Wall clock time and date at job start Sun Mar 7 2021 02:04:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 C 1.53002 * 109.46969 * 2 1 4 4 C 1.52995 * 109.47577 * 119.99548 * 2 1 3 5 5 H 1.08996 * 109.47575 * 300.00570 * 4 2 1 6 6 C 1.53002 * 109.46925 * 60.00026 * 4 2 1 7 7 C 1.52997 * 109.47415 * 180.02562 * 6 4 2 8 8 C 1.53006 * 109.47164 * 300.00027 * 7 6 4 9 9 H 1.09000 * 109.47050 * 300.00004 * 8 7 6 10 10 N 1.46492 * 109.47363 * 179.97438 * 8 7 6 11 11 C 1.34780 * 120.00132 * 154.99846 * 10 8 7 12 12 O 1.21690 * 119.99844 * 0.02562 * 11 10 8 13 13 C 1.46427 * 119.99813 * 180.02562 * 11 10 8 14 14 C 1.34807 * 119.99638 * 180.02562 * 13 11 10 15 15 C 1.47210 * 120.00082 * 179.97438 * 14 13 11 16 16 C 1.39840 * 120.16797 * 359.72065 * 15 14 13 17 17 C 1.37886 * 119.82685 * 179.78714 * 16 15 14 18 18 C 1.38405 * 120.16985 * 0.47330 * 17 16 15 19 19 C 1.50705 * 119.82702 * 179.76470 * 18 17 16 20 20 O 1.42895 * 109.46913 * 120.01788 * 19 18 17 21 21 Si 1.86293 * 109.47068 * 0.02562 * 19 18 17 22 22 C 1.38403 * 120.34291 * 359.77714 * 18 17 16 23 23 C 1.37887 * 120.17110 * 359.97438 * 22 18 17 24 24 C 1.52999 * 109.46626 * 59.99702 * 8 7 6 25 25 C 1.52996 * 109.47577 * 179.97438 * 4 2 1 26 26 H 1.09000 * 109.47054 * 300.00097 * 1 2 3 27 27 H 1.09004 * 109.47298 * 60.00221 * 1 2 3 28 28 H 1.09001 * 109.46997 * 180.02562 * 1 2 3 29 29 H 1.08999 * 109.47631 * 240.00393 * 2 1 3 30 30 H 1.08992 * 109.47461 * 59.99786 * 3 2 1 31 31 H 1.09002 * 109.47067 * 180.02562 * 3 2 1 32 32 H 1.09004 * 109.46930 * 300.00004 * 3 2 1 33 33 H 1.09000 * 109.46986 * 60.00086 * 6 4 2 34 34 H 1.09001 * 109.47601 * 300.00809 * 6 4 2 35 35 H 1.09001 * 109.46922 * 180.02562 * 7 6 4 36 36 H 1.09000 * 109.47140 * 59.99976 * 7 6 4 37 37 H 0.97006 * 119.99963 * 335.00232 * 10 8 7 38 38 H 1.07999 * 120.00195 * 359.97438 * 13 11 10 39 39 H 1.07999 * 120.00167 * 359.97438 * 14 13 11 40 40 H 1.07997 * 120.08774 * 0.02562 * 16 15 14 41 41 H 1.07999 * 119.91799 * 180.22814 * 17 16 15 42 42 H 1.08999 * 109.46464 * 240.01779 * 19 18 17 43 43 H 0.96699 * 114.00402 * 299.99159 * 20 19 18 44 44 H 1.48499 * 110.00210 * 180.02562 * 21 19 18 45 45 H 1.48496 * 110.00412 * 301.32412 * 21 19 18 46 46 H 1.08004 * 119.91433 * 180.02562 * 22 18 17 47 47 H 1.08007 * 120.08519 * 179.97438 * 23 22 18 48 48 H 1.09000 * 109.47160 * 60.00369 * 24 8 7 49 49 H 1.09002 * 109.46719 * 180.02562 * 24 8 7 50 50 H 1.09000 * 109.47054 * 300.00355 * 25 4 2 51 51 H 1.09001 * 109.46997 * 60.00088 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 6 2.0401 -0.7211 1.2492 5 1 1.6767 -0.2074 2.1392 6 6 1.5301 -2.1636 1.2493 7 6 2.0396 -2.8847 2.4988 8 6 3.5697 -2.8847 2.4994 9 1 3.9333 -3.3986 1.6097 10 7 4.0576 -3.5745 3.6961 11 6 5.2796 -4.1431 3.6951 12 8 5.9778 -4.0830 2.7003 13 6 5.7670 -4.8331 4.8911 14 6 6.9894 -5.4013 4.8903 15 6 7.4797 -6.0946 6.0928 16 6 6.6827 -6.1607 7.2399 17 6 7.1472 -6.8156 8.3609 18 6 8.4027 -7.3981 8.3560 19 6 8.9047 -8.1074 9.5873 20 8 9.1748 -9.4748 9.2724 21 14 7.6103 -8.0222 10.9243 22 6 9.1995 -7.3324 7.2263 23 6 8.7470 -6.6855 6.0958 24 6 4.0795 -1.4421 2.4993 25 6 3.5700 -0.7217 1.2489 26 1 -0.3633 0.5138 0.8900 27 1 -0.3634 0.5138 -0.8900 28 1 -0.3633 -1.0277 0.0005 29 1 1.8934 -0.5137 -0.8900 30 1 1.6766 1.9564 0.8899 31 1 3.1299 1.4426 -0.0005 32 1 1.6766 1.9563 -0.8900 33 1 1.8934 -2.6775 0.3593 34 1 0.4401 -2.1638 1.2492 35 1 1.6766 -3.9125 2.4986 36 1 1.6759 -2.3707 3.3886 37 1 3.5011 -3.6221 4.4893 38 1 5.1475 -4.8861 5.7742 39 1 7.6091 -5.3480 4.0074 40 1 5.7044 -5.7034 7.2466 41 1 6.5313 -6.8708 9.2464 42 1 9.8192 -7.6273 9.9356 43 1 8.4040 -9.9651 8.9552 44 1 8.0934 -8.7175 12.1442 45 1 7.2970 -6.6050 11.2385 46 1 10.1779 -7.7898 7.2299 47 1 9.3702 -6.6347 5.2151 48 1 3.7159 -0.9282 3.3891 49 1 5.1696 -1.4421 2.4993 50 1 3.9330 -1.2358 0.3589 51 1 3.9337 0.3059 1.2486 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_14589126_12360594.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:04:56 Heat of formation + Delta-G solvation = -48.439166 kcal Electronic energy + Delta-G solvation = -27135.029404 eV Core-core repulsion = 23385.897496 eV Total energy + Delta-G solvation = -3749.131908 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 330.198 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -41.22363 -40.59151 -39.72481 -37.78794 -36.70965 -35.06349 -34.08499 -32.22222 -31.90946 -31.32889 -29.51121 -28.00884 -27.07975 -24.66520 -23.99428 -23.46831 -23.18692 -21.86735 -21.30992 -20.65896 -20.25694 -18.81354 -18.07993 -17.60462 -16.88030 -16.61353 -16.35335 -16.17246 -15.90525 -15.64388 -15.30276 -15.14752 -15.12277 -14.89045 -14.56723 -14.52208 -14.39890 -14.19911 -14.14724 -13.80414 -13.37888 -13.28785 -13.07422 -13.03213 -12.75895 -12.65987 -12.29403 -12.26783 -12.09555 -12.04041 -12.03260 -11.70948 -11.62334 -11.36410 -11.32614 -11.24962 -10.96839 -10.84756 -10.43981 -10.07364 -9.99284 -9.24321 -5.00042 -0.55619 0.38754 0.88438 1.31069 1.63369 1.97135 2.18212 2.24266 2.81283 3.47081 3.56826 3.65153 3.67630 3.71175 3.77928 3.83750 3.94229 4.03343 4.11642 4.18585 4.20469 4.30568 4.33311 4.35382 4.38705 4.44026 4.50647 4.52855 4.54824 4.66139 4.67804 4.80455 4.82874 4.83378 4.96311 5.01733 5.02056 5.04366 5.09138 5.09187 5.13287 5.17003 5.19418 5.21213 5.29656 5.37111 5.38372 5.38732 5.47196 5.54309 5.55423 5.59482 5.63470 5.89408 6.56538 6.75342 7.23532 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C -0.093 4.093 3 C -0.151 4.151 4 C -0.076 4.076 5 H 0.076 0.924 6 C -0.113 4.113 7 C -0.117 4.117 8 C 0.146 3.854 9 H 0.060 0.940 10 N -0.709 5.709 11 C 0.540 3.460 12 O -0.594 6.594 13 C -0.207 4.207 14 C -0.023 4.023 15 C -0.081 4.081 16 C -0.094 4.094 17 C -0.122 4.122 18 C -0.112 4.112 19 C -0.080 4.080 20 O -0.556 6.556 21 Si 0.782 3.218 22 C -0.107 4.107 23 C -0.104 4.104 24 C -0.123 4.123 25 C -0.112 4.112 26 H 0.056 0.944 27 H 0.050 0.950 28 H 0.062 0.938 29 H 0.062 0.938 30 H 0.056 0.944 31 H 0.054 0.946 32 H 0.052 0.948 33 H 0.056 0.944 34 H 0.082 0.918 35 H 0.075 0.925 36 H 0.085 0.915 37 H 0.417 0.583 38 H 0.165 0.835 39 H 0.120 0.880 40 H 0.158 0.842 41 H 0.151 0.849 42 H 0.105 0.895 43 H 0.396 0.604 44 H -0.303 1.303 45 H -0.282 1.282 46 H 0.128 0.872 47 H 0.135 0.865 48 H 0.075 0.925 49 H 0.040 0.960 50 H 0.052 0.948 51 H 0.069 0.931 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.001 -0.192 2.932 7.593 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.206 4.206 2 C -0.111 4.111 3 C -0.208 4.208 4 C -0.095 4.095 5 H 0.095 0.905 6 C -0.150 4.150 7 C -0.155 4.155 8 C 0.041 3.959 9 H 0.079 0.921 10 N -0.359 5.359 11 C 0.330 3.670 12 O -0.476 6.476 13 C -0.227 4.227 14 C -0.043 4.043 15 C -0.081 4.081 16 C -0.112 4.112 17 C -0.139 4.139 18 C -0.113 4.113 19 C -0.189 4.189 20 O -0.365 6.365 21 Si 0.688 3.312 22 C -0.125 4.125 23 C -0.122 4.122 24 C -0.161 4.161 25 C -0.150 4.150 26 H 0.075 0.925 27 H 0.069 0.931 28 H 0.081 0.919 29 H 0.081 0.919 30 H 0.075 0.925 31 H 0.073 0.927 32 H 0.071 0.929 33 H 0.075 0.925 34 H 0.100 0.900 35 H 0.094 0.906 36 H 0.103 0.897 37 H 0.255 0.745 38 H 0.183 0.817 39 H 0.138 0.862 40 H 0.176 0.824 41 H 0.168 0.832 42 H 0.123 0.877 43 H 0.246 0.754 44 H -0.231 1.231 45 H -0.208 1.208 46 H 0.146 0.854 47 H 0.153 0.847 48 H 0.093 0.907 49 H 0.059 0.941 50 H 0.071 0.929 51 H 0.087 0.913 Dipole moment (debyes) X Y Z Total from point charges -6.153 0.301 3.210 6.946 hybrid contribution 0.935 0.291 -0.254 1.011 sum -5.218 0.592 2.956 6.026 Atomic orbital electron populations 1.21892 0.94775 1.02147 1.01771 1.21133 0.96081 0.96034 0.97874 1.21906 1.01065 0.96052 1.01779 1.21182 0.94176 0.95832 0.98275 0.90525 1.21605 1.01405 0.94743 0.97291 1.21758 0.91890 1.01892 0.99960 1.20974 0.95110 0.92098 0.87702 0.92146 1.45886 1.17129 1.55450 1.17454 1.18792 0.81633 0.78332 0.88205 1.90811 1.57668 1.62197 1.36960 1.23031 0.98483 1.02700 0.98498 1.22354 0.95082 0.90935 0.95899 1.19115 0.95161 0.99888 0.93950 1.21659 1.00488 0.97654 0.91370 1.21187 0.95122 0.98366 0.99207 1.20625 0.95083 0.99178 0.96386 1.25278 1.08378 0.83914 1.01361 1.86472 1.40989 1.20516 1.88478 0.93676 0.83103 0.79797 0.74619 1.21059 1.00294 0.98604 0.92593 1.21602 0.95262 0.96445 0.98852 1.21854 0.99592 0.95329 0.99367 1.21593 0.95930 1.00409 0.97022 0.92458 0.93058 0.91911 0.91930 0.92495 0.92659 0.92938 0.92508 0.89956 0.90646 0.89672 0.74526 0.81744 0.86220 0.82430 0.83220 0.87724 0.75433 1.23132 1.20846 0.85408 0.84746 0.90651 0.94082 0.92934 0.91277 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.40 8.84 71.98 0.64 1.04 16 2 C -0.09 0.16 2.51 -10.80 -0.03 0.13 16 3 C -0.15 0.19 8.84 71.98 0.64 0.82 16 4 C -0.08 0.20 1.78 -10.80 -0.02 0.18 16 5 H 0.08 -0.24 8.14 -2.39 -0.02 -0.26 16 6 C -0.11 0.40 4.85 30.59 0.15 0.55 16 7 C -0.12 0.54 5.39 30.60 0.16 0.71 16 8 C 0.15 0.07 2.45 44.99 0.11 0.18 16 9 H 0.06 0.40 7.58 -2.39 -0.02 0.38 16 10 N -0.71 0.88 5.07 -446.77 -2.27 -1.39 16 11 C 0.54 2.63 7.71 86.37 0.67 3.30 16 12 O -0.59 -8.73 15.89 -4.32 -0.07 -8.79 16 13 C -0.21 0.19 9.41 23.62 0.22 0.41 16 14 C -0.02 -0.03 9.46 23.84 0.23 0.19 16 15 C -0.08 0.00 5.87 -20.15 -0.12 -0.12 16 16 C -0.09 0.35 9.41 22.57 0.21 0.56 16 17 C -0.12 0.46 8.65 22.23 0.19 0.65 16 18 C -0.11 0.11 5.40 -19.78 -0.11 0.01 16 19 C -0.08 0.11 2.82 71.24 0.20 0.31 16 20 O -0.56 0.13 12.76 -148.98 -1.90 -1.77 16 21 Si 0.78 -2.88 29.77 68.60 2.04 -0.84 16 22 C -0.11 -0.10 9.59 22.23 0.21 0.12 16 23 C -0.10 -0.09 9.80 22.57 0.22 0.13 16 24 C -0.12 -0.16 5.50 30.61 0.17 0.01 16 25 C -0.11 -0.03 4.85 30.61 0.15 0.12 16 26 H 0.06 -0.17 8.14 -2.39 -0.02 -0.19 16 27 H 0.05 -0.10 8.14 -2.38 -0.02 -0.12 16 28 H 0.06 -0.22 6.43 -2.39 -0.02 -0.24 16 29 H 0.06 -0.01 8.14 -2.39 -0.02 -0.03 16 30 H 0.06 -0.09 8.14 -2.39 -0.02 -0.11 16 31 H 0.05 -0.04 6.43 -2.39 -0.02 -0.05 16 32 H 0.05 -0.05 8.14 -2.38 -0.02 -0.06 16 33 H 0.06 -0.08 8.14 -2.39 -0.02 -0.10 16 34 H 0.08 -0.42 6.43 -2.39 -0.02 -0.44 16 35 H 0.07 -0.39 8.14 -2.39 -0.02 -0.41 16 36 H 0.08 -0.63 8.14 -2.39 -0.02 -0.65 16 37 H 0.42 -3.46 8.58 -92.70 -0.80 -4.26 16 38 H 0.17 -1.44 6.07 -2.91 -0.02 -1.46 16 39 H 0.12 0.57 7.52 -2.91 -0.02 0.54 16 40 H 0.16 -1.52 6.17 -2.91 -0.02 -1.54 16 41 H 0.15 -1.25 4.85 -2.91 -0.01 -1.26 16 42 H 0.11 0.03 7.96 -2.39 -0.02 0.01 16 43 H 0.40 -3.32 8.70 -74.06 -0.64 -3.96 16 44 H -0.30 -1.36 7.11 99.48 0.71 -0.65 16 45 H -0.28 -0.09 7.11 99.48 0.71 0.62 16 46 H 0.13 0.08 8.06 -2.91 -0.02 0.05 16 47 H 0.13 -0.12 8.06 -2.91 -0.02 -0.15 16 48 H 0.07 -0.08 8.14 -2.39 -0.02 -0.10 16 49 H 0.04 0.28 8.14 -2.39 -0.02 0.26 16 50 H 0.05 0.14 8.14 -2.39 -0.02 0.12 16 51 H 0.07 0.01 6.43 -2.39 -0.02 0.00 16 Total: 0.00 -18.77 397.80 1.23 -17.55 By element: Atomic # 1 Polarization: -13.58 SS G_CDS: -0.48 Total: -14.06 kcal Atomic # 6 Polarization: 5.41 SS G_CDS: 3.89 Total: 9.30 kcal Atomic # 7 Polarization: 0.88 SS G_CDS: -2.27 Total: -1.39 kcal Atomic # 8 Polarization: -8.59 SS G_CDS: -1.97 Total: -10.56 kcal Atomic # 14 Polarization: -2.88 SS G_CDS: 2.04 Total: -0.84 kcal Total: -18.77 1.23 -17.55 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589126_12360594.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -30.892 kcal (2) G-P(sol) polarization free energy of solvation -18.772 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -49.664 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.225 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.547 kcal (6) G-S(sol) free energy of system = (1) + (5) -48.439 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds