Wall clock time and date at job start Sun Mar 7 2021 02:04:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 C 1.53002 * 109.46969 * 2 1 4 4 C 1.52995 * 109.47577 * 119.99548 * 2 1 3 5 5 H 1.08996 * 109.47575 * 300.00570 * 4 2 1 6 6 C 1.53002 * 109.46925 * 60.00026 * 4 2 1 7 7 C 1.52997 * 109.47415 * 180.02562 * 6 4 2 8 8 C 1.53006 * 109.47164 * 300.00027 * 7 6 4 9 9 H 1.09000 * 109.47050 * 300.00004 * 8 7 6 10 10 N 1.46492 * 109.47363 * 179.97438 * 8 7 6 11 11 C 1.34780 * 120.00132 * 154.99846 * 10 8 7 12 12 O 1.21690 * 119.99844 * 0.02562 * 11 10 8 13 13 C 1.46427 * 119.99813 * 180.02562 * 11 10 8 14 14 C 1.34807 * 119.99638 * 180.02562 * 13 11 10 15 15 C 1.47210 * 120.00082 * 179.97438 * 14 13 11 16 16 C 1.39840 * 120.16797 * 359.72065 * 15 14 13 17 17 C 1.37886 * 119.82685 * 179.78714 * 16 15 14 18 18 C 1.38405 * 120.16985 * 0.47330 * 17 16 15 19 19 C 1.50705 * 119.82702 * 179.76470 * 18 17 16 20 20 O 1.42895 * 109.46913 * 120.01788 * 19 18 17 21 21 Si 1.86293 * 109.47068 * 0.02562 * 19 18 17 22 22 C 1.38403 * 120.34291 * 359.77714 * 18 17 16 23 23 C 1.37887 * 120.17110 * 359.97438 * 22 18 17 24 24 C 1.52999 * 109.46626 * 59.99702 * 8 7 6 25 25 C 1.52996 * 109.47577 * 179.97438 * 4 2 1 26 26 H 1.09000 * 109.47054 * 300.00097 * 1 2 3 27 27 H 1.09004 * 109.47298 * 60.00221 * 1 2 3 28 28 H 1.09001 * 109.46997 * 180.02562 * 1 2 3 29 29 H 1.08999 * 109.47631 * 240.00393 * 2 1 3 30 30 H 1.08992 * 109.47461 * 59.99786 * 3 2 1 31 31 H 1.09002 * 109.47067 * 180.02562 * 3 2 1 32 32 H 1.09004 * 109.46930 * 300.00004 * 3 2 1 33 33 H 1.09000 * 109.46986 * 60.00086 * 6 4 2 34 34 H 1.09001 * 109.47601 * 300.00809 * 6 4 2 35 35 H 1.09001 * 109.46922 * 180.02562 * 7 6 4 36 36 H 1.09000 * 109.47140 * 59.99976 * 7 6 4 37 37 H 0.97006 * 119.99963 * 335.00232 * 10 8 7 38 38 H 1.07999 * 120.00195 * 359.97438 * 13 11 10 39 39 H 1.07999 * 120.00167 * 359.97438 * 14 13 11 40 40 H 1.07997 * 120.08774 * 0.02562 * 16 15 14 41 41 H 1.07999 * 119.91799 * 180.22814 * 17 16 15 42 42 H 1.08999 * 109.46464 * 240.01779 * 19 18 17 43 43 H 0.96699 * 114.00402 * 299.99159 * 20 19 18 44 44 H 1.48499 * 110.00210 * 180.02562 * 21 19 18 45 45 H 1.48496 * 110.00412 * 301.32412 * 21 19 18 46 46 H 1.08004 * 119.91433 * 180.02562 * 22 18 17 47 47 H 1.08007 * 120.08519 * 179.97438 * 23 22 18 48 48 H 1.09000 * 109.47160 * 60.00369 * 24 8 7 49 49 H 1.09002 * 109.46719 * 180.02562 * 24 8 7 50 50 H 1.09000 * 109.47054 * 300.00355 * 25 4 2 51 51 H 1.09001 * 109.46997 * 60.00088 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 6 2.0401 -0.7211 1.2492 5 1 1.6767 -0.2074 2.1392 6 6 1.5301 -2.1636 1.2493 7 6 2.0396 -2.8847 2.4988 8 6 3.5697 -2.8847 2.4994 9 1 3.9333 -3.3986 1.6097 10 7 4.0576 -3.5745 3.6961 11 6 5.2796 -4.1431 3.6951 12 8 5.9778 -4.0830 2.7003 13 6 5.7670 -4.8331 4.8911 14 6 6.9894 -5.4013 4.8903 15 6 7.4797 -6.0946 6.0928 16 6 6.6827 -6.1607 7.2399 17 6 7.1472 -6.8156 8.3609 18 6 8.4027 -7.3981 8.3560 19 6 8.9047 -8.1074 9.5873 20 8 9.1748 -9.4748 9.2724 21 14 7.6103 -8.0222 10.9243 22 6 9.1995 -7.3324 7.2263 23 6 8.7470 -6.6855 6.0958 24 6 4.0795 -1.4421 2.4993 25 6 3.5700 -0.7217 1.2489 26 1 -0.3633 0.5138 0.8900 27 1 -0.3634 0.5138 -0.8900 28 1 -0.3633 -1.0277 0.0005 29 1 1.8934 -0.5137 -0.8900 30 1 1.6766 1.9564 0.8899 31 1 3.1299 1.4426 -0.0005 32 1 1.6766 1.9563 -0.8900 33 1 1.8934 -2.6775 0.3593 34 1 0.4401 -2.1638 1.2492 35 1 1.6766 -3.9125 2.4986 36 1 1.6759 -2.3707 3.3886 37 1 3.5011 -3.6221 4.4893 38 1 5.1475 -4.8861 5.7742 39 1 7.6091 -5.3480 4.0074 40 1 5.7044 -5.7034 7.2466 41 1 6.5313 -6.8708 9.2464 42 1 9.8192 -7.6273 9.9356 43 1 8.4040 -9.9651 8.9552 44 1 8.0934 -8.7175 12.1442 45 1 7.2970 -6.6050 11.2385 46 1 10.1779 -7.7898 7.2299 47 1 9.3702 -6.6347 5.2151 48 1 3.7159 -0.9282 3.3891 49 1 5.1696 -1.4421 2.4993 50 1 3.9330 -1.2358 0.3589 51 1 3.9337 0.3059 1.2486 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14589126_12360594.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:04:57 Heat of formation + Delta-G solvation = -54.017899 kcal Electronic energy + Delta-G solvation = -27135.271316 eV Core-core repulsion = 23385.897496 eV Total energy + Delta-G solvation = -3749.373820 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 330.198 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -41.15037 -40.65328 -39.67894 -37.83698 -36.67613 -35.04498 -34.04470 -32.29346 -31.94647 -31.36177 -29.52142 -28.07437 -27.11170 -24.67313 -24.07022 -23.49866 -23.21495 -21.86136 -21.28899 -20.71031 -20.24863 -18.84436 -18.07288 -17.59543 -16.92009 -16.60097 -16.39049 -16.19992 -15.82504 -15.64609 -15.35031 -15.18423 -15.14404 -14.88411 -14.64383 -14.50211 -14.41777 -14.21179 -14.14311 -13.84842 -13.41467 -13.33109 -13.14002 -13.03609 -12.78476 -12.69689 -12.30618 -12.28367 -12.13362 -12.08329 -12.05256 -11.76328 -11.66320 -11.38034 -11.35125 -11.19987 -10.97476 -10.75843 -10.49625 -10.06656 -9.98656 -9.28374 -5.10344 -0.57262 0.31139 0.90022 1.22440 1.56510 1.91391 2.20866 2.32352 2.77142 3.37083 3.49977 3.58746 3.63561 3.65254 3.72306 3.79003 3.82224 3.97790 4.08945 4.11191 4.18268 4.25699 4.27309 4.29263 4.36261 4.38031 4.45197 4.49459 4.51896 4.60657 4.64069 4.76141 4.76258 4.77023 4.89562 4.93900 4.96364 4.99788 5.03187 5.05544 5.07734 5.12781 5.15300 5.17432 5.25287 5.32500 5.33629 5.35895 5.41032 5.49375 5.54790 5.56623 5.60051 5.81841 6.49999 6.55861 7.30085 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C -0.093 4.093 3 C -0.151 4.151 4 C -0.083 4.083 5 H 0.071 0.929 6 C -0.113 4.113 7 C -0.126 4.126 8 C 0.145 3.855 9 H 0.088 0.912 10 N -0.724 5.724 11 C 0.548 3.452 12 O -0.543 6.543 13 C -0.214 4.214 14 C -0.017 4.017 15 C -0.072 4.072 16 C -0.096 4.096 17 C -0.120 4.120 18 C -0.108 4.108 19 C -0.071 4.071 20 O -0.539 6.539 21 Si 0.689 3.311 22 C -0.095 4.095 23 C -0.092 4.092 24 C -0.128 4.128 25 C -0.114 4.114 26 H 0.053 0.947 27 H 0.053 0.947 28 H 0.057 0.943 29 H 0.070 0.930 30 H 0.053 0.947 31 H 0.058 0.942 32 H 0.053 0.947 33 H 0.065 0.935 34 H 0.071 0.929 35 H 0.069 0.931 36 H 0.068 0.932 37 H 0.400 0.600 38 H 0.130 0.870 39 H 0.137 0.863 40 H 0.132 0.868 41 H 0.130 0.870 42 H 0.115 0.885 43 H 0.380 0.620 44 H -0.254 1.254 45 H -0.258 1.258 46 H 0.131 0.869 47 H 0.132 0.868 48 H 0.063 0.937 49 H 0.067 0.933 50 H 0.064 0.936 51 H 0.069 0.931 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.876 -0.299 1.625 5.148 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.208 4.208 2 C -0.111 4.111 3 C -0.208 4.208 4 C -0.102 4.102 5 H 0.089 0.911 6 C -0.151 4.151 7 C -0.164 4.164 8 C 0.041 3.959 9 H 0.106 0.894 10 N -0.374 5.374 11 C 0.337 3.663 12 O -0.422 6.422 13 C -0.234 4.234 14 C -0.037 4.037 15 C -0.073 4.073 16 C -0.114 4.114 17 C -0.137 4.137 18 C -0.109 4.109 19 C -0.182 4.182 20 O -0.344 6.344 21 Si 0.591 3.409 22 C -0.113 4.113 23 C -0.110 4.110 24 C -0.167 4.167 25 C -0.152 4.152 26 H 0.073 0.927 27 H 0.072 0.928 28 H 0.076 0.924 29 H 0.088 0.912 30 H 0.073 0.927 31 H 0.077 0.923 32 H 0.072 0.928 33 H 0.084 0.916 34 H 0.090 0.910 35 H 0.088 0.912 36 H 0.086 0.914 37 H 0.234 0.766 38 H 0.148 0.852 39 H 0.155 0.845 40 H 0.149 0.851 41 H 0.147 0.853 42 H 0.133 0.867 43 H 0.227 0.773 44 H -0.179 1.179 45 H -0.183 1.183 46 H 0.149 0.851 47 H 0.149 0.851 48 H 0.082 0.918 49 H 0.086 0.914 50 H 0.083 0.917 51 H 0.087 0.913 Dipole moment (debyes) X Y Z Total from point charges -3.989 0.197 1.914 4.429 hybrid contribution 0.219 0.325 0.159 0.423 sum -3.770 0.522 2.073 4.334 Atomic orbital electron populations 1.21908 0.95239 1.01839 1.01778 1.21145 0.95735 0.96227 0.98033 1.21907 1.01245 0.95900 1.01749 1.21248 0.95216 0.95480 0.98226 0.91093 1.21603 1.00860 0.95189 0.97447 1.21811 0.93847 1.01293 0.99442 1.21024 0.93701 0.92706 0.88481 0.89357 1.45983 1.17755 1.56696 1.16962 1.18335 0.81390 0.78461 0.88140 1.90831 1.56183 1.60173 1.34989 1.22918 0.98435 1.03602 0.98473 1.22406 0.94792 0.90386 0.96082 1.19074 0.94937 0.99576 0.93665 1.21354 0.99663 0.98224 0.92122 1.20953 0.95358 0.98936 0.98450 1.20530 0.94641 0.99079 0.96621 1.25103 1.08176 0.84063 1.00841 1.86512 1.39434 1.20188 1.88302 0.94713 0.84929 0.83148 0.78079 1.20991 1.00051 0.98065 0.92153 1.21467 0.94804 0.96180 0.98583 1.21924 1.01272 0.94889 0.98616 1.21624 0.95019 1.00724 0.97821 0.92741 0.92761 0.92384 0.91198 0.92743 0.92349 0.92769 0.91588 0.90999 0.91248 0.91358 0.76563 0.85238 0.84482 0.85070 0.85283 0.86748 0.77292 1.17901 1.18277 0.85149 0.85058 0.91844 0.91437 0.91676 0.91265 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.16 8.84 37.16 0.33 0.49 16 2 C -0.09 0.08 2.51 -90.62 -0.23 -0.15 16 3 C -0.15 0.10 8.84 37.16 0.33 0.43 16 4 C -0.08 0.10 1.78 -90.62 -0.16 -0.07 16 5 H 0.07 -0.06 8.14 -51.93 -0.42 -0.49 16 6 C -0.11 0.17 4.85 -26.73 -0.13 0.04 16 7 C -0.13 0.22 5.39 -26.73 -0.14 0.08 16 8 C 0.15 0.01 2.45 -67.93 -0.17 -0.16 16 9 H 0.09 0.20 7.58 -51.93 -0.39 -0.19 16 10 N -0.72 0.31 5.07 -55.20 -0.28 0.03 16 11 C 0.55 1.17 7.71 -12.96 -0.10 1.07 16 12 O -0.54 -3.35 15.89 5.20 0.08 -3.27 16 13 C -0.21 0.04 9.41 -37.50 -0.35 -0.32 16 14 C -0.02 -0.01 9.46 -37.16 -0.35 -0.36 16 15 C -0.07 0.00 5.87 -105.06 -0.62 -0.62 16 16 C -0.10 0.10 9.41 -39.11 -0.37 -0.27 16 17 C -0.12 0.13 8.65 -39.65 -0.34 -0.21 16 18 C -0.11 0.04 5.40 -104.50 -0.56 -0.53 16 19 C -0.07 0.05 2.82 36.01 0.10 0.15 16 20 O -0.54 0.07 12.76 -35.23 -0.45 -0.38 16 21 Si 0.69 -1.06 29.77 -169.99 -5.06 -6.12 16 22 C -0.09 -0.01 9.59 -39.65 -0.38 -0.39 16 23 C -0.09 0.00 9.80 -39.12 -0.38 -0.38 16 24 C -0.13 -0.04 5.50 -26.71 -0.15 -0.19 16 25 C -0.11 0.04 4.85 -26.71 -0.13 -0.09 16 26 H 0.05 -0.05 8.14 -51.93 -0.42 -0.48 16 27 H 0.05 -0.04 8.14 -51.93 -0.42 -0.47 16 28 H 0.06 -0.08 6.43 -51.93 -0.33 -0.41 16 29 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 30 H 0.05 -0.03 8.14 -51.93 -0.42 -0.46 16 31 H 0.06 -0.04 6.43 -51.93 -0.33 -0.37 16 32 H 0.05 -0.03 8.14 -51.93 -0.42 -0.45 16 33 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 34 H 0.07 -0.13 6.43 -51.93 -0.33 -0.47 16 35 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 36 H 0.07 -0.16 8.14 -51.93 -0.42 -0.59 16 37 H 0.40 -1.28 8.58 -40.82 -0.35 -1.63 16 38 H 0.13 -0.39 6.07 -52.49 -0.32 -0.71 16 39 H 0.14 0.16 7.52 -52.49 -0.39 -0.23 16 40 H 0.13 -0.42 6.17 -52.49 -0.32 -0.74 16 41 H 0.13 -0.38 4.85 -52.49 -0.25 -0.64 16 42 H 0.12 -0.02 7.96 -51.93 -0.41 -0.43 16 43 H 0.38 -1.51 8.70 45.56 0.40 -1.11 16 44 H -0.25 -0.47 7.11 56.52 0.40 -0.07 16 45 H -0.26 -0.18 7.11 56.52 0.40 0.22 16 46 H 0.13 -0.05 8.06 -52.48 -0.42 -0.47 16 47 H 0.13 -0.18 8.06 -52.48 -0.42 -0.60 16 48 H 0.06 -0.01 8.14 -51.93 -0.42 -0.44 16 49 H 0.07 0.16 8.14 -51.93 -0.42 -0.26 16 50 H 0.06 0.03 8.14 -51.93 -0.42 -0.40 16 51 H 0.07 -0.02 6.43 -51.93 -0.33 -0.36 16 LS Contribution 397.80 15.07 5.99 5.99 Total: 0.00 -6.91 397.80 -12.02 -18.93 By element: Atomic # 1 Polarization: -5.21 SS G_CDS: -8.50 Total: -13.71 kcal Atomic # 6 Polarization: 2.33 SS G_CDS: -3.81 Total: -1.48 kcal Atomic # 7 Polarization: 0.31 SS G_CDS: -0.28 Total: 0.03 kcal Atomic # 8 Polarization: -3.28 SS G_CDS: -0.37 Total: -3.65 kcal Atomic # 14 Polarization: -1.06 SS G_CDS: -5.06 Total: -6.12 kcal Total LS contribution 5.99 Total: 5.99 kcal Total: -6.91 -12.02 -18.93 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589126_12360594.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -35.086 kcal (2) G-P(sol) polarization free energy of solvation -6.909 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -41.994 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.023 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.932 kcal (6) G-S(sol) free energy of system = (1) + (5) -54.018 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds