Wall clock time and date at job start Sun Mar 7 2021 02:05:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35650 * 117.00165 * 2 1 4 4 C 1.40145 * 120.14938 * 180.02562 * 3 2 1 5 5 C 1.47538 * 120.18909 * 359.75074 * 4 3 2 6 6 O 1.21588 * 120.00157 * 359.97438 * 5 4 3 7 7 N 1.34779 * 119.99895 * 179.97438 * 5 4 3 8 8 C 1.46495 * 119.99995 * 179.97438 * 7 5 4 9 9 H 1.08996 * 109.47203 * 35.00627 * 8 7 5 10 10 C 1.53007 * 109.46911 * 154.99906 * 8 7 5 11 11 C 1.53005 * 109.47111 * 180.02562 * 10 8 7 12 12 C 1.52999 * 109.47020 * 300.00392 * 11 10 8 13 13 H 1.09001 * 109.47227 * 299.99691 * 12 11 10 14 14 C 1.53005 * 109.47020 * 179.97438 * 12 11 10 15 15 C 1.52994 * 109.47086 * 59.99820 * 14 12 11 16 16 C 1.52999 * 109.47020 * 179.97438 * 14 12 11 17 17 C 1.53003 * 109.47180 * 59.99979 * 12 11 10 18 18 C 1.53000 * 109.47436 * 274.99973 * 8 7 5 19 19 C 1.39707 * 119.61775 * 180.02562 * 4 3 2 20 20 C 1.37787 * 119.90550 * 0.04426 * 19 4 3 21 21 C 1.50695 * 119.84848 * 179.97438 * 20 19 4 22 22 O 1.42903 * 109.47170 * 65.00157 * 21 20 19 23 23 Si 1.86303 * 109.47224 * 184.99963 * 21 20 19 24 24 C 1.38549 * 120.30350 * 359.93287 * 20 19 4 25 25 C 1.38054 * 120.38764 * 0.04676 * 24 20 19 26 26 H 1.08998 * 109.47402 * 180.02562 * 1 2 3 27 27 H 1.09003 * 109.46904 * 300.00213 * 1 2 3 28 28 H 1.09001 * 109.47531 * 59.99291 * 1 2 3 29 29 H 0.96998 * 120.00125 * 359.97438 * 7 5 4 30 30 H 1.08993 * 109.47131 * 300.00233 * 10 8 7 31 31 H 1.09001 * 109.47008 * 60.00551 * 10 8 7 32 32 H 1.09001 * 109.46868 * 60.00302 * 11 10 8 33 33 H 1.08992 * 109.46948 * 180.02562 * 11 10 8 34 34 H 1.09001 * 109.46868 * 299.99910 * 14 12 11 35 35 H 1.09008 * 109.47142 * 59.99878 * 15 14 12 36 36 H 1.08994 * 109.47281 * 179.97438 * 15 14 12 37 37 H 1.09004 * 109.47555 * 300.00301 * 15 14 12 38 38 H 1.09002 * 109.47070 * 179.97438 * 16 14 12 39 39 H 1.09001 * 109.47227 * 299.99691 * 16 14 12 40 40 H 1.09001 * 109.47270 * 60.00056 * 16 14 12 41 41 H 1.08991 * 109.47191 * 60.00261 * 17 12 11 42 42 H 1.09002 * 109.46862 * 180.02562 * 17 12 11 43 43 H 1.08991 * 109.47036 * 300.00358 * 18 8 7 44 44 H 1.09001 * 109.46897 * 60.00275 * 18 8 7 45 45 H 1.07993 * 120.04459 * 179.97438 * 19 4 3 46 46 H 1.08998 * 109.47465 * 304.99938 * 21 20 19 47 47 H 0.96699 * 113.99961 * 180.02562 * 22 21 20 48 48 H 1.48507 * 110.00138 * 178.67957 * 23 21 20 49 49 H 1.48494 * 110.00111 * 299.99755 * 23 21 20 50 50 H 1.08003 * 119.80707 * 180.02562 * 24 20 19 51 51 H 1.07999 * 119.95662 * 179.97438 * 25 24 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0449 1.2086 0.0000 4 6 3.4442 1.2856 -0.0005 5 6 4.2550 0.0530 0.0044 6 8 3.7094 -1.0336 0.0095 7 7 5.6005 0.1315 0.0034 8 6 6.4056 -1.0924 0.0089 9 1 5.9018 -1.8614 -0.5767 10 6 7.7778 -0.8029 -0.6029 11 6 8.6185 -2.0813 -0.5978 12 6 8.7945 -2.5701 0.8413 13 1 9.2986 -1.8015 1.4271 14 6 9.6346 -3.8489 0.8464 15 6 11.0068 -3.5600 0.2345 16 6 9.8111 -4.3374 2.2855 17 6 7.4223 -2.8597 1.4530 18 6 6.5816 -1.5807 1.4481 19 6 4.0669 2.5362 0.0000 20 6 3.3039 3.6835 0.0020 21 6 3.9769 5.0318 0.0032 22 8 4.6982 5.2053 -1.2182 23 14 2.6889 6.3688 0.1589 24 6 1.9207 3.6033 0.0021 25 6 1.2926 2.3739 0.0011 26 1 -0.3634 -1.0276 0.0005 27 1 -0.3633 0.5139 0.8900 28 1 -0.3634 0.5139 -0.8899 29 1 6.0358 0.9983 -0.0010 30 1 7.6524 -0.4551 -1.6282 31 1 8.2817 -0.0339 -0.0174 32 1 8.1144 -2.8500 -1.1836 33 1 9.5962 -1.8749 -1.0331 34 1 9.1301 -4.6174 0.2607 35 1 11.5113 -2.7914 0.8202 36 1 11.6055 -4.4708 0.2385 37 1 10.8815 -3.2116 -0.7908 38 1 10.4093 -5.2486 2.2891 39 1 10.3159 -3.5687 2.8708 40 1 8.8337 -4.5431 2.7219 41 1 6.9183 -3.6283 0.8673 42 1 7.5477 -3.2075 2.4784 43 1 7.0855 -0.8117 2.0336 44 1 5.6040 -1.7870 1.8839 45 1 5.1447 2.6035 0.0000 46 1 4.6672 5.0927 0.8445 47 1 5.1579 6.0533 -1.2865 48 1 3.3421 7.7020 0.1933 49 1 1.7415 6.2968 -0.9824 50 1 1.3305 4.5077 0.0032 51 1 0.2139 2.3195 0.0016 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14589126_12496546.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:05:05 Heat of formation + Delta-G solvation = -96.041643 kcal Electronic energy + Delta-G solvation = -29592.304034 eV Core-core repulsion = 25650.651876 eV Total energy + Delta-G solvation = -3941.652158 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 334.198 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -41.69921 -40.62497 -39.34598 -39.08956 -37.33242 -36.50846 -34.12796 -32.54648 -31.92102 -31.88099 -29.39664 -28.48295 -28.03475 -26.14907 -25.30601 -23.73661 -23.43350 -22.33562 -21.27067 -21.00881 -20.57231 -19.37761 -18.62648 -18.04779 -17.72746 -16.96022 -16.74803 -16.37621 -16.09855 -15.81803 -15.72449 -15.54123 -15.28769 -15.10801 -14.78702 -14.59649 -14.43527 -14.26740 -14.13696 -14.03393 -13.86638 -13.49646 -13.33797 -13.09868 -13.01058 -12.74065 -12.62563 -12.50849 -12.37017 -12.22557 -12.07436 -12.02424 -11.99930 -11.74260 -11.60188 -11.31773 -11.11801 -10.90187 -10.68329 -10.45270 -10.15326 -9.83723 -9.21709 -5.04491 -0.17686 0.25101 1.19844 1.51477 1.87214 1.94899 2.24221 2.28047 2.76976 3.25859 3.57467 3.61409 3.70032 3.70593 3.77085 3.83225 4.02111 4.04836 4.13092 4.16773 4.22094 4.24569 4.26693 4.33542 4.34983 4.42692 4.48430 4.55282 4.58327 4.61561 4.65926 4.68236 4.72021 4.79860 4.82983 4.93257 4.98923 5.01012 5.05204 5.10134 5.11992 5.18935 5.21366 5.22931 5.31351 5.31907 5.38969 5.41333 5.54082 5.54551 5.61822 5.68350 6.33634 6.37063 6.66651 7.45067 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.019 3.981 2 O -0.279 6.279 3 C 0.192 3.808 4 C -0.174 4.174 5 C 0.562 3.438 6 O -0.516 6.516 7 N -0.728 5.728 8 C 0.148 3.852 9 H 0.088 0.912 10 C -0.126 4.126 11 C -0.112 4.112 12 C -0.084 4.084 13 H 0.071 0.929 14 C -0.093 4.093 15 C -0.150 4.150 16 C -0.151 4.151 17 C -0.113 4.113 18 C -0.128 4.128 19 C -0.019 4.019 20 C -0.122 4.122 21 C -0.070 4.070 22 O -0.536 6.536 23 Si 0.681 3.319 24 C -0.046 4.046 25 C -0.214 4.214 26 H 0.105 0.895 27 H 0.059 0.941 28 H 0.058 0.942 29 H 0.396 0.604 30 H 0.069 0.931 31 H 0.067 0.933 32 H 0.065 0.935 33 H 0.071 0.929 34 H 0.070 0.930 35 H 0.053 0.947 36 H 0.053 0.947 37 H 0.057 0.943 38 H 0.053 0.947 39 H 0.053 0.947 40 H 0.058 0.942 41 H 0.064 0.936 42 H 0.068 0.932 43 H 0.062 0.938 44 H 0.068 0.932 45 H 0.133 0.867 46 H 0.077 0.923 47 H 0.380 0.620 48 H -0.260 1.260 49 H -0.255 1.255 50 H 0.134 0.866 51 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.464 3.756 2.530 4.552 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.189 6.189 3 C 0.143 3.857 4 C -0.178 4.178 5 C 0.350 3.650 6 O -0.391 6.391 7 N -0.381 5.381 8 C 0.044 3.956 9 H 0.107 0.893 10 C -0.164 4.164 11 C -0.150 4.150 12 C -0.102 4.102 13 H 0.089 0.911 14 C -0.111 4.111 15 C -0.208 4.208 16 C -0.208 4.208 17 C -0.151 4.151 18 C -0.167 4.167 19 C -0.038 4.038 20 C -0.122 4.122 21 C -0.180 4.180 22 O -0.344 6.344 23 Si 0.582 3.418 24 C -0.064 4.064 25 C -0.232 4.232 26 H 0.123 0.877 27 H 0.077 0.923 28 H 0.076 0.924 29 H 0.232 0.768 30 H 0.087 0.913 31 H 0.086 0.914 32 H 0.084 0.916 33 H 0.089 0.911 34 H 0.088 0.912 35 H 0.072 0.928 36 H 0.072 0.928 37 H 0.076 0.924 38 H 0.072 0.928 39 H 0.072 0.928 40 H 0.077 0.923 41 H 0.083 0.917 42 H 0.087 0.913 43 H 0.081 0.919 44 H 0.087 0.913 45 H 0.151 0.849 46 H 0.095 0.905 47 H 0.228 0.772 48 H -0.185 1.185 49 H -0.179 1.179 50 H 0.151 0.849 51 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -0.466 2.852 2.050 3.543 hybrid contribution 0.938 1.045 -0.677 1.559 sum 0.472 3.897 1.373 4.159 Atomic orbital electron populations 1.23231 0.78265 1.04702 1.01441 1.86380 1.21132 1.25180 1.86217 1.19082 0.90944 0.85037 0.90588 1.19341 0.90920 0.93903 1.13668 1.17934 0.81916 0.88604 0.76587 1.90838 1.71500 1.28549 1.48244 1.45999 1.05877 1.09744 1.76437 1.20994 0.90833 0.86881 0.96918 0.89345 1.21815 0.94561 0.98835 1.01234 1.21598 0.99899 0.96647 0.96894 1.21255 0.95601 0.97161 0.96178 0.91100 1.21143 0.95988 0.97135 0.96849 1.21908 0.96477 1.01553 1.00828 1.21907 1.01791 1.00975 0.96113 1.21621 0.94842 0.97265 1.01406 1.21924 1.00654 0.97752 0.96350 1.20939 0.99757 0.89910 0.93156 1.19000 0.93040 0.93670 1.06523 1.24702 1.02541 1.01632 0.89098 1.86597 1.68275 1.41427 1.38094 0.95092 0.80874 0.76538 0.89295 1.20968 0.93593 0.97496 0.94334 1.21200 1.00721 0.91460 1.09850 0.87708 0.92257 0.92378 0.76850 0.91273 0.91409 0.91590 0.91053 0.91205 0.92753 0.92794 0.92391 0.92800 0.92751 0.92333 0.91685 0.91293 0.91882 0.91349 0.84882 0.90506 0.77185 1.18517 1.17930 0.84865 0.84089 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.01 9.81 101.05 0.99 0.99 16 2 O -0.28 -1.17 8.57 -40.53 -0.35 -1.52 16 3 C 0.19 0.62 6.70 -38.69 -0.26 0.36 16 4 C -0.17 -0.55 5.89 -104.84 -0.62 -1.17 16 5 C 0.56 2.51 7.73 -12.47 -0.10 2.41 16 6 O -0.52 -4.18 14.82 -16.59 -0.25 -4.42 16 7 N -0.73 -0.98 5.03 -54.85 -0.28 -1.25 16 8 C 0.15 0.17 2.45 -67.93 -0.17 0.00 16 9 H 0.09 0.30 7.58 -51.93 -0.39 -0.10 16 10 C -0.13 0.09 5.39 -26.72 -0.14 -0.05 16 11 C -0.11 0.09 4.85 -26.73 -0.13 -0.04 16 12 C -0.08 0.05 1.78 -90.62 -0.16 -0.11 16 13 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 14 C -0.09 0.04 2.51 -90.62 -0.23 -0.19 16 15 C -0.15 0.09 8.84 37.15 0.33 0.42 16 16 C -0.15 0.05 8.84 37.16 0.33 0.38 16 17 C -0.11 -0.03 4.85 -26.70 -0.13 -0.16 16 18 C -0.13 -0.13 5.50 -26.71 -0.15 -0.28 16 19 C -0.02 -0.02 9.16 -39.20 -0.36 -0.38 16 20 C -0.12 -0.07 5.38 -104.67 -0.56 -0.63 16 21 C -0.07 0.08 2.78 36.00 0.10 0.18 16 22 O -0.54 -0.06 12.81 -35.23 -0.45 -0.51 16 23 Si 0.68 -1.16 29.84 -169.99 -5.07 -6.24 16 24 C -0.05 0.00 8.65 -39.53 -0.34 -0.35 16 25 C -0.21 -0.14 9.03 -39.48 -0.36 -0.50 16 26 H 0.10 -0.13 8.14 -51.93 -0.42 -0.55 16 27 H 0.06 -0.12 7.66 -51.93 -0.40 -0.51 16 28 H 0.06 -0.09 7.66 -51.93 -0.40 -0.49 16 29 H 0.40 -0.43 6.63 -40.82 -0.27 -0.70 16 30 H 0.07 -0.04 8.14 -51.93 -0.42 -0.47 16 31 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 32 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 33 H 0.07 -0.08 6.43 -51.93 -0.33 -0.42 16 34 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 35 H 0.05 -0.03 8.14 -51.92 -0.42 -0.45 16 36 H 0.05 -0.02 8.14 -51.93 -0.42 -0.45 16 37 H 0.06 -0.05 6.43 -51.93 -0.33 -0.38 16 38 H 0.05 -0.01 8.14 -51.93 -0.42 -0.44 16 39 H 0.05 -0.02 8.14 -51.93 -0.42 -0.44 16 40 H 0.06 -0.02 6.43 -51.93 -0.33 -0.35 16 41 H 0.06 0.06 8.14 -51.93 -0.42 -0.36 16 42 H 0.07 0.01 6.43 -51.93 -0.33 -0.33 16 43 H 0.06 0.03 8.14 -51.93 -0.42 -0.39 16 44 H 0.07 0.22 8.14 -51.93 -0.42 -0.20 16 45 H 0.13 -0.15 6.40 -52.49 -0.34 -0.49 16 46 H 0.08 -0.23 7.96 -51.93 -0.41 -0.64 16 47 H 0.38 -1.42 8.74 45.56 0.40 -1.02 16 48 H -0.26 -0.10 7.11 56.52 0.40 0.30 16 49 H -0.25 -0.34 7.04 56.52 0.40 0.05 16 50 H 0.13 -0.26 4.84 -52.48 -0.25 -0.51 16 51 H 0.14 -0.25 6.30 -52.49 -0.33 -0.58 16 LS Contribution 390.69 15.07 5.89 5.89 Total: 0.00 -8.04 390.69 -10.88 -18.92 By element: Atomic # 1 Polarization: -3.33 SS G_CDS: -8.43 Total: -11.75 kcal Atomic # 6 Polarization: 2.84 SS G_CDS: -1.95 Total: 0.89 kcal Atomic # 7 Polarization: -0.98 SS G_CDS: -0.28 Total: -1.25 kcal Atomic # 8 Polarization: -5.41 SS G_CDS: -1.04 Total: -6.45 kcal Atomic # 14 Polarization: -1.16 SS G_CDS: -5.07 Total: -6.24 kcal Total LS contribution 5.89 Total: 5.89 kcal Total: -8.04 -10.88 -18.92 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589126_12496546.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -77.124 kcal (2) G-P(sol) polarization free energy of solvation -8.036 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -85.160 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.882 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.918 kcal (6) G-S(sol) free energy of system = (1) + (5) -96.042 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds