24 -1.98 16 11 C 0.56 3.51 7.74 86.79 0.67 4.18 16 12 O -0.57 -8.46 16.01 -3.87 -0.06 -8.52 16 13 C -0.14 -0.46 5.87 -20.09 -0.12 -0.58 16 14 C -0.04 0.06 9.28 22.54 0.21 0.27 16 15 C -0.10 0.04 6.22 22.28 0.14 0.18 16 16 Br -0.03 0.04 33.69 -20.37 -0.69 -0.65 16 17 C -0.06 -0.01 8.40 22.34 0.19 0.18 16 18 C -0.08 -0.16 5.38 -19.90 -0.11 -0.27 16 19 C -0.09 0.08 2.79 71.24 0.20 0.28 16 20 O -0.56 -1.31 12.81 -148.98 -1.91 -3.21 16 21 Si 0.76 -2.29 29.84 68.60 2.05 -0.24 16 22 C -0.03 -0.15 9.23 22.53 0.21 0.05 16 23 C -0.12 -0.16 5.49 30.58 0.17 0.01 16 24 C -0.11 0.00 4.85 30.58 0.15 0.15 16 25 H 0.06 -0.17 8.14 -2.39 -0.02 -0.19 16 26 H 0.05 -0.10 8.14 -2.39 -0.02 -0.12 16 27 H 0.06 -0.24 6.43 -2.39 -0.02 -0.25 16 28 H 0.06 -0.03 8.14 -2.39 -0.02 -0.05 16 29 H 0.05 -0.04 6.43 -2.39 -0.02 -0.05 16 30 H 0.05 -0.04 8.14 -2.39 -0.02 -0.06 16 31 H 0.06 -0.08 8.14 -2.39 -0.02 -0.10 16 32 H 0.06 -0.12 8.14 -2.39 -0.02 -0.14 16 33 H 0.08 -0.45 6.43 -2.39 -0.02 -0.47 16 34 H 0.08 -0.43 8.14 -2.39 -0.02 -0.45 16 35 H 0.08 -0.63 8.14 -2.39 -0.02 -0.65 16 36 H 0.41 -2.74 6.64 -92.71 -0.62 -3.36 16 37 H 0.16 -1.20 6.41 -2.91 -0.02 -1.22 16 38 H 0.15 -0.41 4.85 -2.91 -0.01 -0.42 16 39 H 0.10 -0.48 7.96 -2.39 -0.02 -0.50 16 40 H 0.40 -2.35 8.74 -74.05 -0.65 -3.00 16 41 H -0.28 -0.25 7.11 99.48 0.71 0.46 16 42 H -0.29 -1.01 7.04 99.48 0.70 -0.30 16 43 H 0.13 0.99 7.65 -2.91 -0.02 0.96 16 44 H 0.07 -0.06 8.14 -2.39 -0.02 -0.08 16 45 H 0.04 0.29 8.14 -2.39 -0.02 0.27 16 46 H 0.05 0.12 8.14 -2.39 -0.02 0.10 16 47 H 0.07 0.01 6.43 -2.39 -0.02 -0.01 16 Total: 0.00 -16.25 384.68 0.26 -15.99 By element: Atomic # 1 Polarization: -9.30 SS G_CDS: -0.24 Total: -9.54 kcal Atomic # 6 Polarization: 4.80 SS G_CDS: 3.36 Total: 8.15 kcal Atomic # 7 Polarization: 0.26 SS G_CDS: -2.24 Total: -1.98 kcal Atomic # 8 Polarization: -9.77 SS G_CDS: -1.97 Total: -11.74 kcal Atomic # 14 Polarization: -2.29 SS G_CDS: 2.05 Total: -0.24 kcal Atomic # 35 Polarization: 0.04 SS G_CDS: -0.69 Total: -0.65 kcal Total: -16.25 0.26 -15.99 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589126_12335870.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -38.985 kcal (2) G-P(sol) polarization free energy of solvation -16.251 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -55.236 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.265 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.986 kcal (6) G-S(sol) free energy of system = (1) + (5) -54.972 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds