Wall clock time and date at job start Sun Mar 7 2021 02:05:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 C 1.52997 * 109.47164 * 2 1 4 4 C 1.52999 * 109.46623 * 119.99900 * 2 1 3 5 5 H 1.09000 * 109.47486 * 299.99829 * 4 2 1 6 6 C 1.52997 * 109.47269 * 60.00164 * 4 2 1 7 7 C 1.53002 * 109.47415 * 179.97438 * 6 4 2 8 8 C 1.52996 * 109.46972 * 300.00140 * 7 6 4 9 9 H 1.09004 * 109.47552 * 299.99695 * 8 7 6 10 10 N 1.46500 * 109.46993 * 179.97438 * 8 7 6 11 11 C 1.34784 * 120.00313 * 154.99955 * 10 8 7 12 12 O 1.21516 * 119.99203 * 359.97438 * 11 10 8 13 13 C 1.48161 * 120.00160 * 180.02562 * 11 10 8 14 14 N 1.32720 * 119.72446 * 359.97438 * 13 11 10 15 15 C 1.31518 * 121.64396 * 180.02562 * 14 13 11 16 16 C 1.38569 * 120.90417 * 0.02562 * 15 14 13 17 17 C 1.50695 * 120.32522 * 179.97438 * 16 15 14 18 18 O 1.42896 * 109.47362 * 245.00363 * 17 16 15 19 19 Si 1.86305 * 109.47258 * 5.00697 * 17 16 15 20 20 C 1.38618 * 119.34914 * 359.97438 * 16 15 14 21 21 C 1.38597 * 118.49160 * 359.72947 * 20 16 15 22 22 C 1.53000 * 109.47518 * 59.99713 * 8 7 6 23 23 C 1.52993 * 109.47165 * 300.00244 * 22 8 7 24 24 H 1.09001 * 109.47002 * 59.99738 * 1 2 3 25 25 H 1.08993 * 109.46955 * 180.02562 * 1 2 3 26 26 H 1.09000 * 109.47050 * 300.00004 * 1 2 3 27 27 H 1.09000 * 109.47050 * 239.99996 * 2 1 3 28 28 H 1.09000 * 109.47140 * 60.00051 * 3 2 1 29 29 H 1.09001 * 109.47230 * 179.97438 * 3 2 1 30 30 H 1.09001 * 109.47375 * 300.00034 * 3 2 1 31 31 H 1.09002 * 109.47497 * 299.99829 * 6 4 2 32 32 H 1.09000 * 109.47140 * 59.99453 * 6 4 2 33 33 H 1.09000 * 109.46986 * 59.99882 * 7 6 4 34 34 H 1.08996 * 109.47407 * 179.97438 * 7 6 4 35 35 H 0.97001 * 119.99882 * 334.99952 * 10 8 7 36 36 H 1.08001 * 119.55453 * 180.02562 * 15 14 13 37 37 H 1.08997 * 109.47248 * 124.99894 * 17 16 15 38 38 H 0.96701 * 113.99645 * 60.00399 * 18 17 16 39 39 H 1.48497 * 110.00262 * 179.97438 * 19 17 16 40 40 H 1.48508 * 109.99713 * 301.31731 * 19 17 16 41 41 H 1.08000 * 120.75812 * 179.97438 * 20 16 15 42 42 H 1.07997 * 120.47236 * 180.28883 * 21 20 16 43 43 H 1.09004 * 109.46724 * 59.99475 * 22 8 7 44 44 H 1.08992 * 109.47132 * 179.97438 * 22 8 7 45 45 H 1.09000 * 109.46925 * 299.99717 * 23 22 8 46 46 H 1.08996 * 109.47340 * 180.02562 * 23 22 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 6 2.0401 1.4425 0.0000 4 6 2.0399 -0.7212 1.2493 5 1 1.6766 -0.2074 2.1393 6 6 1.5299 -2.1637 1.2493 7 6 2.0403 -2.8852 2.4983 8 6 3.5703 -2.8852 2.4977 9 1 3.9334 -3.3989 1.6076 10 7 4.0590 -3.5755 3.6939 11 6 5.2810 -4.1441 3.6920 12 8 5.9771 -4.0845 2.6978 13 6 5.7750 -4.8427 4.9016 14 7 5.0098 -4.9048 5.9842 15 6 5.4106 -5.5147 7.0784 16 6 6.6562 -6.1186 7.1409 17 6 7.1025 -6.8134 8.4015 18 8 8.2241 -6.1222 8.9548 19 14 5.7063 -6.8192 9.6350 20 6 7.4877 -6.0774 6.0326 21 6 7.0366 -5.4333 4.8913 22 6 4.0804 -1.4427 2.4977 23 6 3.5700 -0.7213 1.2489 24 1 -0.3633 0.5139 -0.8900 25 1 -0.3633 -1.0276 0.0005 26 1 -0.3633 0.5138 0.8900 27 1 1.8934 -0.5138 -0.8900 28 1 1.6767 1.9563 0.8900 29 1 3.1301 1.4425 0.0005 30 1 1.6767 1.9563 -0.8900 31 1 0.4399 -2.1638 1.2492 32 1 1.8933 -2.6775 0.3593 33 1 1.6773 -2.3715 3.3884 34 1 1.6766 -3.9127 2.4985 35 1 3.5031 -3.6233 4.4874 36 1 4.7602 -5.5453 7.9400 37 1 7.3866 -7.8398 8.1696 38 1 8.0434 -5.2007 9.1856 39 1 6.1335 -7.5021 10.8825 40 1 5.2884 -5.4262 9.9356 41 1 8.4632 -6.5402 6.0564 42 1 7.6562 -5.3861 4.0079 43 1 3.7173 -0.9290 3.3879 44 1 5.1703 -1.4428 2.4978 45 1 3.9330 -1.2350 0.3587 46 1 3.9337 0.3062 1.2486 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14589126_13287726.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:05:57 Heat of formation + Delta-G solvation = -54.599864 kcal Electronic energy + Delta-G solvation = -24949.429600 eV Core-core repulsion = 21418.368392 eV Total energy + Delta-G solvation = -3531.061207 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 305.178 amu Computer time = 0.60 seconds Orbital eigenvalues (eV) -41.89273 -40.77726 -39.56075 -38.08078 -36.67055 -34.39759 -33.53769 -32.96056 -31.93715 -29.68716 -28.06269 -27.64953 -25.09107 -24.46397 -23.48359 -23.29149 -21.64074 -21.23148 -20.65562 -19.16727 -18.73863 -17.89373 -17.06858 -16.74981 -16.60578 -16.27500 -16.09911 -15.92964 -15.37841 -15.20238 -15.09150 -14.72884 -14.53985 -14.43514 -14.33104 -14.22356 -14.09736 -13.51861 -13.40066 -13.12712 -12.80535 -12.72343 -12.68467 -12.29850 -12.15549 -12.11959 -12.06457 -11.65252 -11.38018 -11.32741 -11.10537 -11.05331 -10.94174 -10.79495 -10.60158 -10.34931 -9.96126 -5.11690 -0.57505 0.04720 1.07382 1.43211 1.65722 1.82229 2.03913 2.70083 2.94349 3.16328 3.40958 3.59641 3.64881 3.66697 3.70276 3.80740 3.90398 3.99275 4.09982 4.13550 4.28746 4.30533 4.33015 4.37327 4.49602 4.52400 4.52931 4.62067 4.64239 4.77318 4.78423 4.82791 4.94373 4.96134 4.97952 5.02174 5.06990 5.12266 5.16784 5.18158 5.26359 5.34400 5.34673 5.35842 5.50046 5.53645 5.59846 6.19088 6.36101 6.65294 7.18522 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C -0.093 4.093 3 C -0.151 4.151 4 C -0.084 4.084 5 H 0.071 0.929 6 C -0.113 4.113 7 C -0.126 4.126 8 C 0.144 3.856 9 H 0.090 0.910 10 N -0.707 5.707 11 C 0.572 3.428 12 O -0.529 6.529 13 C 0.082 3.918 14 N -0.453 5.453 15 C 0.101 3.899 16 C -0.149 4.149 17 C -0.074 4.074 18 O -0.526 6.526 19 Si 0.687 3.313 20 C -0.053 4.053 21 C -0.109 4.109 22 C -0.129 4.129 23 C -0.113 4.113 24 H 0.053 0.947 25 H 0.057 0.943 26 H 0.054 0.946 27 H 0.070 0.930 28 H 0.053 0.947 29 H 0.057 0.943 30 H 0.053 0.947 31 H 0.072 0.928 32 H 0.066 0.934 33 H 0.069 0.931 34 H 0.070 0.930 35 H 0.411 0.589 36 H 0.164 0.836 37 H 0.125 0.875 38 H 0.378 0.622 39 H -0.251 1.251 40 H -0.255 1.255 41 H 0.147 0.853 42 H 0.152 0.848 43 H 0.064 0.936 44 H 0.067 0.933 45 H 0.065 0.935 46 H 0.069 0.931 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.334 -0.792 1.528 3.752 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.208 4.208 2 C -0.111 4.111 3 C -0.208 4.208 4 C -0.102 4.102 5 H 0.090 0.910 6 C -0.150 4.150 7 C -0.164 4.164 8 C 0.040 3.960 9 H 0.108 0.892 10 N -0.357 5.357 11 C 0.357 3.643 12 O -0.404 6.404 13 C -0.056 4.056 14 N -0.164 5.164 15 C -0.058 4.058 16 C -0.152 4.152 17 C -0.184 4.184 18 O -0.332 6.332 19 Si 0.587 3.413 20 C -0.078 4.078 21 C -0.129 4.129 22 C -0.168 4.168 23 C -0.151 4.151 24 H 0.072 0.928 25 H 0.076 0.924 26 H 0.073 0.927 27 H 0.088 0.912 28 H 0.073 0.927 29 H 0.076 0.924 30 H 0.072 0.928 31 H 0.091 0.909 32 H 0.084 0.916 33 H 0.088 0.912 34 H 0.089 0.911 35 H 0.247 0.753 36 H 0.181 0.819 37 H 0.143 0.857 38 H 0.226 0.774 39 H -0.176 1.176 40 H -0.180 1.180 41 H 0.165 0.835 42 H 0.170 0.830 43 H 0.083 0.917 44 H 0.086 0.914 45 H 0.084 0.916 46 H 0.088 0.912 Dipole moment (debyes) X Y Z Total from point charges -3.662 -0.658 1.438 3.989 hybrid contribution 1.369 0.510 0.547 1.560 sum -2.293 -0.148 1.985 3.036 Atomic orbital electron populations 1.21910 0.95241 1.01855 1.01775 1.21142 0.95735 0.96204 0.98017 1.21909 1.01237 0.95919 1.01748 1.21258 0.95195 0.95527 0.98262 0.91043 1.21602 1.00901 0.95136 0.97405 1.21807 0.93606 1.01457 0.99528 1.21103 0.93966 0.92747 0.88207 0.89195 1.45940 1.17266 1.55142 1.17401 1.17857 0.81892 0.78411 0.86175 1.90815 1.56452 1.59828 1.33351 1.21215 0.92579 0.98718 0.93134 1.67534 1.34628 1.15072 0.99186 1.22679 0.93738 0.93489 0.95887 1.21577 0.95990 0.99905 0.97685 1.25015 0.98342 0.98610 0.96439 1.86640 1.34737 1.28984 1.82833 0.94971 0.82174 0.84188 0.79975 1.21565 0.99829 0.95427 0.91018 1.22235 0.95750 0.95228 0.99737 1.21920 1.01248 0.94794 0.98789 1.21611 0.95047 1.00718 0.97751 0.92776 0.92365 0.92732 0.91195 0.92746 0.92354 0.92772 0.90936 0.91570 0.91217 0.91123 0.75332 0.81911 0.85737 0.77435 1.17586 1.17960 0.83488 0.82984 0.91724 0.91429 0.91646 0.91225 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.15 8.84 37.16 0.33 0.48 16 2 C -0.09 0.08 2.51 -90.62 -0.23 -0.15 16 3 C -0.15 0.10 8.84 37.16 0.33 0.43 16 4 C -0.08 0.09 1.78 -90.62 -0.16 -0.07 16 5 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 6 C -0.11 0.15 4.85 -26.73 -0.13 0.02 16 7 C -0.13 0.17 5.39 -26.73 -0.14 0.02 16 8 C 0.14 0.06 2.45 -67.93 -0.17 -0.11 16 9 H 0.09 0.19 7.58 -51.93 -0.39 -0.20 16 10 N -0.71 -0.64 5.07 -54.65 -0.28 -0.92 16 11 C 0.57 1.79 7.78 -12.18 -0.09 1.70 16 12 O -0.53 -3.17 15.99 5.35 0.09 -3.08 16 13 C 0.08 0.16 6.75 -83.01 -0.56 -0.40 16 14 N -0.45 -0.46 9.54 -9.80 -0.09 -0.55 16 15 C 0.10 -0.07 9.84 -17.56 -0.17 -0.25 16 16 C -0.15 0.16 5.37 -104.36 -0.56 -0.40 16 17 C -0.07 0.14 2.82 36.00 0.10 0.25 16 18 O -0.53 0.18 12.84 -35.23 -0.45 -0.27 16 19 Si 0.69 -1.80 29.91 -169.99 -5.08 -6.88 16 20 C -0.05 0.03 9.83 -39.31 -0.39 -0.36 16 21 C -0.11 -0.11 9.63 -39.05 -0.38 -0.48 16 22 C -0.13 -0.06 5.49 -26.73 -0.15 -0.21 16 23 C -0.11 0.04 4.85 -26.73 -0.13 -0.09 16 24 H 0.05 -0.04 8.14 -51.93 -0.42 -0.46 16 25 H 0.06 -0.07 6.43 -51.93 -0.33 -0.41 16 26 H 0.05 -0.05 8.14 -51.93 -0.42 -0.47 16 27 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 28 H 0.05 -0.03 8.14 -51.93 -0.42 -0.45 16 29 H 0.06 -0.04 6.43 -51.93 -0.33 -0.37 16 30 H 0.05 -0.03 8.14 -51.93 -0.42 -0.45 16 31 H 0.07 -0.12 6.43 -51.93 -0.33 -0.46 16 32 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 33 H 0.07 -0.12 8.14 -51.93 -0.42 -0.55 16 34 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 35 H 0.41 -0.19 7.93 -40.82 -0.32 -0.51 16 36 H 0.16 -0.47 4.86 -52.49 -0.25 -0.73 16 37 H 0.12 -0.35 7.96 -51.93 -0.41 -0.77 16 38 H 0.38 -1.16 8.70 45.56 0.40 -0.76 16 39 H -0.25 -0.21 7.11 56.52 0.40 0.19 16 40 H -0.25 0.22 7.01 56.52 0.40 0.62 16 41 H 0.15 -0.28 8.06 -52.49 -0.42 -0.70 16 42 H 0.15 0.11 7.64 -52.49 -0.40 -0.30 16 43 H 0.06 0.01 8.14 -51.93 -0.42 -0.41 16 44 H 0.07 0.16 8.14 -51.93 -0.42 -0.26 16 45 H 0.06 0.02 8.14 -51.93 -0.42 -0.41 16 46 H 0.07 -0.02 6.43 -51.93 -0.33 -0.36 16 LS Contribution 360.62 15.07 5.43 5.43 Total: 0.00 -5.72 360.62 -10.31 -16.03 By element: Atomic # 1 Polarization: -2.72 SS G_CDS: -7.42 Total: -10.14 kcal Atomic # 6 Polarization: 2.88 SS G_CDS: -2.50 Total: 0.38 kcal Atomic # 7 Polarization: -1.10 SS G_CDS: -0.37 Total: -1.47 kcal Atomic # 8 Polarization: -2.99 SS G_CDS: -0.37 Total: -3.35 kcal Atomic # 14 Polarization: -1.80 SS G_CDS: -5.08 Total: -6.88 kcal Total LS contribution 5.43 Total: 5.43 kcal Total: -5.72 -10.31 -16.03 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589126_13287726.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -38.568 kcal (2) G-P(sol) polarization free energy of solvation -5.724 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -44.292 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.308 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.032 kcal (6) G-S(sol) free energy of system = (1) + (5) -54.600 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.60 seconds