Wall clock time and date at job start Sun Mar 7 2021 02:05:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 C 1.53000 * 109.47233 * 2 1 4 4 C 1.52997 * 109.46817 * 240.00194 * 2 1 3 5 5 H 1.09002 * 109.47153 * 60.00231 * 4 2 1 6 6 C 1.52999 * 109.47317 * 179.97438 * 4 2 1 7 7 C 1.53002 * 109.47628 * 180.02562 * 6 4 2 8 8 C 1.53000 * 109.46806 * 300.00074 * 7 6 4 9 9 H 1.08992 * 109.47399 * 299.99952 * 8 7 6 10 10 N 1.46499 * 109.46840 * 179.97438 * 8 7 6 11 11 C 1.34781 * 119.99874 * 85.00543 * 10 8 7 12 12 O 1.21640 * 119.99805 * 359.97438 * 11 10 8 13 13 C 1.47057 * 119.99843 * 179.97438 * 11 10 8 14 14 C 1.35863 * 125.42673 * 179.69451 * 13 11 10 15 15 C 1.41588 * 107.73224 * 179.84726 * 14 13 11 16 16 C 1.40063 * 133.38626 * 180.11230 * 15 14 13 17 17 C 1.36473 * 119.83200 * 180.32586 * 16 15 14 18 18 C 1.38891 * 120.61533 * 359.97438 * 17 16 15 19 19 C 1.50703 * 119.67770 * 179.97438 * 18 17 16 20 20 O 1.42897 * 109.47425 * 120.00121 * 19 18 17 21 21 Si 1.86305 * 109.46960 * 359.97438 * 19 18 17 22 22 C 1.37709 * 120.65136 * 0.02562 * 18 17 16 23 23 C 1.39194 * 119.80726 * 359.97438 * 22 18 17 24 24 N 1.37487 * 133.18428 * 179.97438 * 23 22 18 25 25 C 1.53002 * 109.46911 * 59.99917 * 8 7 6 26 26 C 1.52992 * 109.47482 * 300.00014 * 4 2 1 27 27 H 1.09002 * 109.47075 * 59.99068 * 1 2 3 28 28 H 1.08996 * 109.47407 * 180.02562 * 1 2 3 29 29 H 1.09000 * 109.46986 * 299.99797 * 1 2 3 30 30 H 1.09002 * 109.47070 * 120.00374 * 2 1 3 31 31 H 1.08992 * 109.47399 * 300.00166 * 3 2 1 32 32 H 1.09004 * 109.46724 * 60.00652 * 3 2 1 33 33 H 1.09001 * 109.47194 * 179.97438 * 3 2 1 34 34 H 1.09001 * 109.47362 * 300.00732 * 6 4 2 35 35 H 1.09002 * 109.46716 * 60.00091 * 6 4 2 36 36 H 1.09001 * 109.47142 * 180.02562 * 7 6 4 37 37 H 1.09002 * 109.46838 * 59.99718 * 7 6 4 38 38 H 0.97002 * 120.00410 * 264.99761 * 10 8 7 39 39 H 1.08007 * 126.13549 * 359.97438 * 14 13 11 40 40 H 1.08003 * 120.08137 * 0.30292 * 16 15 14 41 41 H 1.08001 * 119.69314 * 180.02562 * 17 16 15 42 42 H 1.09004 * 109.47293 * 240.00516 * 19 18 17 43 43 H 0.96698 * 114.00169 * 299.99633 * 20 19 18 44 44 H 1.48499 * 110.00146 * 180.02562 * 21 19 18 45 45 H 1.48500 * 109.99991 * 301.32592 * 21 19 18 46 46 H 1.08004 * 120.09936 * 179.97438 * 22 18 17 47 47 H 0.96995 * 125.60651 * 359.97438 * 24 23 22 48 48 H 1.09004 * 109.46930 * 179.97438 * 25 8 7 49 49 H 1.09002 * 109.47067 * 59.99825 * 25 8 7 50 50 H 1.09002 * 109.47103 * 300.00247 * 26 4 2 51 51 H 1.09001 * 109.47066 * 60.00169 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4425 0.0000 4 6 2.0399 -0.7212 -1.2493 5 1 1.6766 -0.2073 -2.1392 6 6 3.5699 -0.7207 -1.2497 7 6 4.0799 -1.4414 -2.4993 8 6 3.5704 -2.8840 -2.4996 9 1 3.9341 -3.3980 -1.6100 10 7 4.0582 -3.5739 -3.6964 11 6 5.2804 -4.1421 -3.6956 12 8 5.9785 -4.0817 -2.7013 13 6 5.7698 -4.8351 -4.8968 14 6 6.9808 -5.4389 -5.0192 15 6 7.0595 -5.9872 -6.3222 16 6 8.0466 -6.7103 -7.0037 17 6 7.8296 -7.1081 -8.2911 18 6 6.6370 -6.8031 -8.9342 19 6 6.4200 -7.2524 -10.3563 20 8 5.2773 -8.1083 -10.4164 21 14 7.9228 -8.1792 -10.9508 22 6 5.6512 -6.0933 -8.2856 23 6 5.8488 -5.6765 -6.9723 24 7 5.0739 -4.9708 -6.0825 25 6 2.0404 -2.8845 -2.4993 26 6 1.5300 -2.1636 -1.2494 27 1 -0.3633 0.5140 -0.8899 28 1 -0.3634 -1.0276 0.0005 29 1 -0.3633 0.5138 0.8900 30 1 1.8934 -0.5139 0.8900 31 1 1.6768 1.9563 -0.8899 32 1 1.6768 1.9562 0.8901 33 1 3.1301 1.4425 0.0005 34 1 3.9330 0.3071 -1.2498 35 1 3.9336 -1.2344 -0.3597 36 1 5.1699 -1.4414 -2.4993 37 1 3.7162 -0.9274 -3.3890 38 1 3.5016 -3.6218 -4.4894 39 1 7.7453 -5.4930 -4.2582 40 1 8.9771 -6.9522 -6.5118 41 1 8.5921 -7.6660 -8.8143 42 1 6.2558 -6.3818 -10.9913 43 1 5.3537 -8.9052 -9.8740 44 1 7.7218 -8.6272 -12.3523 45 1 9.1234 -7.3096 -10.8633 46 1 4.7273 -5.8607 -8.7944 47 1 4.1851 -4.6246 -6.2584 48 1 1.6774 -3.9123 -2.4999 49 1 1.6767 -2.3705 -3.3890 50 1 1.8933 -2.6775 -0.3594 51 1 0.4400 -2.1636 -1.2494 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14589126_13158378.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:05:39 Heat of formation + Delta-G solvation = -32.954861 kcal Electronic energy + Delta-G solvation = -29392.483248 eV Core-core repulsion = 25450.370739 eV Total energy + Delta-G solvation = -3942.112510 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 343.193 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -42.69636 -41.06513 -39.78443 -38.91659 -36.91365 -36.76258 -34.25529 -33.25811 -32.02536 -31.27121 -30.40437 -29.57558 -28.11518 -26.86114 -24.79424 -23.70747 -23.57104 -22.86802 -21.97710 -21.42714 -21.05666 -20.68300 -19.50536 -18.42921 -17.85647 -17.44292 -16.79499 -16.57436 -16.26547 -16.14431 -15.64353 -15.51424 -15.38003 -15.33086 -15.08711 -14.86325 -14.72429 -14.57857 -14.48068 -14.39788 -14.23266 -14.06983 -13.48930 -13.18518 -13.15015 -12.88225 -12.77868 -12.60158 -12.53128 -12.37602 -12.20440 -12.15002 -11.97297 -11.72283 -11.65413 -11.43146 -11.37875 -11.09485 -10.96600 -10.93562 -10.46541 -10.18893 -9.32209 -8.82608 -5.01627 -0.33616 0.51670 1.01356 1.28856 1.65008 1.76117 1.93236 1.99694 2.27951 2.77641 3.40739 3.48798 3.56437 3.60136 3.63053 3.69825 3.72488 3.90850 4.00575 4.02053 4.19097 4.22057 4.24117 4.28545 4.28909 4.38822 4.43016 4.44858 4.46931 4.53915 4.56781 4.60608 4.69568 4.72589 4.87149 4.89188 4.92340 4.92776 4.96375 4.98940 5.04265 5.07973 5.10483 5.17575 5.26350 5.28425 5.30160 5.38590 5.41724 5.45045 5.51910 5.53305 5.61116 5.96445 6.19712 6.36119 6.54911 7.01717 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C -0.093 4.093 3 C -0.151 4.151 4 C -0.084 4.084 5 H 0.071 0.929 6 C -0.114 4.114 7 C -0.129 4.129 8 C 0.146 3.854 9 H 0.093 0.907 10 N -0.726 5.726 11 C 0.585 3.415 12 O -0.516 6.516 13 C 0.013 3.987 14 C -0.101 4.101 15 C -0.117 4.117 16 C -0.050 4.050 17 C -0.146 4.146 18 C -0.088 4.088 19 C -0.068 4.068 20 O -0.541 6.541 21 Si 0.693 3.307 22 C -0.104 4.104 23 C 0.115 3.885 24 N -0.578 5.578 25 C -0.127 4.127 26 C -0.113 4.113 27 H 0.053 0.947 28 H 0.057 0.943 29 H 0.054 0.946 30 H 0.070 0.930 31 H 0.053 0.947 32 H 0.054 0.946 33 H 0.058 0.942 34 H 0.070 0.930 35 H 0.066 0.934 36 H 0.069 0.931 37 H 0.063 0.937 38 H 0.395 0.605 39 H 0.158 0.842 40 H 0.132 0.868 41 H 0.129 0.871 42 H 0.114 0.886 43 H 0.380 0.620 44 H -0.256 1.256 45 H -0.257 1.257 46 H 0.127 0.873 47 H 0.417 0.583 48 H 0.069 0.931 49 H 0.067 0.933 50 H 0.067 0.933 51 H 0.072 0.928 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.635 -0.723 -0.094 2.734 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.208 4.208 2 C -0.111 4.111 3 C -0.208 4.208 4 C -0.102 4.102 5 H 0.089 0.911 6 C -0.152 4.152 7 C -0.168 4.168 8 C 0.042 3.958 9 H 0.111 0.889 10 N -0.376 5.376 11 C 0.372 3.628 12 O -0.391 6.391 13 C -0.096 4.096 14 C -0.127 4.127 15 C -0.121 4.121 16 C -0.069 4.069 17 C -0.165 4.165 18 C -0.090 4.090 19 C -0.179 4.179 20 O -0.346 6.346 21 Si 0.595 3.405 22 C -0.125 4.125 23 C 0.005 3.995 24 N -0.183 5.183 25 C -0.165 4.165 26 C -0.151 4.151 27 H 0.073 0.927 28 H 0.076 0.924 29 H 0.073 0.927 30 H 0.089 0.911 31 H 0.073 0.927 32 H 0.073 0.927 33 H 0.077 0.923 34 H 0.089 0.911 35 H 0.084 0.916 36 H 0.088 0.912 37 H 0.082 0.918 38 H 0.228 0.772 39 H 0.176 0.824 40 H 0.150 0.850 41 H 0.147 0.853 42 H 0.131 0.869 43 H 0.227 0.773 44 H -0.181 1.181 45 H -0.182 1.182 46 H 0.145 0.855 47 H 0.255 0.745 48 H 0.088 0.912 49 H 0.086 0.914 50 H 0.085 0.915 51 H 0.091 0.909 Dipole moment (debyes) X Y Z Total from point charges -1.830 -0.154 -0.294 1.860 hybrid contribution -1.102 0.812 -0.460 1.443 sum -2.931 0.658 -0.754 3.097 Atomic orbital electron populations 1.21910 0.95223 1.01838 1.01814 1.21144 0.95746 0.96246 0.97984 1.21908 1.01254 0.95873 1.01781 1.21253 0.95205 0.95449 0.98307 0.91100 1.21617 0.95020 1.00813 0.97730 1.21927 1.01408 0.94638 0.98804 1.21099 0.93886 0.92808 0.87978 0.88935 1.46009 1.17428 1.57000 1.17205 1.17196 0.81507 0.78061 0.86086 1.90878 1.56009 1.59330 1.32896 1.20130 0.94898 1.07489 0.87039 1.20978 0.96118 0.99280 0.96365 1.18226 0.95040 1.04141 0.94709 1.20383 0.97747 0.95154 0.93621 1.20484 0.97161 1.03371 0.95476 1.20031 0.94090 0.98606 0.96305 1.25079 0.99492 0.98067 0.95261 1.86496 1.39938 1.36621 1.71584 0.94550 0.75710 0.87651 0.82603 1.19856 1.00383 1.01071 0.91152 1.18314 0.91786 0.97373 0.92030 1.41896 1.17167 1.48632 1.10631 1.21830 0.93617 1.01396 0.99618 1.21609 1.00942 0.95191 0.97323 0.92743 0.92392 0.92724 0.91147 0.92748 0.92727 0.92329 0.91127 0.91550 0.91247 0.91826 0.77187 0.82400 0.85001 0.85348 0.86890 0.77271 1.18128 1.18211 0.85549 0.74517 0.91188 0.91381 0.91461 0.90898 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.20 8.84 37.16 0.33 0.53 16 2 C -0.09 0.11 2.51 -90.62 -0.23 -0.11 16 3 C -0.15 0.15 8.84 37.16 0.33 0.48 16 4 C -0.08 0.13 1.77 -90.63 -0.16 -0.03 16 5 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 6 C -0.11 0.10 4.85 -26.73 -0.13 -0.03 16 7 C -0.13 0.04 5.49 -26.73 -0.15 -0.11 16 8 C 0.15 -0.09 2.45 -67.93 -0.17 -0.26 16 9 H 0.09 0.13 7.58 -51.93 -0.39 -0.27 16 10 N -0.73 0.64 5.07 -55.00 -0.28 0.36 16 11 C 0.59 1.24 7.76 -12.68 -0.10 1.14 16 12 O -0.52 -2.96 16.50 5.24 0.09 -2.87 16 13 C 0.01 0.02 6.97 -82.29 -0.57 -0.55 16 14 C -0.10 -0.21 10.53 -39.16 -0.41 -0.62 16 15 C -0.12 -0.20 6.16 -106.93 -0.66 -0.86 16 16 C -0.05 -0.01 10.06 -39.53 -0.40 -0.41 16 17 C -0.15 0.05 8.59 -39.98 -0.34 -0.29 16 18 C -0.09 0.00 5.40 -104.57 -0.56 -0.57 16 19 C -0.07 0.04 2.81 36.01 0.10 0.14 16 20 O -0.54 0.10 12.76 -35.23 -0.45 -0.35 16 21 Si 0.69 -0.87 29.75 -169.99 -5.06 -5.93 16 22 C -0.10 -0.05 9.61 -39.42 -0.38 -0.42 16 23 C 0.11 0.12 7.25 -83.97 -0.61 -0.49 16 24 N -0.58 0.32 6.07 -7.35 -0.04 0.28 16 25 C -0.13 0.29 5.39 -26.71 -0.14 0.15 16 26 C -0.11 0.22 4.86 -26.71 -0.13 0.09 16 27 H 0.05 -0.06 8.14 -51.93 -0.42 -0.49 16 28 H 0.06 -0.09 6.43 -51.93 -0.33 -0.43 16 29 H 0.05 -0.06 8.14 -51.93 -0.42 -0.48 16 30 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 31 H 0.05 -0.05 8.14 -51.93 -0.42 -0.47 16 32 H 0.05 -0.04 8.14 -51.93 -0.42 -0.47 16 33 H 0.06 -0.06 6.43 -51.93 -0.33 -0.39 16 34 H 0.07 -0.06 6.43 -51.93 -0.33 -0.39 16 35 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 36 H 0.07 0.12 8.14 -51.93 -0.42 -0.31 16 37 H 0.06 -0.05 8.14 -51.93 -0.42 -0.47 16 38 H 0.39 -1.40 7.66 -40.82 -0.31 -1.71 16 39 H 0.16 0.23 8.06 -52.48 -0.42 -0.19 16 40 H 0.13 -0.22 8.06 -52.48 -0.42 -0.64 16 41 H 0.13 -0.29 4.82 -52.49 -0.25 -0.54 16 42 H 0.11 -0.02 7.96 -51.93 -0.41 -0.43 16 43 H 0.38 -1.48 8.70 45.56 0.40 -1.08 16 44 H -0.26 -0.52 7.11 56.52 0.40 -0.12 16 45 H -0.26 -0.28 7.11 56.52 0.40 0.12 16 46 H 0.13 -0.06 8.06 -52.48 -0.42 -0.48 16 47 H 0.42 -1.49 8.12 -40.82 -0.33 -1.82 16 48 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 49 H 0.07 -0.20 8.14 -51.93 -0.42 -0.62 16 50 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 51 H 0.07 -0.16 6.43 -51.93 -0.33 -0.50 16 LS Contribution 396.95 15.07 5.98 5.98 Total: 0.00 -7.14 396.95 -12.33 -19.47 By element: Atomic # 1 Polarization: -6.54 SS G_CDS: -8.18 Total: -14.72 kcal Atomic # 6 Polarization: 2.16 SS G_CDS: -4.38 Total: -2.22 kcal Atomic # 7 Polarization: 0.96 SS G_CDS: -0.32 Total: 0.64 kcal Atomic # 8 Polarization: -2.86 SS G_CDS: -0.36 Total: -3.22 kcal Atomic # 14 Polarization: -0.87 SS G_CDS: -5.06 Total: -5.93 kcal Total LS contribution 5.98 Total: 5.98 kcal Total: -7.14 -12.33 -19.47 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589126_13158378.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -13.488 kcal (2) G-P(sol) polarization free energy of solvation -7.139 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -20.627 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.328 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.467 kcal (6) G-S(sol) free energy of system = (1) + (5) -32.955 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds