Wall clock time and date at job start Sun Mar 7 2021 02:05:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.53006 * 109.46974 * 2 1 4 4 C 1.52999 * 109.47269 * 119.99846 * 2 1 3 5 5 H 1.09000 * 109.47486 * 300.00335 * 4 2 1 6 6 C 1.53006 * 109.46623 * 60.00164 * 4 2 1 7 7 C 1.52999 * 109.46626 * 179.97438 * 6 4 2 8 8 C 1.52997 * 109.47592 * 300.00035 * 7 6 4 9 9 H 1.09000 * 109.47140 * 300.00346 * 8 7 6 10 10 N 1.46500 * 109.47204 * 180.02562 * 8 7 6 11 11 C 1.34773 * 119.99955 * 85.00142 * 10 8 7 12 12 O 1.21568 * 120.00193 * 359.97438 * 11 10 8 13 13 C 1.47706 * 120.00032 * 180.02562 * 11 10 8 14 14 C 1.39800 * 120.15321 * 179.72091 * 13 11 10 15 15 F 1.35097 * 120.08831 * 359.97438 * 14 13 11 16 16 C 1.38314 * 119.82709 * 179.78456 * 14 13 11 17 17 C 1.38186 * 120.14792 * 0.47390 * 16 14 13 18 18 C 1.50702 * 119.84405 * 179.76038 * 17 16 14 19 19 O 1.42896 * 109.47015 * 255.01733 * 18 17 16 20 20 Si 1.86292 * 109.47176 * 15.02109 * 18 17 16 21 21 C 1.38662 * 120.31057 * 359.77927 * 17 16 14 22 22 F 1.35106 * 119.91214 * 179.97438 * 21 17 16 23 23 C 1.38061 * 120.16592 * 359.97438 * 21 17 16 24 24 C 1.52996 * 109.47165 * 60.00300 * 8 7 6 25 25 C 1.52997 * 109.47269 * 180.02562 * 4 2 1 26 26 H 1.09002 * 109.47497 * 179.97438 * 1 2 3 27 27 H 1.09000 * 109.47140 * 299.99606 * 1 2 3 28 28 H 1.09001 * 109.47375 * 59.99624 * 1 2 3 29 29 H 1.09000 * 109.47140 * 240.00393 * 2 1 3 30 30 H 1.08996 * 109.47261 * 179.97438 * 3 2 1 31 31 H 1.09001 * 109.47377 * 300.00375 * 3 2 1 32 32 H 1.09000 * 109.46866 * 60.00225 * 3 2 1 33 33 H 1.08993 * 109.46955 * 300.00075 * 6 4 2 34 34 H 1.09000 * 109.47050 * 59.99904 * 6 4 2 35 35 H 1.09000 * 109.47160 * 60.00369 * 7 6 4 36 36 H 1.09002 * 109.46719 * 180.02562 * 7 6 4 37 37 H 0.97001 * 119.99882 * 265.00024 * 10 8 7 38 38 H 1.08002 * 119.92847 * 180.22644 * 16 14 13 39 39 H 1.08998 * 109.47045 * 135.02203 * 18 17 16 40 40 H 0.96704 * 113.99907 * 60.00260 * 19 18 17 41 41 H 1.48497 * 110.00285 * 180.02562 * 20 18 17 42 42 H 1.48507 * 110.00128 * 301.31858 * 20 18 17 43 43 H 1.08002 * 120.06987 * 180.02562 * 23 21 17 44 44 H 1.08992 * 109.47534 * 180.02562 * 24 8 7 45 45 H 1.08996 * 109.47134 * 59.99508 * 24 8 7 46 46 H 1.09000 * 109.47140 * 300.00547 * 25 4 2 47 47 H 1.09001 * 109.47230 * 59.99691 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4426 0.0000 4 6 2.0400 -0.7212 1.2492 5 1 1.6767 -0.2074 2.1393 6 6 1.5300 -2.1638 1.2492 7 6 2.0405 -2.8851 2.4981 8 6 3.5705 -2.8851 2.4975 9 1 3.9335 -3.3988 1.6073 10 7 4.0593 -3.5764 3.6931 11 6 4.1880 -4.9180 3.6905 12 8 3.8981 -5.5545 2.6962 13 6 4.6803 -5.6151 4.8961 14 6 4.8095 -7.0071 4.8988 15 9 4.4839 -7.7197 3.7982 16 6 5.2754 -7.6525 6.0300 17 6 5.6033 -6.9254 7.1584 18 6 6.1051 -7.6362 8.3889 19 8 5.0700 -7.6726 9.3733 20 14 6.5995 -9.3761 7.9428 21 6 5.4724 -5.5450 7.1640 22 9 5.7948 -4.8422 8.2719 23 6 5.0134 -4.8871 6.0404 24 6 4.0805 -1.4427 2.4976 25 6 3.5700 -0.7206 1.2496 26 1 -0.3634 -1.0277 -0.0005 27 1 -0.3633 0.5138 0.8900 28 1 -0.3634 0.5139 -0.8899 29 1 1.8933 -0.5138 -0.8900 30 1 3.1299 1.4426 0.0005 31 1 1.6766 1.9565 -0.8899 32 1 1.6766 1.9563 0.8900 33 1 0.4400 -2.1637 1.2491 34 1 1.8933 -2.6775 0.3591 35 1 1.6775 -2.3715 3.3883 36 1 1.6776 -3.9130 2.4978 37 1 4.2903 -3.0686 4.4866 38 1 5.3794 -8.7275 6.0326 39 1 6.9684 -7.1044 8.7890 40 1 4.2692 -8.1318 9.0852 41 1 7.0957 -10.0879 9.1479 42 1 5.4391 -10.1019 7.3666 43 1 4.9125 -3.8118 6.0463 44 1 5.1704 -1.4426 2.4968 45 1 3.7174 -0.9290 3.3877 46 1 3.9337 -1.2341 0.3595 47 1 3.9330 0.3072 1.2497 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14589126_12360598.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:05:01 Heat of formation + Delta-G solvation = -148.730682 kcal Electronic energy + Delta-G solvation = -29981.908857 eV Core-core repulsion = 25573.283790 eV Total energy + Delta-G solvation = -4408.625066 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 340.164 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -50.10038 -49.98621 -41.51035 -40.42184 -39.54497 -37.82408 -36.72785 -34.46809 -33.16327 -32.00130 -31.41607 -29.68817 -28.09632 -27.70697 -24.56653 -24.46642 -23.55194 -23.26586 -21.72242 -21.32513 -20.70070 -19.67487 -18.86079 -18.64360 -17.95692 -17.34948 -17.21845 -16.98068 -16.52871 -16.37640 -16.25264 -15.99201 -15.78568 -15.61325 -15.44528 -15.22835 -15.19637 -14.76158 -14.55528 -14.41827 -14.26214 -14.16663 -13.78214 -13.46539 -13.23091 -13.15998 -13.01574 -12.85988 -12.72552 -12.46116 -12.34205 -12.17310 -12.12151 -11.96571 -11.69582 -11.40218 -11.29420 -11.05238 -10.94536 -10.83398 -10.64293 -10.13119 -9.82559 -5.12875 -0.83577 -0.36245 1.01769 1.39162 1.43130 1.79327 1.86440 2.26867 2.75524 2.80288 3.02667 3.11226 3.34034 3.44760 3.58178 3.60698 3.67383 3.73970 3.93002 4.03575 4.06565 4.22339 4.24781 4.25970 4.29253 4.31741 4.41343 4.46419 4.49833 4.56536 4.60196 4.61950 4.68556 4.72556 4.74394 4.90340 4.94334 4.95904 5.01497 5.06814 5.10848 5.13195 5.20917 5.29494 5.30689 5.33821 5.41765 5.47228 5.54995 6.17502 6.29876 7.03700 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C -0.093 4.093 3 C -0.151 4.151 4 C -0.084 4.084 5 H 0.071 0.929 6 C -0.114 4.114 7 C -0.129 4.129 8 C 0.146 3.854 9 H 0.092 0.908 10 N -0.720 5.720 11 C 0.560 3.440 12 O -0.513 6.513 13 C -0.140 4.140 14 C 0.159 3.841 15 F -0.104 7.104 16 C -0.139 4.139 17 C -0.098 4.098 18 C -0.079 4.079 19 O -0.520 6.520 20 Si 0.696 3.304 21 C 0.111 3.889 22 F -0.121 7.121 23 C -0.094 4.094 24 C -0.127 4.127 25 C -0.113 4.113 26 H 0.058 0.942 27 H 0.054 0.946 28 H 0.053 0.947 29 H 0.070 0.930 30 H 0.057 0.943 31 H 0.053 0.947 32 H 0.054 0.946 33 H 0.070 0.930 34 H 0.065 0.935 35 H 0.064 0.936 36 H 0.068 0.932 37 H 0.399 0.601 38 H 0.158 0.842 39 H 0.127 0.873 40 H 0.378 0.622 41 H -0.249 1.249 42 H -0.254 1.254 43 H 0.151 0.849 44 H 0.070 0.930 45 H 0.069 0.931 46 H 0.066 0.934 47 H 0.073 0.927 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.669 2.697 0.308 3.187 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.208 4.208 2 C -0.111 4.111 3 C -0.208 4.208 4 C -0.102 4.102 5 H 0.089 0.911 6 C -0.152 4.152 7 C -0.168 4.168 8 C 0.042 3.958 9 H 0.110 0.890 10 N -0.372 5.372 11 C 0.345 3.655 12 O -0.388 6.388 13 C -0.145 4.145 14 C 0.139 3.861 15 F -0.082 7.082 16 C -0.158 4.158 17 C -0.100 4.100 18 C -0.189 4.189 19 O -0.326 6.326 20 Si 0.596 3.404 21 C 0.091 3.909 22 F -0.099 7.099 23 C -0.114 4.114 24 C -0.165 4.165 25 C -0.151 4.151 26 H 0.077 0.923 27 H 0.073 0.927 28 H 0.073 0.927 29 H 0.088 0.912 30 H 0.076 0.924 31 H 0.073 0.927 32 H 0.073 0.927 33 H 0.088 0.912 34 H 0.084 0.916 35 H 0.083 0.917 36 H 0.087 0.913 37 H 0.234 0.766 38 H 0.175 0.825 39 H 0.145 0.855 40 H 0.226 0.774 41 H -0.173 1.173 42 H -0.179 1.179 43 H 0.169 0.831 44 H 0.089 0.911 45 H 0.087 0.913 46 H 0.085 0.915 47 H 0.091 0.909 Dipole moment (debyes) X Y Z Total from point charges 1.759 1.721 0.055 2.461 hybrid contribution -1.060 0.520 0.821 1.438 sum 0.699 2.240 0.876 2.505 Atomic orbital electron populations 1.21909 0.95219 1.01921 1.01774 1.21142 0.95811 0.96157 0.97996 1.21911 1.01151 0.95921 1.01804 1.21257 0.94972 0.95700 0.98301 0.91057 1.21614 1.00908 0.94897 0.97745 1.21925 0.94656 1.01384 0.98831 1.21097 0.94142 0.92518 0.88034 0.89005 1.45986 1.67441 1.06399 1.17379 1.17828 0.78314 0.82460 0.86855 1.90890 1.48690 1.65715 1.33545 1.19915 1.06232 0.92611 0.95692 1.17492 0.96748 0.88034 0.83868 1.91655 1.89022 1.77233 1.50321 1.21072 1.01564 1.01806 0.91354 1.20420 1.00035 0.92654 0.96847 1.25109 0.94121 1.11596 0.88051 1.86689 1.27114 1.79160 1.39627 0.94734 0.87057 0.73593 0.84998 1.17218 1.00942 0.88917 0.83775 1.91587 1.89952 1.78173 1.50184 1.21181 0.98292 1.01103 0.90779 1.21811 1.01040 0.93979 0.99638 1.21594 0.95381 1.00728 0.97372 0.92344 0.92738 0.92749 0.91174 0.92379 0.92743 0.92735 0.91157 0.91598 0.91731 0.91324 0.76556 0.82455 0.85498 0.77405 1.17296 1.17892 0.83111 0.91107 0.91275 0.91513 0.90889 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.14 8.84 37.16 0.33 0.47 16 2 C -0.09 0.11 2.51 -90.62 -0.23 -0.12 16 3 C -0.15 0.20 8.84 37.16 0.33 0.52 16 4 C -0.08 0.13 1.78 -90.62 -0.16 -0.03 16 5 H 0.07 -0.09 8.14 -51.93 -0.42 -0.52 16 6 C -0.11 0.09 4.85 -26.73 -0.13 -0.04 16 7 C -0.13 0.04 5.49 -26.73 -0.15 -0.11 16 8 C 0.15 -0.09 2.45 -67.93 -0.17 -0.25 16 9 H 0.09 0.13 7.58 -51.93 -0.39 -0.26 16 10 N -0.72 0.65 5.03 -54.80 -0.28 0.37 16 11 C 0.56 1.13 7.73 -12.39 -0.10 1.03 16 12 O -0.51 -3.05 15.00 5.31 0.08 -2.97 16 13 C -0.14 -0.07 5.88 -104.92 -0.62 -0.68 16 14 C 0.16 0.18 7.28 -38.97 -0.28 -0.10 16 15 F -0.10 -0.38 15.55 2.25 0.04 -0.35 16 16 C -0.14 0.14 8.62 -39.57 -0.34 -0.20 16 17 C -0.10 0.11 5.27 -104.48 -0.55 -0.45 16 18 C -0.08 0.11 2.44 36.01 0.09 0.20 16 19 O -0.52 -0.10 12.88 -35.23 -0.45 -0.55 16 20 Si 0.70 -1.62 30.24 -169.99 -5.14 -6.76 16 21 C 0.11 -0.06 7.23 -39.49 -0.29 -0.34 16 22 F -0.12 -0.11 16.73 2.25 0.04 -0.07 16 23 C -0.09 0.15 9.51 -39.12 -0.37 -0.23 16 24 C -0.13 0.30 5.39 -26.75 -0.14 0.15 16 25 C -0.11 0.22 4.85 -26.75 -0.13 0.09 16 26 H 0.06 -0.05 6.43 -51.93 -0.33 -0.39 16 27 H 0.05 -0.05 8.14 -51.93 -0.42 -0.47 16 28 H 0.05 -0.04 8.14 -51.93 -0.42 -0.46 16 29 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 30 H 0.06 -0.09 6.43 -51.93 -0.33 -0.43 16 31 H 0.05 -0.05 8.14 -51.93 -0.42 -0.48 16 32 H 0.05 -0.06 8.14 -51.93 -0.42 -0.49 16 33 H 0.07 -0.05 6.43 -51.93 -0.33 -0.39 16 34 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 35 H 0.06 -0.05 8.14 -51.93 -0.42 -0.47 16 36 H 0.07 0.12 8.14 -51.93 -0.42 -0.30 16 37 H 0.40 -1.44 6.64 -40.82 -0.27 -1.71 16 38 H 0.16 -0.39 4.83 -52.49 -0.25 -0.64 16 39 H 0.13 -0.23 7.89 -51.93 -0.41 -0.64 16 40 H 0.38 -1.12 8.70 45.56 0.40 -0.73 16 41 H -0.25 -0.23 7.11 56.52 0.40 0.17 16 42 H -0.25 0.22 6.68 56.52 0.38 0.59 16 43 H 0.15 -0.65 6.41 -52.49 -0.34 -0.98 16 44 H 0.07 -0.18 8.14 -51.93 -0.42 -0.60 16 45 H 0.07 -0.21 8.14 -51.93 -0.42 -0.63 16 46 H 0.07 -0.09 8.14 -51.93 -0.42 -0.52 16 47 H 0.07 -0.16 6.43 -51.93 -0.33 -0.50 16 LS Contribution 373.64 15.07 5.63 5.63 Total: 0.00 -6.63 373.64 -9.89 -16.52 By element: Atomic # 1 Polarization: -4.84 SS G_CDS: -6.90 Total: -11.74 kcal Atomic # 6 Polarization: 2.82 SS G_CDS: -2.91 Total: -0.08 kcal Atomic # 7 Polarization: 0.65 SS G_CDS: -0.28 Total: 0.37 kcal Atomic # 8 Polarization: -3.15 SS G_CDS: -0.37 Total: -3.53 kcal Atomic # 9 Polarization: -0.49 SS G_CDS: 0.07 Total: -0.42 kcal Atomic # 14 Polarization: -1.62 SS G_CDS: -5.14 Total: -6.76 kcal Total LS contribution 5.63 Total: 5.63 kcal Total: -6.63 -9.89 -16.52 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589126_12360598.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -132.207 kcal (2) G-P(sol) polarization free energy of solvation -6.633 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -138.841 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.890 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.523 kcal (6) G-S(sol) free energy of system = (1) + (5) -148.731 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds