Wall clock time and date at job start Sun Mar 7 2021 02:06:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 C 1.53002 * 109.46637 * 2 1 4 4 C 1.53000 * 109.46886 * 119.99695 * 2 1 3 5 5 H 1.09002 * 109.47398 * 300.00496 * 4 2 1 6 6 C 1.53002 * 109.47233 * 60.00670 * 4 2 1 7 7 C 1.52997 * 109.47415 * 179.97438 * 6 4 2 8 8 C 1.53002 * 109.46978 * 300.00098 * 7 6 4 9 9 H 1.09002 * 109.46838 * 299.99316 * 8 7 6 10 10 N 1.46497 * 109.46729 * 179.97438 * 8 7 6 11 11 C 1.34778 * 119.99664 * 155.00120 * 10 8 7 12 12 O 1.21622 * 120.00593 * 359.97438 * 11 10 8 13 13 C 1.47272 * 119.99680 * 179.97438 * 11 10 8 14 14 C 1.36765 * 126.94407 * 0.02562 * 13 11 10 15 15 N 1.34659 * 108.39641 * 179.97438 * 14 13 11 16 16 C 1.46499 * 124.84669 * 180.02562 * 15 14 13 17 17 C 1.36442 * 110.29708 * 0.02562 * 15 14 13 18 18 C 1.50702 * 125.57010 * 180.02562 * 17 15 14 19 19 O 1.42897 * 109.47293 * 330.00619 * 18 17 15 20 20 Si 1.86300 * 109.47486 * 210.00029 * 18 17 15 21 21 C 1.34485 * 108.85821 * 359.74808 * 17 15 14 22 22 C 1.53002 * 109.47128 * 59.99726 * 8 7 6 23 23 C 1.52992 * 109.47106 * 300.00123 * 22 8 7 24 24 H 1.09000 * 109.47437 * 60.00474 * 1 2 3 25 25 H 1.09001 * 109.47109 * 179.97438 * 1 2 3 26 26 H 1.09002 * 109.47508 * 299.99876 * 1 2 3 27 27 H 1.08992 * 109.47514 * 240.00129 * 2 1 3 28 28 H 1.09000 * 109.46986 * 179.97438 * 3 2 1 29 29 H 1.08993 * 109.47662 * 299.99908 * 3 2 1 30 30 H 1.09002 * 109.47075 * 60.00414 * 3 2 1 31 31 H 1.09000 * 109.46986 * 299.99797 * 6 4 2 32 32 H 1.09002 * 109.47075 * 59.99068 * 6 4 2 33 33 H 1.09002 * 109.47045 * 59.99931 * 7 6 4 34 34 H 1.08998 * 109.47171 * 179.97438 * 7 6 4 35 35 H 0.97000 * 120.00413 * 334.99384 * 10 8 7 36 36 H 1.08006 * 125.80040 * 359.97438 * 14 13 11 37 37 H 1.09005 * 109.46491 * 89.98320 * 16 15 14 38 38 H 1.09004 * 109.46778 * 209.97493 * 16 15 14 39 39 H 1.08989 * 109.47907 * 329.98054 * 16 15 14 40 40 H 1.09003 * 109.46822 * 90.00133 * 18 17 15 41 41 H 0.96700 * 113.99816 * 299.99625 * 19 18 17 42 42 H 1.48500 * 110.00197 * 180.02562 * 20 18 17 43 43 H 1.48500 * 109.99923 * 301.32416 * 20 18 17 44 44 H 1.07998 * 126.83456 * 180.24868 * 21 17 15 45 45 H 1.09002 * 109.47070 * 60.00059 * 22 8 7 46 46 H 1.08996 * 109.46550 * 179.97438 * 22 8 7 47 47 H 1.09002 * 109.47103 * 299.99915 * 23 22 8 48 48 H 1.08998 * 109.46862 * 180.02562 * 23 22 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4426 0.0000 4 6 2.0399 -0.7212 1.2493 5 1 1.6765 -0.2074 2.1393 6 6 1.5301 -2.1638 1.2493 7 6 2.0405 -2.8852 2.4982 8 6 3.5705 -2.8850 2.4977 9 1 3.9336 -3.3988 1.6076 10 7 4.0592 -3.5753 3.6939 11 6 5.2812 -4.1437 3.6919 12 8 5.9781 -4.0841 2.6969 13 6 5.7727 -4.8371 4.8946 14 6 5.1131 -4.9893 6.0830 15 7 5.9049 -5.6829 6.9227 16 6 5.5507 -6.0496 8.2962 17 6 7.0842 -5.9953 6.3117 18 6 8.2184 -6.7659 6.9371 19 8 8.2333 -6.5317 8.3466 20 14 9.8332 -6.2044 6.1970 21 6 7.0666 -5.5085 5.0582 22 6 4.0804 -1.4425 2.4977 23 6 3.5699 -0.7211 1.2488 24 1 -0.3634 0.5137 -0.8900 25 1 -0.3633 -1.0277 -0.0005 26 1 -0.3634 0.5138 0.8900 27 1 1.8934 -0.5138 -0.8899 28 1 3.1299 1.4426 0.0005 29 1 1.6766 1.9564 -0.8899 30 1 1.6766 1.9563 0.8900 31 1 0.4401 -2.1638 1.2492 32 1 1.8934 -2.6775 0.3593 33 1 1.6774 -2.3715 3.3884 34 1 1.6769 -3.9127 2.4984 35 1 3.5034 -3.6231 4.4874 36 1 4.1250 -4.6166 6.3094 37 1 5.0534 -7.0196 8.2964 38 1 6.4551 -6.1048 8.9022 39 1 4.8803 -5.2974 8.7117 40 1 8.0824 -7.8306 6.7471 41 1 8.3510 -5.6032 8.5898 42 1 10.9596 -6.9572 6.8050 43 1 9.8181 -6.4133 4.7269 44 1 7.8500 -5.5934 4.3196 45 1 3.7173 -0.9288 3.3879 46 1 5.1704 -1.4425 2.4978 47 1 3.9330 -1.2348 0.3586 48 1 3.9336 0.3064 1.2486 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_14589126_13287730.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 02:06:01 Heat of formation + Delta-G solvation = -40.550945 kcal Electronic energy + Delta-G solvation = -25736.927919 eV Core-core repulsion = 22179.164440 eV Total energy + Delta-G solvation = -3557.763479 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 307.193 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -42.46225 -40.78415 -39.37137 -37.91178 -36.49388 -34.08493 -33.68181 -31.88733 -31.49733 -29.41697 -28.04129 -27.53886 -26.28660 -24.34350 -23.42927 -22.92248 -21.23746 -20.87788 -20.72677 -20.32103 -18.99273 -17.51231 -17.09154 -16.91794 -16.80874 -16.16830 -15.82174 -15.55307 -15.39850 -15.30605 -15.08671 -14.95783 -14.66024 -14.42122 -14.30765 -14.16863 -14.01086 -13.49851 -13.39876 -13.33590 -13.12570 -13.09798 -12.74106 -12.62010 -12.23304 -12.19880 -12.07241 -12.02674 -11.95576 -11.60810 -11.32252 -11.13159 -10.90386 -10.77387 -10.60931 -9.87531 -9.53042 -9.20017 -5.01208 0.80075 1.05562 1.40554 1.64914 1.86570 2.04531 2.37361 2.75378 3.12080 3.52671 3.68552 3.69906 3.77655 3.79348 3.83392 4.02823 4.14612 4.18529 4.26056 4.32838 4.34464 4.35710 4.42574 4.46756 4.54769 4.57857 4.60485 4.65542 4.69696 4.79282 4.82362 4.91245 4.98189 5.00593 5.01213 5.05923 5.11207 5.18783 5.21046 5.23073 5.30965 5.38997 5.41805 5.53731 5.61748 5.65540 5.74972 5.97723 6.15925 6.29021 6.74618 7.54572 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C -0.093 4.093 3 C -0.151 4.151 4 C -0.083 4.083 5 H 0.070 0.930 6 C -0.113 4.113 7 C -0.126 4.126 8 C 0.148 3.852 9 H 0.088 0.912 10 N -0.729 5.729 11 C 0.591 3.409 12 O -0.542 6.542 13 C -0.226 4.226 14 C 0.050 3.950 15 N -0.424 5.424 16 C 0.049 3.951 17 C -0.021 4.021 18 C -0.042 4.042 19 O -0.542 6.542 20 Si 0.716 3.284 21 C -0.136 4.136 22 C -0.128 4.128 23 C -0.114 4.114 24 H 0.053 0.947 25 H 0.057 0.943 26 H 0.053 0.947 27 H 0.069 0.931 28 H 0.058 0.942 29 H 0.053 0.947 30 H 0.053 0.947 31 H 0.070 0.930 32 H 0.065 0.935 33 H 0.067 0.933 34 H 0.068 0.932 35 H 0.395 0.605 36 H 0.170 0.830 37 H 0.072 0.928 38 H 0.114 0.886 39 H 0.081 0.919 40 H 0.118 0.882 41 H 0.381 0.619 42 H -0.252 1.252 43 H -0.251 1.251 44 H 0.151 0.849 45 H 0.062 0.938 46 H 0.068 0.932 47 H 0.064 0.936 48 H 0.068 0.932 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.069 2.238 5.047 6.316 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.208 4.208 2 C -0.111 4.111 3 C -0.208 4.208 4 C -0.102 4.102 5 H 0.089 0.911 6 C -0.151 4.151 7 C -0.164 4.164 8 C 0.043 3.957 9 H 0.106 0.894 10 N -0.380 5.380 11 C 0.380 3.620 12 O -0.420 6.420 13 C -0.236 4.236 14 C -0.087 4.087 15 N -0.098 5.098 16 C -0.091 4.091 17 C -0.130 4.130 18 C -0.153 4.153 19 O -0.348 6.348 20 Si 0.615 3.385 21 C -0.161 4.161 22 C -0.167 4.167 23 C -0.152 4.152 24 H 0.072 0.928 25 H 0.076 0.924 26 H 0.072 0.928 27 H 0.088 0.912 28 H 0.077 0.923 29 H 0.072 0.928 30 H 0.072 0.928 31 H 0.089 0.911 32 H 0.084 0.916 33 H 0.085 0.915 34 H 0.086 0.914 35 H 0.229 0.771 36 H 0.187 0.813 37 H 0.091 0.909 38 H 0.132 0.868 39 H 0.100 0.900 40 H 0.135 0.865 41 H 0.229 0.771 42 H -0.177 1.177 43 H -0.175 1.175 44 H 0.169 0.831 45 H 0.081 0.919 46 H 0.087 0.913 47 H 0.083 0.917 48 H 0.087 0.913 Dipole moment (debyes) X Y Z Total from point charges -1.989 1.281 4.236 4.852 hybrid contribution -1.102 -0.417 0.458 1.265 sum -3.091 0.864 4.694 5.686 Atomic orbital electron populations 1.21908 0.95296 1.01818 1.01739 1.21145 0.95683 0.96227 0.98080 1.21906 1.01278 0.95898 1.01708 1.21248 0.95302 0.95451 0.98155 0.91126 1.21600 1.00763 0.95207 0.97511 1.21805 0.94057 1.01181 0.99329 1.20976 0.93445 0.92651 0.88598 0.89414 1.45921 1.17844 1.57490 1.16724 1.17399 0.80738 0.77278 0.86624 1.90782 1.56378 1.60258 1.34537 1.20330 0.97788 1.11126 0.94381 1.21927 0.97019 0.99583 0.90133 1.43478 1.12619 1.41452 1.12293 1.22569 1.04686 1.01722 0.80168 1.20740 0.89839 1.07829 0.94581 1.24840 1.03796 1.01824 0.84812 1.86447 1.95318 1.32299 1.20741 0.94070 0.74341 0.90053 0.80009 1.21729 0.97715 1.01462 0.95166 1.21912 1.01375 0.94914 0.98454 1.21613 0.94921 1.00699 0.97947 0.92800 0.92405 0.92754 0.91205 0.92314 0.92799 0.92764 0.91095 0.91603 0.91474 0.91352 0.77119 0.81296 0.90887 0.86791 0.89998 0.86511 0.77111 1.17674 1.17487 0.83101 0.91940 0.91319 0.91700 0.91303 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.12 8.84 37.16 0.33 0.45 16 2 C -0.09 0.06 2.51 -90.62 -0.23 -0.17 16 3 C -0.15 0.08 8.84 37.16 0.33 0.40 16 4 C -0.08 0.07 1.78 -90.62 -0.16 -0.09 16 5 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 6 C -0.11 0.12 4.85 -26.73 -0.13 -0.01 16 7 C -0.13 0.16 5.39 -26.73 -0.14 0.01 16 8 C 0.15 0.11 2.45 -67.93 -0.17 -0.06 16 9 H 0.09 0.27 7.58 -51.93 -0.39 -0.12 16 10 N -0.73 -0.45 5.07 -54.93 -0.28 -0.73 16 11 C 0.59 2.35 7.77 -12.59 -0.10 2.26 16 12 O -0.54 -4.40 16.63 5.26 0.09 -4.31 16 13 C -0.23 -0.56 6.29 -103.35 -0.65 -1.21 16 14 C 0.05 -0.02 10.83 -16.84 -0.18 -0.21 16 15 N -0.42 0.26 3.09 -119.90 -0.37 -0.11 16 16 C 0.05 -0.16 10.71 59.85 0.64 0.48 16 17 C -0.02 -0.01 6.13 -81.87 -0.50 -0.51 16 18 C -0.04 0.03 2.98 36.01 0.11 0.14 16 19 O -0.54 0.99 9.95 -35.23 -0.35 0.64 16 20 Si 0.72 -0.70 31.31 -169.99 -5.32 -6.03 16 21 C -0.14 -0.37 9.50 -37.50 -0.36 -0.72 16 22 C -0.13 -0.10 5.49 -26.73 -0.15 -0.24 16 23 C -0.11 0.00 4.85 -26.74 -0.13 -0.13 16 24 H 0.05 -0.03 8.14 -51.93 -0.42 -0.45 16 25 H 0.06 -0.06 6.43 -51.93 -0.33 -0.39 16 26 H 0.05 -0.04 8.14 -51.93 -0.42 -0.46 16 27 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 28 H 0.06 -0.03 6.43 -51.93 -0.33 -0.36 16 29 H 0.05 -0.02 8.14 -51.93 -0.42 -0.44 16 30 H 0.05 -0.03 8.14 -51.93 -0.42 -0.45 16 31 H 0.07 -0.10 6.43 -51.93 -0.33 -0.44 16 32 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 33 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 34 H 0.07 -0.08 8.14 -51.93 -0.42 -0.51 16 35 H 0.40 -0.89 7.55 -40.82 -0.31 -1.20 16 36 H 0.17 -0.67 7.45 -52.48 -0.39 -1.06 16 37 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 38 H 0.11 -0.41 4.93 -51.93 -0.26 -0.67 16 39 H 0.08 -0.41 8.13 -51.94 -0.42 -0.83 16 40 H 0.12 -0.03 7.96 -51.93 -0.41 -0.45 16 41 H 0.38 -2.02 8.38 45.56 0.38 -1.64 16 42 H -0.25 -0.42 7.11 56.52 0.40 -0.01 16 43 H -0.25 -0.49 6.77 56.52 0.38 -0.11 16 44 H 0.15 0.49 6.68 -52.49 -0.35 0.14 16 45 H 0.06 0.01 8.14 -51.93 -0.42 -0.42 16 46 H 0.07 0.20 8.14 -51.93 -0.42 -0.22 16 47 H 0.06 0.05 8.14 -51.93 -0.42 -0.37 16 48 H 0.07 0.00 6.43 -51.93 -0.33 -0.34 16 LS Contribution 369.36 15.07 5.57 5.57 Total: 0.00 -7.58 369.36 -10.36 -17.94 By element: Atomic # 1 Polarization: -5.15 SS G_CDS: -8.20 Total: -13.35 kcal Atomic # 6 Polarization: 1.87 SS G_CDS: -1.49 Total: 0.39 kcal Atomic # 7 Polarization: -0.18 SS G_CDS: -0.65 Total: -0.83 kcal Atomic # 8 Polarization: -3.41 SS G_CDS: -0.26 Total: -3.68 kcal Atomic # 14 Polarization: -0.70 SS G_CDS: -5.32 Total: -6.03 kcal Total LS contribution 5.57 Total: 5.57 kcal Total: -7.58 -10.36 -17.94 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_14589126_13287730.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -22.614 kcal (2) G-P(sol) polarization free energy of solvation -7.581 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -30.195 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.356 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.937 kcal (6) G-S(sol) free energy of system = (1) + (5) -40.551 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.69 seconds